FvH4_6g12782
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000106
Physical Location & Seq
Reverse (-)
7749424 .. 7750251
828 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g12782.t1

Sequence Viewer

Length: 828 bp
ATGCCATCTATTTTCATTGGTTACCCATTCGGACAAAAAGGTTACAAGTTGTTTGATTTATCGACTAAAAAGGTCTTTACTAGTCGCGACGTCAAATTTCATGAGACCATCTTTCCTTATTCCTCTATTCAGCCCAGCCATATTCTCCCTTCCCAAGCCCACAAACCAGGCCCTCTTCCAATTTCTTCCTTCATTGACTTTTCTTTCACTCCTCCTTCTCATAATACACGTGCTTCTTCTTCTACTCCTACTCCAACACTCACAGAAAACACCACTTCCACTTCAGATCCTACACCTTCATCTCCAGACCCCGTCTCGTCTTCTCCGACTCCACCGCCGGCGCCACCCTCCCTTCTCCAATATTCTCGCCGCCCAAAGGCGACCTCCGTGCCTCCTCACCCATCCATGCCCACCTCTCCTCCATCCTCTCCTCCGGTGGCACCCGCTCTGCCTCCCTTGGTGTCGCATCCCTCAGCGCCGCCATCCTCACCCATCCTCTCTGATTCTCCGGCCGAGCCTCCTTTTCCTTCTCCAGAAATCACACCCGAGCCTGCTGCTCCTCTCCGTCGCTCAAGCCGCCACCCCGTCCAACCGGTCAAATTCAACGATTATGTTTGCTCACACGTCTGCTCCGACCAATCGTCCTCCCTACATCCAGGTCCACGCAAAGGTACGCGATATCCTTTGGCGAATTATATCTCTTATCATCGCTATAAGCCTGCTTATCAGCATTTTGTTGCTCAAATTAGCGCTTCCACAGAACCCAAGAACTATTCCGAAGCCGTTGCTCATCCTGAGTGGCGAGCGGCTATGGCGACAGAATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

276

Amino Acids

29.8

Weight (kDa)

9.17

Isoelectric Point (pI)

84.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_retrovirus PF25597 3 - 43 6e-15 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 93
AccB1I GGYRCC 2 cut(s) 340, 439
AccBSI CCGCTC 2 cut(s) 446, 806
AccII CGCG 2 cut(s) 87, 676
AciI CCGC 6 cut(s) 335, 370, 444, 479, 577, 806
AclWI GGATC 1 cut(s) 281
AcoI YGGCCR 1 cut(s) 510
AcsI RAATTY 2 cut(s) 95, 599
AcuI CTGAAG 1 cut(s) 267
AcvI CACGTG 1 cut(s) 230
AcyI GRCGYC 2 cut(s) 90, 341
AfaI GTAC 1 cut(s) 673
AfeI AGCGCT 1 cut(s) 751
AfiI CCNNNNNNNGG 2 cut(s) 376, 668
AflIII ACRYGT 2 cut(s) 227, 622
AgeI ACCGGT 1 cut(s) 592
AgsI TTSAA 1 cut(s) 604
AhdI GACNNNNNGTC 1 cut(s) 640
AhlI ACTAGT 1 cut(s) 80
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 2 cut(s) 166, 655
Alw26I GTCTC 2 cut(s) 98, 319
AlwI GGATC 1 cut(s) 281
Ama87I CYCGRG 1 cut(s) 545
Aor51HI AGCGCT 1 cut(s) 751
AoxI GGCC 2 cut(s) 169, 510
ApeKI GCWGC 1 cut(s) 554
ApoI RAATTY 2 cut(s) 95, 599
AsiGI ACCGGT 1 cut(s) 592
AspLEI GCGC 3 cut(s) 343, 478, 752
AspS9I GGNCC 2 cut(s) 170, 659
AsuHPI GGTGA 2 cut(s) 389, 480
AvaI CYCGRG 1 cut(s) 545
AvaII GGWCC 1 cut(s) 659
BanI GGYRCC 2 cut(s) 340, 439
BbrPI CACGTG 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 312
BbvCI CCTCAGC 1 cut(s) 472
BbvI GCAGC 1 cut(s) 541
BccI CCATC 6 cut(s) 13, 116, 409, 430, 490, 500
BceAI ACGGC 1 cut(s) 767
BcgI CGANNNNNNTGC 6 cut(s) 370, 404, 536, 570, 767, 801
BciT130I CCWGG 2 cut(s) 168, 657
BcoDI GTCTC 2 cut(s) 98, 319
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 1 cut(s) 81
BfoI RGCGCY 3 cut(s) 344, 479, 753
BisI GCNGC 5 cut(s) 370, 479, 555, 577, 807
BlsI GCNGC 5 cut(s) 371, 480, 556, 578, 808
Bme1390I CCNGG 2 cut(s) 168, 657
Bme18I GGWCC 1 cut(s) 659
BmeRI GACNNNNNGTC 1 cut(s) 640
BmeT110I CYCGRG 1 cut(s) 545
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 2 cut(s) 170, 659
BmiI GGNNCC 2 cut(s) 342, 441
BmrFI CCNGG 2 cut(s) 168, 657
BmsI GCATC 1 cut(s) 475
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 2 cut(s) 288, 516
Bpu10I CCTNAGC 1 cut(s) 472
BpuEI CTTGAG 1 cut(s) 556
BsaAI YACGTR 1 cut(s) 230
BsaHI GRCGYC 2 cut(s) 90, 341
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 456
BsaWI WCCGGW 2 cut(s) 433, 592
BsaXI ACNNNNNCTCC 6 cut(s) 235, 265, 403, 433, 614, 644
Bsc4I CCNNNNNNNGG 2 cut(s) 376, 668
Bse118I RCCGGY 2 cut(s) 337, 592
BseBI CCWGG 2 cut(s) 168, 657
BseDI CCNNGG 1 cut(s) 456
BseGI GGATG 7 cut(s) 401, 422, 466, 482, 492, 652, 790
BseLI CCNNNNNNNGG 2 cut(s) 376, 668
BseMII CTCAG 2 cut(s) 486, 786
BseRI GAGGAG 5 cut(s) 201, 384, 408, 420, 549
BseX3I CGGCCG 1 cut(s) 510
BseXI GCAGC 1 cut(s) 541
BseYI CCCAGC 1 cut(s) 134
Bsh1236I CGCG 2 cut(s) 87, 676
Bsh1285I CGRYCG 1 cut(s) 513
BshFI GGCC 2 cut(s) 171, 512
BshNI GGYRCC 2 cut(s) 340, 439
BshTI ACCGGT 1 cut(s) 592
BsiEI CGRYCG 1 cut(s) 513
BsiHKCI CYCGRG 1 cut(s) 545
BsiSI CCGG 4 cut(s) 338, 434, 509, 593
BslI CCNNNNNNNGG 2 cut(s) 376, 668
BsmAI GTCTC 2 cut(s) 98, 319
BsmBI CGTCTC 1 cut(s) 319
BsnI GGCC 2 cut(s) 171, 512
Bso31I GGTCTC 1 cut(s) 98
BsoBI CYCGRG 1 cut(s) 545
Bsp143I GATC 1 cut(s) 286
Bsp68I TCGCGA 1 cut(s) 87
BspACI CCGC 6 cut(s) 335, 370, 444, 479, 577, 806
BspANI GGCC 2 cut(s) 171, 512
BspCNI CTCAG 2 cut(s) 485, 787
BspFNI CGCG 2 cut(s) 87, 676
BspHI TCATGA 1 cut(s) 100
BspLI GGNNCC 2 cut(s) 342, 441
BspPI GGATC 1 cut(s) 281
BspT107I GGYRCC 2 cut(s) 340, 439
BspTNI GGTCTC 1 cut(s) 98
BsrBI CCGCTC 2 cut(s) 446, 806
BsrFI RCCGGY 2 cut(s) 337, 592
BssAI RCCGGY 2 cut(s) 337, 592
BssECI CCNNGG 1 cut(s) 456
BssMI GATC 1 cut(s) 286
BssNI GRCGYC 2 cut(s) 90, 341
BssT1I CCWWGG 1 cut(s) 456
Bst2UI CCWGG 2 cut(s) 168, 657
Bst6I CTCTTC 1 cut(s) 180
BstACI GRCGYC 2 cut(s) 90, 341
BstBAI YACGTR 1 cut(s) 230
BstC8I GCNNGC 4 cut(s) 339, 552, 720, 804
BstDEI CTNAG 2 cut(s) 472, 795
BstEII GGTNACC 1 cut(s) 20
BstF5I GGATG 7 cut(s) 401, 422, 466, 482, 492, 652, 790
BstFNI CGCG 2 cut(s) 87, 676
BstH2I RGCGCY 3 cut(s) 344, 479, 753
BstHHI GCGC 3 cut(s) 343, 478, 752
BstKTI GATC 1 cut(s) 289
BstMAI GTCTC 2 cut(s) 98, 319
BstMBI GATC 1 cut(s) 286
BstMCI CGRYCG 1 cut(s) 513
BstMWI GCNNNNNNNGC 2 cut(s) 576, 812
BstNI CCWGG 2 cut(s) 168, 657
BstPI GGTNACC 1 cut(s) 20
BstSCI CCNGG 2 cut(s) 166, 655
BstUI CGCG 2 cut(s) 87, 676
BstV1I GCAGC 1 cut(s) 541
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 1 cut(s) 286
BstYI RGATCY 1 cut(s) 286
BstZI CGGCCG 1 cut(s) 510
BsuRI GGCC 2 cut(s) 171, 512
BtgZI GCGATG 1 cut(s) 692
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 7 cut(s) 401, 422, 466, 482, 492, 652, 790
BtuMI TCGCGA 1 cut(s) 87
Cac8I GCNNGC 4 cut(s) 339, 552, 720, 804
CciI TCATGA 1 cut(s) 100
CfoI GCGC 3 cut(s) 343, 478, 752
Cfr10I RCCGGY 2 cut(s) 337, 592
Cfr13I GGNCC 2 cut(s) 170, 659
Csp6I GTAC 1 cut(s) 672
CspAI ACCGGT 1 cut(s) 592
CviAII CATG 2 cut(s) 101, 406
CviQI GTAC 1 cut(s) 672
DdeI CTNAG 2 cut(s) 472, 795
DinI GGCGCC 1 cut(s) 342
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
DriI GACNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 1 cut(s) 510
EagI CGGCCG 1 cut(s) 510
Eam1104I CTCTTC 1 cut(s) 180
Eam1105I GACNNNNNGTC 1 cut(s) 640
EarI CTCTTC 1 cut(s) 180
EclXI CGGCCG 1 cut(s) 510
Eco130I CCWWGG 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 98
Eco32I GATATC 1 cut(s) 680
Eco47I GGWCC 1 cut(s) 659
Eco47III AGCGCT 1 cut(s) 751
Eco52I CGGCCG 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 267
Eco72I CACGTG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 545
Eco91I GGTNACC 1 cut(s) 20
EcoO109I RGGNCCY 1 cut(s) 170
EcoO65I GGTNACC 1 cut(s) 20
EcoRII CCWGG 2 cut(s) 166, 655
EcoRV GATATC 1 cut(s) 680
EcoT14I CCWWGG 1 cut(s) 456
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 456
Esp3I CGTCTC 1 cut(s) 319
FaeI CATG 2 cut(s) 104, 409
FaiI YATR 9 cut(s) 102, 141, 222, 407, 612, 696, 714, 812, 826
FatI CATG 2 cut(s) 100, 405
FauI CCCGC 1 cut(s) 451
Fnu4HI GCNGC 5 cut(s) 370, 479, 555, 577, 807
FokI GGATG 7 cut(s) 388, 409, 453, 469, 479, 639, 777
Fsp4HI GCNGC 5 cut(s) 370, 479, 555, 577, 807
FspBI CTAG 1 cut(s) 81
GlaI GCGC 3 cut(s) 342, 477, 751
GluI GCNGC 5 cut(s) 370, 479, 555, 577, 807
GsaI CCCAGC 1 cut(s) 138
GsuI CTGGAG 2 cut(s) 288, 516
HaeII RGCGCY 3 cut(s) 344, 479, 753
HaeIII GGCC 2 cut(s) 171, 512
HapII CCGG 4 cut(s) 338, 434, 509, 593
HhaI GCGC 3 cut(s) 343, 478, 752
Hin1I GRCGYC 2 cut(s) 90, 341
Hin1II CATG 2 cut(s) 104, 409
Hin6I GCGC 3 cut(s) 341, 476, 750
HinP1I GCGC 3 cut(s) 341, 476, 750
HinfI GANTC 2 cut(s) 328, 503
HpaII CCGG 4 cut(s) 338, 434, 509, 593
HphI GGTGA 2 cut(s) 389, 480
Hpy166II GTNNAC 1 cut(s) 662
Hpy188I TCNGA 6 cut(s) 32, 286, 327, 502, 634, 778
Hpy188III TCNNGA 5 cut(s) 86, 101, 305, 533, 794
Hpy8I GTNNAC 1 cut(s) 662
Hpy99I CGWCG 2 cut(s) 92, 570
HpyAV CCTTC 6 cut(s) 159, 199, 225, 306, 362, 537
HpyCH4IV ACGT 3 cut(s) 90, 229, 624
HpyF10VI GCNNNNNNNGC 2 cut(s) 576, 812
HpyF3I CTNAG 2 cut(s) 472, 795
HpySE526I ACGT 3 cut(s) 90, 229, 624
Hsp92I GRCGYC 2 cut(s) 90, 341
Hsp92II CATG 2 cut(s) 104, 409
HspAI GCGC 3 cut(s) 341, 476, 750
KasI GGCGCC 1 cut(s) 340
KroI GCCGGC 1 cut(s) 337
KroNI GCCGGC 1 cut(s) 339
Kzo9I GATC 1 cut(s) 286
LmnI GCTCC 2 cut(s) 562, 635
Lsp1109I GCAGC 1 cut(s) 541
LweI GCATC 1 cut(s) 475
MaeI CTAG 1 cut(s) 81
MaeII ACGT 3 cut(s) 90, 229, 624
MaeIII GTNAC 2 cut(s) 20, 41
MalI GATC 1 cut(s) 288
MbiI CCGCTC 2 cut(s) 446, 806
MboI GATC 1 cut(s) 286
MboII GAAGA 5 cut(s) 167, 177, 228, 231, 312
MflI RGATCY 1 cut(s) 286
MluCI AATT 6 cut(s) 95, 180, 599, 691, 744, 821
Mly113I GGCGCC 1 cut(s) 341
MlyI GAGTC 1 cut(s) 322
MmeI TCCRAC 4 cut(s) 278, 350, 613, 657
MreI CGCCGGCG 1 cut(s) 337
MroNI GCCGGC 1 cut(s) 337
MspI CCGG 4 cut(s) 338, 434, 509, 593
MspR9I CCNGG 2 cut(s) 168, 657
MvaI CCWGG 2 cut(s) 168, 657
MvnI CGCG 2 cut(s) 87, 676
MwoI GCNNNNNNNGC 2 cut(s) 576, 812
NaeI GCCGGC 1 cut(s) 339
NarI GGCGCC 1 cut(s) 341
NdeII GATC 1 cut(s) 286
NgoMIV GCCGGC 1 cut(s) 337
NlaIII CATG 2 cut(s) 104, 409
NlaIV GGNNCC 2 cut(s) 342, 441
NmeAIII GCCGAG 1 cut(s) 538
NruI TCGCGA 1 cut(s) 87
PagI TCATGA 1 cut(s) 100
PcsI WCGNNNNNNNCGW 2 cut(s) 323, 630
PdiI GCCGGC 1 cut(s) 339
PfeI GAWTC 1 cut(s) 503
PflFI GACNNNGTC 1 cut(s) 311
PinAI ACCGGT 1 cut(s) 592
PkrI GCNGC 5 cut(s) 371, 480, 556, 578, 808
PleI GAGTC 1 cut(s) 322
PluTI GGCGCC 1 cut(s) 344
PmaCI CACGTG 1 cut(s) 230
PmlI CACGTG 1 cut(s) 230
PpsI GAGTC 1 cut(s) 322
Ppu21I YACGTR 1 cut(s) 230
Psp6I CCWGG 2 cut(s) 166, 655
PspCI CACGTG 1 cut(s) 230
PspEI GGTNACC 1 cut(s) 20
PspFI CCCAGC 1 cut(s) 134
PspGI CCWGG 2 cut(s) 166, 655
PspN4I GGNNCC 2 cut(s) 342, 441
PspPI GGNCC 2 cut(s) 170, 659
PsuI RGATCY 1 cut(s) 286
PsyI GACNNNGTC 1 cut(s) 311
RruI TCGCGA 1 cut(s) 87
RsaI GTAC 1 cut(s) 673
RsaNI GTAC 1 cut(s) 672
SatI GCNGC 5 cut(s) 370, 479, 555, 577, 807
Sau3AI GATC 1 cut(s) 286
Sau96I GGNCC 2 cut(s) 170, 659
SchI GAGTC 1 cut(s) 322
ScrFI CCNGG 2 cut(s) 168, 657
SfaNI GCATC 1 cut(s) 475
SfoI GGCGCC 1 cut(s) 342
SgrAI CRCCGGYG 1 cut(s) 337
SinI GGWCC 1 cut(s) 659
SmlI CTYRAG 1 cut(s) 571
SmoI CTYRAG 1 cut(s) 571
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 6 cut(s) 95, 180, 599, 691, 744, 821
SsiI CCGC 6 cut(s) 335, 370, 444, 479, 577, 806
SspDI GGCGCC 1 cut(s) 340
SspI AATATT 1 cut(s) 362
SspMI CTAG 1 cut(s) 81
StyD4I CCNGG 2 cut(s) 166, 655
StyI CCWWGG 1 cut(s) 456
TaiI ACGT 3 cut(s) 93, 232, 627
TaqI TCGA 1 cut(s) 62
TasI AATT 6 cut(s) 95, 180, 599, 691, 744, 821
TauI GCSGC 4 cut(s) 372, 481, 579, 809
TfiI GAWTC 1 cut(s) 503
TseI GCWGC 1 cut(s) 554
TspDTI ATGAA 4 cut(s) 4, 89, 181, 288
TspGWI ACGGA 2 cut(s) 376, 554
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 1 cut(s) 659
XapI RAATTY 2 cut(s) 95, 599
XspI CTAG 1 cut(s) 81
ZraI GACGTC 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.