Rw7G028340

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000106
Physical Location & Seq
Forward (+)
38563969 .. 38565440
1472 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G028340.1

Sequence Viewer

Length: 1179 bp
ATGGCTGGAGACGATATATTTTCTGAAACTCCCAATGGTGGCAGCGGCACCAGCGGCACCTCCTCTGATGAATCTGCAAATCCGCTATTCCTCCATCATTCAGACCATCCCGGTCTCATCCTTGTCTCCAAGAAATTGACAGGAGACAATTACAACTCATGGTGTCGTGCCATGAGGATCTCCTTGAGTGCGAAGAATAAGACCGGATTCATTACCGGTGCAATCAAAGAACCATCTGCAATCAAGAAACCAGAGGAGCATGCTCTATGGCAGCGATGCAACGACATGGTCTTGTCCTGGATTCTCAACTCTCTTGAACCAGACCTTGCTGATTCGGTCCTCTCCTGCACAACACCTCATGCAATTTGGGAGGACCTTAGGGAACGCTTTGCCTTGGGAAACGCCCCACGTATCTTCCAGGTTCAAAGAGACATCTACAAGATTGAACAAGGCCAATTGTCAATCGCTGCTTATTATACCAAGTTGAAAGCACTTTGGGATGAACTTGCCTCATACAATACAGTGGAGAATTGCACTTGTGGGGCACAGAATGACCGCACCAAACTCATGCAATTCCTCATGGGCTTGAATGAATTGTATGCAGGTACTCGTGGTCAAATTTTGCTAATGAATCCATTACCTTCTGTGAGACAGGCCTATGCTTCAGTAACTCAGGAAGAGAAGCAGCGAGAACTTGGTGTTGTTGCCCTTGCTCCATCCAATGCAGCAGCAATGGCCGTTCGTAACTATCCCAGGCCAGGATTGATACCTCGTCGCAATCCTGGCAACCCAGGATTGATACCTCGTCGCAATCCTGGCAATCAAGGCAGCAGTTCTCGCAATCACACTCCAGTTCAATGCACCTATTGTGACAAATTTTATCATACTGAGGAGACTTGTCACAGGAAACATGGCTTTCCACCTGGTCATCGGCTCTATAAACGCAATCCACAACAAGGAAATCGACCTCCACCACACAATGATGCCTCTGCTAATCATGTTGATTGCACACCTTCATTTAAGGAGCTGCAAGCCACACTTCCCAACCTGACTGAAGATCAATACACTCAGGTTATCGCTGCATTGAATCCGAAGCCACCAACTCCTCAGGCTAATGCCGCTTCTGCTACAGAGTTTGCTTCAAGATTTGGCTACGAGGATGATGATTGCTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

392

Amino Acids

43.37

Weight (kDa)

7.16

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 32 - 79 1.4e-19 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 58 - 231 4.5e-06 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 593
AccB1I GGYRCC 2 cut(s) 47, 56
AciI CCGC 5 cut(s) 45, 54, 83, 556, 1119
AclWI GGATC 1 cut(s) 185
AcoI YGGCCR 1 cut(s) 735
AcsI RAATTY 2 cut(s) 618, 875
AcuI CTGAAG 2 cut(s) 648, 1074
AfaI GTAC 1 cut(s) 607
AfiI CCNNNNNNNGG 3 cut(s) 38, 758, 956
AgeI ACCGGT 1 cut(s) 215
AgsI TTSAA 8 cut(s) 317, 425, 446, 487, 589, 857, 1087, 1143
AjnI CCWGG 8 cut(s) 296, 417, 752, 757, 781, 790, 814, 922
AluBI AGCT 1 cut(s) 1027
AluI AGCT 1 cut(s) 1027
Alw26I GTCTC 7 cut(s) 3, 119, 130, 138, 423, 643, 887
AlwI GGATC 1 cut(s) 185
AoxI GGCC 4 cut(s) 451, 654, 735, 755
ApeKI GCWGC 9 cut(s) 42, 271, 467, 685, 725, 728, 828, 1027, 1079
ApoI RAATTY 2 cut(s) 618, 875
AsiGI ACCGGT 1 cut(s) 215
AspS9I GGNCC 2 cut(s) 337, 373
AsuC2I CCSGG 1 cut(s) 111
AvaII GGWCC 2 cut(s) 337, 373
AxyI CCTNAGG 2 cut(s) 377, 1107
BaeGI GKGCMC 1 cut(s) 547
BanI GGYRCC 2 cut(s) 47, 56
BauI CACGAG 1 cut(s) 609
BbvI GCAGC 9 cut(s) 54, 283, 454, 697, 737, 740, 840, 1014, 1066
BccI CCATC 4 cut(s) 102, 114, 241, 724
BceAI ACGGC 1 cut(s) 722
BciT130I CCWGG 8 cut(s) 298, 419, 754, 759, 783, 792, 816, 924
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 7 cut(s) 3, 119, 130, 138, 423, 643, 887
BfmI CTRYAG 1 cut(s) 1128
BfuAI ACCTGC 1 cut(s) 593
Bme1390I CCNGG 9 cut(s) 111, 298, 419, 754, 759, 783, 792, 816, 924
Bme18I GGWCC 2 cut(s) 337, 373
BmgT120I GGNCC 2 cut(s) 337, 373
BmiI GGNNCC 2 cut(s) 49, 58
BmrFI CCNGG 9 cut(s) 111, 298, 419, 754, 759, 783, 792, 816, 924
BmsI GCATC 2 cut(s) 266, 973
BpmI CTGGAG 2 cut(s) 27, 834
BpuEI CTTGAG 1 cut(s) 205
BpuMI CCSGG 1 cut(s) 111
BsaAI YACGTR 1 cut(s) 410
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 3 cut(s) 393, 752, 790
BsaWI WCCGGW 2 cut(s) 203, 215
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 758, 956
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 1 cut(s) 851
Bse21I CCTNAGG 2 cut(s) 377, 1107
Bse3DI GCAATG 1 cut(s) 738
BseBI CCWGG 8 cut(s) 298, 419, 754, 759, 783, 792, 816, 924
BseDI CCNNGG 3 cut(s) 393, 752, 790
BseGI GGATG 5 cut(s) 106, 117, 505, 716, 1165
BseLI CCNNNNNNNGG 3 cut(s) 38, 758, 956
BseMI GCAATG 1 cut(s) 738
BseMII CTCAG 4 cut(s) 686, 879, 1082, 1121
BseNI ACTGG 1 cut(s) 851
BseRI GAGGAG 4 cut(s) 52, 269, 905, 1095
BseSI GKGCMC 1 cut(s) 547
BseXI GCAGC 9 cut(s) 54, 283, 454, 697, 737, 740, 840, 1014, 1066
BsgI GTGCAG 1 cut(s) 331
BshFI GGCC 4 cut(s) 453, 656, 737, 757
BshNI GGYRCC 2 cut(s) 47, 56
BshTI ACCGGT 1 cut(s) 215
BsiSI CCGG 3 cut(s) 111, 204, 216
BslI CCNNNNNNNGG 3 cut(s) 38, 758, 956
BsmAI GTCTC 7 cut(s) 3, 119, 130, 138, 423, 643, 887
BsmBI CGTCTC 1 cut(s) 3
BsnI GGCC 4 cut(s) 453, 656, 737, 757
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 547
Bsp143I GATC 2 cut(s) 177, 1057
BspACI CCGC 5 cut(s) 45, 54, 83, 556, 1119
BspANI GGCC 4 cut(s) 453, 656, 737, 757
BspCNI CTCAG 4 cut(s) 685, 880, 1081, 1120
BspLI GGNNCC 2 cut(s) 49, 58
BspMI ACCTGC 1 cut(s) 593
BspPI GGATC 1 cut(s) 185
BspT107I GGYRCC 2 cut(s) 47, 56
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 738
BsrFI RCCGGY 1 cut(s) 215
BsrI ACTGG 1 cut(s) 851
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 3 cut(s) 393, 752, 790
BssMI GATC 2 cut(s) 177, 1057
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 1 cut(s) 393
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 8 cut(s) 298, 419, 754, 759, 783, 792, 816, 924
Bst4CI ACNGT 1 cut(s) 523
Bst6I CTCTTC 1 cut(s) 672
BstBAI YACGTR 1 cut(s) 410
BstC8I GCNNGC 2 cut(s) 261, 1032
BstDEI CTNAG 5 cut(s) 377, 672, 888, 1068, 1107
BstF5I GGATG 5 cut(s) 106, 117, 505, 716, 1165
BstKTI GATC 2 cut(s) 180, 1060
BstMAI GTCTC 7 cut(s) 3, 119, 130, 138, 423, 643, 887
BstMBI GATC 2 cut(s) 177, 1057
BstMWI GCNNNNNNNGC 9 cut(s) 51, 54, 734, 783, 816, 825, 837, 1118, 1124
BstNI CCWGG 8 cut(s) 298, 419, 754, 759, 783, 792, 816, 924
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 9 cut(s) 109, 296, 417, 752, 757, 781, 790, 814, 922
BstSFI CTRYAG 1 cut(s) 1128
BstSLI GKGCMC 1 cut(s) 547
BstV1I GCAGC 9 cut(s) 54, 283, 454, 697, 737, 740, 840, 1014, 1066
BstX2I RGATCY 1 cut(s) 177
BstYI RGATCY 1 cut(s) 177
Bsu36I CCTNAGG 2 cut(s) 377, 1107
BsuRI GGCC 4 cut(s) 453, 656, 737, 757
BtgZI GCGATG 1 cut(s) 289
BtsCI GGATG 5 cut(s) 106, 117, 505, 716, 1165
BtsIMutI CAGTG 1 cut(s) 528
BveI ACCTGC 1 cut(s) 593
Cac8I GCNNGC 2 cut(s) 261, 1032
Cfr10I RCCGGY 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 337, 373
CsiI ACCWGGT 1 cut(s) 922
Csp6I GTAC 1 cut(s) 606
CspAI ACCGGT 1 cut(s) 215
CviAII CATG 9 cut(s) 159, 172, 260, 286, 359, 568, 580, 911, 998
CviQI GTAC 1 cut(s) 606
DdeI CTNAG 5 cut(s) 377, 672, 888, 1068, 1107
DpnI GATC 2 cut(s) 179, 1059
DpnII GATC 2 cut(s) 177, 1057
EaeI YGGCCR 1 cut(s) 735
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
Eco130I CCWWGG 1 cut(s) 393
Eco147I AGGCCT 1 cut(s) 656
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 2 cut(s) 337, 373
Eco57I CTGAAG 2 cut(s) 648, 1074
Eco81I CCTNAGG 2 cut(s) 377, 1107
EcoO109I RGGNCCY 1 cut(s) 373
EcoRII CCWGG 8 cut(s) 296, 417, 752, 757, 781, 790, 814, 922
EcoT14I CCWWGG 1 cut(s) 393
ErhI CCWWGG 1 cut(s) 393
Esp3I CGTCTC 1 cut(s) 3
FaeI CATG 9 cut(s) 162, 175, 263, 289, 362, 571, 583, 914, 1001
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FatI CATG 9 cut(s) 158, 171, 259, 285, 358, 567, 579, 910, 997
FokI GGATG 5 cut(s) 93, 104, 512, 703, 1172
GsuI CTGGAG 2 cut(s) 27, 834
HaeIII GGCC 4 cut(s) 453, 656, 737, 757
HapII CCGG 3 cut(s) 111, 204, 216
Hin1II CATG 9 cut(s) 162, 175, 263, 289, 362, 571, 583, 914, 1001
HinfI GANTC 6 cut(s) 71, 207, 301, 332, 631, 1087
HpaII CCGG 3 cut(s) 111, 204, 216
Hpy188I TCNGA 4 cut(s) 25, 67, 103, 1092
Hpy188III TCNNGA 4 cut(s) 244, 314, 674, 1143
Hpy99I CGWCG 2 cut(s) 777, 810
HpyAV CCTTC 2 cut(s) 651, 1023
HpyCH4III ACNGT 1 cut(s) 523
HpyCH4IV ACGT 1 cut(s) 409
HpyF10VI GCNNNNNNNGC 9 cut(s) 51, 54, 734, 783, 816, 825, 837, 1118, 1124
HpyF3I CTNAG 5 cut(s) 377, 672, 888, 1068, 1107
HpySE526I ACGT 1 cut(s) 409
Hsp92II CATG 9 cut(s) 162, 175, 263, 289, 362, 571, 583, 914, 1001
Kzo9I GATC 2 cut(s) 177, 1057
LmnI GCTCC 3 cut(s) 256, 718, 1024
Lsp1109I GCAGC 9 cut(s) 54, 283, 454, 697, 737, 740, 840, 1014, 1066
LweI GCATC 2 cut(s) 266, 973
MabI ACCWGGT 1 cut(s) 922
MaeII ACGT 1 cut(s) 409
MaeIII GTNAC 4 cut(s) 667, 743, 869, 899
MalI GATC 2 cut(s) 179, 1059
MboI GATC 2 cut(s) 177, 1057
MboII GAAGA 4 cut(s) 205, 406, 689, 1067
MfeI CAATTG 1 cut(s) 455
MflI RGATCY 1 cut(s) 177
MhlI GDGCHC 1 cut(s) 547
MluCI AATT 9 cut(s) 134, 148, 363, 455, 529, 572, 593, 618, 875
MseI TTAA 1 cut(s) 1020
MslI CAYNNNNRTG 1 cut(s) 981
MspA1I CMGCKG 2 cut(s) 45, 54
MspI CCGG 3 cut(s) 111, 204, 216
MspR9I CCNGG 9 cut(s) 111, 298, 419, 754, 759, 783, 792, 816, 924
MunI CAATTG 1 cut(s) 455
MvaI CCWGG 8 cut(s) 298, 419, 754, 759, 783, 792, 816, 924
MwoI GCNNNNNNNGC 9 cut(s) 51, 54, 734, 783, 816, 825, 837, 1118, 1124
NciI CCSGG 1 cut(s) 111
NdeII GATC 2 cut(s) 177, 1057
NlaIII CATG 9 cut(s) 162, 175, 263, 289, 362, 571, 583, 914, 1001
NlaIV GGNNCC 2 cut(s) 49, 58
NmuCI GTSAC 2 cut(s) 869, 899
NspI RCATGY 1 cut(s) 263
PaeI GCATGC 1 cut(s) 263
PceI AGGCCT 1 cut(s) 656
PfeI GAWTC 6 cut(s) 71, 207, 301, 332, 631, 1087
PflFI GACNNNGTC 1 cut(s) 287
PfoI TCCNGGA 1 cut(s) 296
PinAI ACCGGT 1 cut(s) 215
Ppu21I YACGTR 1 cut(s) 410
PpuMI RGGWCCY 1 cut(s) 373
Psp5II RGGWCCY 1 cut(s) 373
Psp6I CCWGG 8 cut(s) 296, 417, 752, 757, 781, 790, 814, 922
PspGI CCWGG 8 cut(s) 296, 417, 752, 757, 781, 790, 814, 922
PspN4I GGNNCC 2 cut(s) 49, 58
PspPI GGNCC 2 cut(s) 337, 373
PspPPI RGGWCCY 1 cut(s) 373
PsuI RGATCY 1 cut(s) 177
PsyI GACNNNGTC 1 cut(s) 287
RsaI GTAC 1 cut(s) 607
RsaNI GTAC 1 cut(s) 606
RseI CAYNNNNRTG 1 cut(s) 981
SaqAI TTAA 1 cut(s) 1020
Sau3AI GATC 2 cut(s) 177, 1057
Sau96I GGNCC 2 cut(s) 337, 373
ScrFI CCNGG 9 cut(s) 111, 298, 419, 754, 759, 783, 792, 816, 924
SduI GDGCHC 1 cut(s) 547
SexAI ACCWGGT 1 cut(s) 922
SfaNI GCATC 2 cut(s) 266, 973
SfcI CTRYAG 1 cut(s) 1128
SinI GGWCC 2 cut(s) 337, 373
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 1 cut(s) 184
SmoI CTYRAG 1 cut(s) 184
SphI GCATGC 1 cut(s) 263
Sse9I AATT 9 cut(s) 134, 148, 363, 455, 529, 572, 593, 618, 875
SseBI AGGCCT 1 cut(s) 656
SsiI CCGC 5 cut(s) 45, 54, 83, 556, 1119
StuI AGGCCT 1 cut(s) 656
StyD4I CCNGG 9 cut(s) 109, 296, 417, 752, 757, 781, 790, 814, 922
StyI CCWWGG 1 cut(s) 393
TaaI ACNGT 1 cut(s) 523
TaiI ACGT 1 cut(s) 412
TaqI TCGA 1 cut(s) 964
TaqII GACCGA 1 cut(s) 325
TasI AATT 9 cut(s) 134, 148, 363, 455, 529, 572, 593, 618, 875
TauI GCSGC 3 cut(s) 48, 57, 1121
TfiI GAWTC 6 cut(s) 71, 207, 301, 332, 631, 1087
Tru1I TTAA 1 cut(s) 1020
Tru9I TTAA 1 cut(s) 1020
TscAI CASTG 1 cut(s) 528
TseFI GTSAC 2 cut(s) 869, 899
TseI GCWGC 9 cut(s) 42, 271, 467, 685, 725, 728, 828, 1027, 1079
Tsp45I GTSAC 2 cut(s) 869, 899
TspDTI ATGAA 6 cut(s) 84, 199, 516, 606, 644, 1005
TspRI CASTG 1 cut(s) 528
Tth111I GACNNNGTC 1 cut(s) 287
VpaK11BI GGWCC 2 cut(s) 337, 373
XapI RAATTY 2 cut(s) 618, 875
XceI RCATGY 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.