gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 291 |
| AgsI | TTSAA | 5 cut(s) | 66, 194, 205, 215, 239 |
| Alw21I | GWGCWC | 2 cut(s) | 90, 349 |
| Alw44I | GTGCAC | 1 cut(s) | 86 |
| ApaLI | GTGCAC | 1 cut(s) | 86 |
| ApoI | RAATTY | 1 cut(s) | 134 |
| AsuC2I | CCSGG | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 2 cut(s) | 25, 88 |
| BaeGI | GKGCMC | 1 cut(s) | 90 |
| BbsI | GAAGAC | 1 cut(s) | 230 |
| Bbv12I | GWGCWC | 2 cut(s) | 90, 349 |
| BcnI | CCSGG | 1 cut(s) | 40 |
| BfmI | CTRYAG | 1 cut(s) | 33 |
| Bme1390I | CCNGG | 1 cut(s) | 40 |
| BmrFI | CCNGG | 1 cut(s) | 40 |
| BpiI | GAAGAC | 1 cut(s) | 230 |
| BpuMI | CCSGG | 1 cut(s) | 40 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 403 |
| BseSI | GKGCMC | 1 cut(s) | 90 |
| BsiHKAI | GWGCWC | 2 cut(s) | 90, 349 |
| BsiSI | CCGG | 1 cut(s) | 39 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 349 |
| Bsp1407I | TGTACA | 1 cut(s) | 289 |
| BsrGI | TGTACA | 1 cut(s) | 289 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssT1I | CCWWGG | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 1 cut(s) | 158 |
| BstAUI | TGTACA | 1 cut(s) | 289 |
| BstDEI | CTNAG | 1 cut(s) | 228 |
| BstEII | GGTNACC | 1 cut(s) | 76 |
| BstF5I | GGATG | 1 cut(s) | 403 |
| BstPI | GGTNACC | 1 cut(s) | 76 |
| BstSCI | CCNGG | 1 cut(s) | 38 |
| BstSFI | CTRYAG | 1 cut(s) | 33 |
| BstSLI | GKGCMC | 1 cut(s) | 90 |
| BstV2I | GAAGAC | 1 cut(s) | 230 |
| BtsCI | GGATG | 1 cut(s) | 403 |
| Csp6I | GTAC | 1 cut(s) | 290 |
| CviAII | CATG | 3 cut(s) | 172, 365, 379 |
| CviJI | RGCY | 3 cut(s) | 7, 38, 272 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 38, 272 |
| CviQI | GTAC | 1 cut(s) | 290 |
| DdeI | CTNAG | 1 cut(s) | 228 |
| Eam1104I | CTCTTC | 1 cut(s) | 158 |
| EarI | CTCTTC | 1 cut(s) | 158 |
| Eco130I | CCWWGG | 1 cut(s) | 81 |
| Eco32I | GATATC | 1 cut(s) | 325 |
| Eco91I | GGTNACC | 1 cut(s) | 76 |
| EcoO65I | GGTNACC | 1 cut(s) | 76 |
| EcoRV | GATATC | 1 cut(s) | 325 |
| EcoT14I | CCWWGG | 1 cut(s) | 81 |
| ErhI | CCWWGG | 1 cut(s) | 81 |
| FaeI | CATG | 3 cut(s) | 175, 368, 382 |
| FaiI | YATR | 7 cut(s) | 117, 151, 153, 173, 234, 366, 380 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 334, 366 |
| FatI | CATG | 3 cut(s) | 171, 364, 378 |
| FauNDI | CATATG | 1 cut(s) | 151 |
| FokI | GGATG | 1 cut(s) | 410 |
| HapII | CCGG | 1 cut(s) | 39 |
| Hin1II | CATG | 3 cut(s) | 175, 368, 382 |
| HpaII | CCGG | 1 cut(s) | 39 |
| HphI | GGTGA | 2 cut(s) | 25, 88 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 1 cut(s) | 130 |
| Hpy188III | TCNNGA | 1 cut(s) | 181 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 320 |
| HpyF3I | CTNAG | 1 cut(s) | 228 |
| Hsp92II | CATG | 3 cut(s) | 175, 368, 382 |
| LmnI | GCTCC | 1 cut(s) | 352 |
| LpnPI | CCDG | 4 cut(s) | 52, 222, 233, 244 |
| MaeIII | GTNAC | 4 cut(s) | 13, 76, 167, 368 |
| MboII | GAAGA | 3 cut(s) | 175, 235, 294 |
| MhlI | GDGCHC | 2 cut(s) | 90, 349 |
| MluCI | AATT | 5 cut(s) | 69, 92, 134, 293, 314 |
| MnlI | CCTC | 1 cut(s) | 400 |
| MseI | TTAA | 1 cut(s) | 341 |
| MslI | CAYNNNNRTG | 1 cut(s) | 363 |
| MspI | CCGG | 1 cut(s) | 39 |
| MspR9I | CCNGG | 1 cut(s) | 40 |
| NciI | CCSGG | 1 cut(s) | 40 |
| NdeI | CATATG | 1 cut(s) | 151 |
| NlaIII | CATG | 3 cut(s) | 175, 368, 382 |
| NmuCI | GTSAC | 2 cut(s) | 13, 76 |
| PspEI | GGTNACC | 1 cut(s) | 76 |
| RsaI | GTAC | 1 cut(s) | 291 |
| RsaNI | GTAC | 1 cut(s) | 290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 363 |
| SaqAI | TTAA | 1 cut(s) | 341 |
| ScrFI | CCNGG | 1 cut(s) | 40 |
| SduI | GDGCHC | 2 cut(s) | 90, 349 |
| SetI | ASST | 1 cut(s) | 87 |
| SfcI | CTRYAG | 1 cut(s) | 33 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 363 |
| Sse9I | AATT | 5 cut(s) | 69, 92, 134, 293, 314 |
| SspI | AATATT | 1 cut(s) | 197 |
| StyD4I | CCNGG | 1 cut(s) | 38 |
| StyI | CCWWGG | 1 cut(s) | 81 |
| TasI | AATT | 5 cut(s) | 69, 92, 134, 293, 314 |
| TatI | WGTACW | 1 cut(s) | 289 |
| Tru1I | TTAA | 1 cut(s) | 341 |
| Tru9I | TTAA | 1 cut(s) | 341 |
| TseFI | GTSAC | 2 cut(s) | 13, 76 |
| Tsp45I | GTSAC | 2 cut(s) | 13, 76 |
| TspDTI | ATGAA | 2 cut(s) | 147, 189 |
| VneI | GTGCAC | 1 cut(s) | 86 |
| XapI | RAATTY | 1 cut(s) | 134 |