gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 173 |
| AfaI | GTAC | 2 cut(s) | 326, 396 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 358 |
| AgsI | TTSAA | 4 cut(s) | 172, 311, 403, 466 |
| AjnI | CCWGG | 1 cut(s) | 357 |
| AluBI | AGCT | 1 cut(s) | 112 |
| AluI | AGCT | 1 cut(s) | 112 |
| ApeKI | GCWGC | 1 cut(s) | 427 |
| ApoI | RAATTY | 1 cut(s) | 173 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| BbvI | GCAGC | 1 cut(s) | 439 |
| BccI | CCATC | 1 cut(s) | 98 |
| BciT130I | CCWGG | 1 cut(s) | 359 |
| BfaI | CTAG | 2 cut(s) | 42, 383 |
| BisI | GCNGC | 1 cut(s) | 428 |
| BlsI | GCNGC | 1 cut(s) | 429 |
| BmcAI | AGTACT | 1 cut(s) | 396 |
| Bme1390I | CCNGG | 1 cut(s) | 359 |
| BmrFI | CCNGG | 1 cut(s) | 359 |
| BmsI | GCATC | 1 cut(s) | 253 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 434, 464 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 358 |
| Bse3DI | GCAATG | 2 cut(s) | 291, 422 |
| BseBI | CCWGG | 1 cut(s) | 359 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 358 |
| BseMI | GCAATG | 2 cut(s) | 291, 422 |
| BseXI | GCAGC | 1 cut(s) | 439 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 358 |
| BsrDI | GCAATG | 2 cut(s) | 291, 422 |
| Bst2UI | CCWGG | 1 cut(s) | 359 |
| Bst4CI | ACNGT | 2 cut(s) | 152, 240 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 356 |
| BstNI | CCWGG | 1 cut(s) | 359 |
| BstSCI | CCNGG | 1 cut(s) | 357 |
| BstV1I | GCAGC | 1 cut(s) | 439 |
| BtsI | GCAGTG | 1 cut(s) | 343 |
| BtsIMutI | CAGTG | 1 cut(s) | 343 |
| Csp6I | GTAC | 2 cut(s) | 325, 395 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 186, 221 |
| CviAII | CATG | 1 cut(s) | 59 |
| CviJI | RGCY | 5 cut(s) | 40, 69, 112, 147, 221 |
| CviKI_1 | RGCY | 5 cut(s) | 40, 69, 112, 147, 221 |
| CviQI | GTAC | 2 cut(s) | 325, 395 |
| DraI | TTTAAA | 2 cut(s) | 19, 48 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 356 |
| EcoRII | CCWGG | 1 cut(s) | 357 |
| FaeI | CATG | 1 cut(s) | 62 |
| FaiI | YATR | 6 cut(s) | 25, 60, 93, 224, 231, 484 |
| FatI | CATG | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 1 cut(s) | 428 |
| Fsp4HI | GCNGC | 1 cut(s) | 428 |
| FspBI | CTAG | 2 cut(s) | 42, 383 |
| GluI | GCNGC | 1 cut(s) | 428 |
| Hin1II | CATG | 1 cut(s) | 62 |
| HindIII | AAGCTT | 1 cut(s) | 110 |
| HinfI | GANTC | 4 cut(s) | 116, 209, 403, 415 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy166II | GTNNAC | 1 cut(s) | 325 |
| Hpy188I | TCNGA | 1 cut(s) | 420 |
| Hpy188III | TCNNGA | 1 cut(s) | 383 |
| Hpy8I | GTNNAC | 1 cut(s) | 325 |
| HpyAV | CCTTC | 1 cut(s) | 460 |
| HpyCH4III | ACNGT | 2 cut(s) | 152, 240 |
| HpyCH4V | TGCA | 8 cut(s) | 254, 266, 289, 336, 366, 427, 453, 478 |
| Hsp92II | CATG | 1 cut(s) | 62 |
| LpnPI | CCDG | 2 cut(s) | 344, 371 |
| Lsp1109I | GCAGC | 1 cut(s) | 439 |
| LweI | GCATC | 1 cut(s) | 253 |
| MaeI | CTAG | 2 cut(s) | 42, 383 |
| MaeIII | GTNAC | 2 cut(s) | 32, 210 |
| MboII | GAAGA | 1 cut(s) | 323 |
| MluCI | AATT | 3 cut(s) | 20, 173, 373 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MmeI | TCCRAC | 1 cut(s) | 420 |
| MnlI | CCTC | 3 cut(s) | 73, 352, 362 |
| MseI | TTAA | 4 cut(s) | 18, 47, 411, 473 |
| MslI | CAYNNNNRTG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 359 |
| MssI | GTTTAAAC | 1 cut(s) | 48 |
| MvaI | CCWGG | 1 cut(s) | 359 |
| NlaIII | CATG | 1 cut(s) | 62 |
| NmuCI | GTSAC | 1 cut(s) | 210 |
| PfeI | GAWTC | 3 cut(s) | 116, 403, 415 |
| PkrI | GCNGC | 1 cut(s) | 429 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PmeI | GTTTAAAC | 1 cut(s) | 48 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| Psp6I | CCWGG | 1 cut(s) | 357 |
| PspGI | CCWGG | 1 cut(s) | 357 |
| RsaI | GTAC | 2 cut(s) | 326, 396 |
| RsaNI | GTAC | 2 cut(s) | 325, 395 |
| RseI | CAYNNNNRTG | 1 cut(s) | 57 |
| SaqAI | TTAA | 4 cut(s) | 18, 47, 411, 473 |
| SatI | GCNGC | 1 cut(s) | 428 |
| ScaI | AGTACT | 1 cut(s) | 396 |
| SchI | GAGTC | 1 cut(s) | 218 |
| ScrFI | CCNGG | 1 cut(s) | 359 |
| SetI | ASST | 5 cut(s) | 84, 114, 169, 282, 471 |
| SfaNI | GCATC | 1 cut(s) | 253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 57 |
| Sse9I | AATT | 3 cut(s) | 20, 173, 373 |
| SspMI | CTAG | 2 cut(s) | 42, 383 |
| StyD4I | CCNGG | 1 cut(s) | 357 |
| TaaI | ACNGT | 2 cut(s) | 152, 240 |
| TasI | AATT | 3 cut(s) | 20, 173, 373 |
| TatI | WGTACW | 1 cut(s) | 394 |
| TfiI | GAWTC | 3 cut(s) | 116, 403, 415 |
| Tru1I | TTAA | 4 cut(s) | 18, 47, 411, 473 |
| Tru9I | TTAA | 4 cut(s) | 18, 47, 411, 473 |
| TscAI | CASTG | 1 cut(s) | 343 |
| TseFI | GTSAC | 1 cut(s) | 210 |
| TseI | GCWGC | 1 cut(s) | 427 |
| Tsp45I | GTSAC | 1 cut(s) | 210 |
| TspDTI | ATGAA | 5 cut(s) | 80, 130, 249, 405, 461 |
| TspRI | CASTG | 1 cut(s) | 343 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 356 |
| XapI | RAATTY | 1 cut(s) | 173 |
| XbaI | TCTAGA | 1 cut(s) | 382 |
| XspI | CTAG | 2 cut(s) | 42, 383 |
| ZrmI | AGTACT | 1 cut(s) | 396 |