Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 44 - 109 | 3.3e-19 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AgsI | TTSAA | 5 cut(s) | 13, 56, 65, 184, 286 |
| AjnI | CCWGG | 1 cut(s) | 271 |
| AluBI | AGCT | 5 cut(s) | 9, 52, 71, 145, 205 |
| AluI | AGCT | 5 cut(s) | 9, 52, 71, 145, 205 |
| Alw26I | GTCTC | 1 cut(s) | 311 |
| BccI | CCATC | 1 cut(s) | 209 |
| BciT130I | CCWGG | 1 cut(s) | 273 |
| BcoDI | GTCTC | 1 cut(s) | 311 |
| Bme1390I | CCNGG | 1 cut(s) | 273 |
| BmrFI | CCNGG | 1 cut(s) | 273 |
| BpmI | CTGGAG | 1 cut(s) | 294 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| Bse1I | ACTGG | 2 cut(s) | 92, 302 |
| Bse3DI | GCAATG | 1 cut(s) | 40 |
| BseBI | CCWGG | 1 cut(s) | 273 |
| BseGI | GGATG | 2 cut(s) | 175, 220 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseMI | GCAATG | 1 cut(s) | 40 |
| BseNI | ACTGG | 2 cut(s) | 92, 302 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsmAI | GTCTC | 1 cut(s) | 311 |
| BsrDI | GCAATG | 1 cut(s) | 40 |
| BsrI | ACTGG | 2 cut(s) | 92, 302 |
| Bst2UI | CCWGG | 1 cut(s) | 273 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 39, 305 |
| BstC8I | GCNNGC | 1 cut(s) | 40 |
| BstF5I | GGATG | 2 cut(s) | 175, 220 |
| BstMAI | GTCTC | 1 cut(s) | 311 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 39, 305 |
| BstNI | CCWGG | 1 cut(s) | 273 |
| BstNSI | RCATGY | 1 cut(s) | 42 |
| BstSCI | CCNGG | 1 cut(s) | 271 |
| BtgZI | GCGATG | 1 cut(s) | 113 |
| BtsCI | GGATG | 2 cut(s) | 175, 220 |
| Cac8I | GCNNGC | 1 cut(s) | 40 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 228, 263 |
| CviAII | CATG | 3 cut(s) | 39, 138, 314 |
| CviJI | RGCY | 5 cut(s) | 9, 52, 71, 145, 205 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 52, 71, 145, 205 |
| EcoRII | CCWGG | 1 cut(s) | 271 |
| EcoT22I | ATGCAT | 1 cut(s) | 40 |
| FaeI | CATG | 3 cut(s) | 42, 141, 317 |
| FaiI | YATR | 6 cut(s) | 24, 40, 74, 139, 222, 315 |
| FatI | CATG | 3 cut(s) | 38, 137, 313 |
| FokI | GGATG | 2 cut(s) | 182, 227 |
| GsuI | CTGGAG | 1 cut(s) | 294 |
| Hin1II | CATG | 3 cut(s) | 42, 141, 317 |
| HindIII | AAGCTT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 5 cut(s) | 33, 38, 226, 299, 308 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 39, 305 |
| Hsp92II | CATG | 3 cut(s) | 42, 141, 317 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 5 cut(s) | 73, 171, 258, 285, 315 |
| MboII | GAAGA | 2 cut(s) | 77, 92 |
| MluCI | AATT | 1 cut(s) | 111 |
| MnlI | CCTC | 1 cut(s) | 100 |
| Mph1103I | ATGCAT | 1 cut(s) | 40 |
| MspR9I | CCNGG | 1 cut(s) | 273 |
| MvaI | CCWGG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 39, 305 |
| NlaIII | CATG | 3 cut(s) | 42, 141, 317 |
| NsiI | ATGCAT | 1 cut(s) | 40 |
| NspI | RCATGY | 1 cut(s) | 42 |
| PaeI | GCATGC | 1 cut(s) | 42 |
| Psp6I | CCWGG | 1 cut(s) | 271 |
| PspGI | CCWGG | 1 cut(s) | 271 |
| ScrFI | CCNGG | 1 cut(s) | 273 |
| SetI | ASST | 6 cut(s) | 11, 54, 73, 147, 207, 274 |
| SphI | GCATGC | 1 cut(s) | 42 |
| Sse9I | AATT | 1 cut(s) | 111 |
| StyD4I | CCNGG | 1 cut(s) | 271 |
| TasI | AATT | 1 cut(s) | 111 |
| TspDTI | ATGAA | 5 cut(s) | 30, 39, 89, 116, 303 |
| TspGWI | ACGGA | 1 cut(s) | 227 |
| XceI | RCATGY | 1 cut(s) | 42 |
| Zsp2I | ATGCAT | 1 cut(s) | 40 |