FvH4_4g14242
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000106
Physical Location & Seq
Reverse (-)
17827333 .. 17829857
2525 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14242.t1

Sequence Viewer

Length: 1362 bp
ATGGGCCACTGGGTCCAAACCTGTTATAAACTGATTGGGTATCCACCAGGCCATCCCAAGGGAAAACAGAATTCTGGCCCAAATTCAAGCAATTTTAGAGGTGCTCCTTCGGCTAATCAAGTATCTGAAGTAACAGGCCAAGATGAGAAGAGCCCTTTGGTTCATCAATTCAAGCAATTTTTGTCCATCCTCAACAATAAAAATGAAGCTTCTGGTTCCAAAGCTAATGCGGATCTGGCTATGAGGAGGCCGATTGGTTTGGGTAAACAACGTGATGGACTTTATTATCTGGCGGCGTTAGCGACGAAGAAGCCTGAGACCAGACCTTCCTCAACCCAACCAGCCTACAACTTCACCACCTCATCCTCCGACCTCTGGCATAGTCGCTTAGGCCATGCCCACCAATGCGGCCCAATTCCCTTGATCCATTCCTCATCTTTTGATTCCATATTTGACACATATCCCTATTCGTCTCCTCCTCCTCCACAAACTCCCAACCCCAATCTGCTTCCTTCTTCTCCTCCTACTTCTACGCCACCACCACCTCCTTCTCTCCCTTCCACGCCTCACCCTCCTCCTCTCCGCACCTATTCCTGTAGTCCTCCAACCCAAGCACCACCACCAGAAATCACTACTTCTCCATCTGCCCCGGATTCATCCTCCCCGTTCGGTACTCCGGCCGGATCCGCCTCTCCGGCGCCGGCGTCTTCCTCGGACCTGATACCGCCATCCCCACCCTCAGTTGAACCCGCACCCTTTGCTTCCGACCCGGTACCCGGACCCTCAGTTGAACCCGCACCCTTCTTTTCTGACCCGGAACCCAGACCTCAACCTCCTATTCTTCGTCGTTCCAGTCGCCATACCGCTCCGCCGGCCAAATTGAATGATTACGTTTGTTCTGCCGTTTCTTTTGACCAATCGTCCTCTGTCACGCTAGGTCCGACCAAAGGTACGCGTTATCCATTGGCCAATTATGTCTCCTATCACAGATACAAGCCTGAGTATCGTTCTTTCATTGCTCAAGTTAGTGCTGTCACAGAACCCACCTCTTATTCCGACGCTGCTGCTATTCCGGAATGGCAAGATGAAATGCAATCGGAGTTGGCTGCGCTCCAAGCCAATGGTACTTGGACTCTTACCTCTCTCCCTGCTGGCAAGATACCCATTGGTTGTCGATGGGTCTATAAAGTCAAGCATAAGTCTGATGGCTTTATTGAACGGTATAAGGCGCGATTGGTGGCCAAGGGCTTCACCCAATTGGAAGGTGTCGACTATCAAGACACCTTCTCCCCAACTGCCAAAATCATTTCAGTCAGTTGCCTGCTTGCTTTAGCTGCTGCTCATGGTTGGTCACTTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

454

Amino Acids

48.62

Weight (kDa)

8.73

Isoelectric Point (pI)

64.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 374 - 453 1.8e-20 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 27
Acc65I GGTACC 1 cut(s) 772
AccB1I GGYRCC 2 cut(s) 697, 772
AccBSI CCGCTC 1 cut(s) 866
AccI GTMKAC 1 cut(s) 1269
AccII CGCG 2 cut(s) 955, 1231
AccIII TCCGGA 1 cut(s) 1072
AclWI GGATC 4 cut(s) 240, 418, 678, 691
AcoI YGGCCR 4 cut(s) 678, 873, 966, 1239
AcsI RAATTY 2 cut(s) 70, 82
AcuI CTGAAG 1 cut(s) 147
AcyI GRCGYC 2 cut(s) 698, 704
AfaI GTAC 4 cut(s) 673, 774, 952, 1126
AfiI CCNNNNNNNGG 4 cut(s) 58, 375, 776, 947
AflIII ACRYGT 1 cut(s) 953
AgsI TTSAA 6 cut(s) 87, 172, 746, 791, 883, 1217
AhdI GACNNNNNGTC 1 cut(s) 919
AjnI CCWGG 1 cut(s) 46
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 3 cut(s) 209, 224, 1334
AluI AGCT 3 cut(s) 209, 224, 1334
Alw21I GWGCWC 1 cut(s) 106
Alw26I GTCTC 3 cut(s) 311, 477, 982
AlwI GGATC 4 cut(s) 240, 418, 678, 691
Aor13HI TCCGGA 1 cut(s) 1072
ApeKI GCWGC 5 cut(s) 1061, 1064, 1106, 1334, 1337
ApoI RAATTY 2 cut(s) 70, 82
Asp718I GGTACC 1 cut(s) 772
AspLEI GCGC 3 cut(s) 700, 1111, 1231
AspS9I GGNCC 7 cut(s) 4, 13, 77, 410, 715, 779, 938
AsuC2I CCSGG 4 cut(s) 650, 770, 777, 815
AsuHPI GGTGA 3 cut(s) 346, 560, 1243
AvaII GGWCC 4 cut(s) 13, 715, 779, 938
BalI TGGCCA 2 cut(s) 968, 1241
BamHI GGATCC 1 cut(s) 683
BanI GGYRCC 2 cut(s) 697, 772
BanII GRGCYC 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 699
Bbv12I GWGCWC 1 cut(s) 106
BbvI GCAGC 5 cut(s) 1048, 1051, 1093, 1321, 1324
BccI CCATC 7 cut(s) 60, 194, 269, 649, 736, 1170, 1199
BceAI ACGGC 1 cut(s) 887
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BciT130I CCWGG 1 cut(s) 48
BciVI GTATCC 1 cut(s) 51
BcnI CCSGG 4 cut(s) 650, 770, 777, 815
BcoDI GTCTC 3 cut(s) 311, 477, 982
BfaI CTAG 2 cut(s) 935, 1360
BfmI CTRYAG 1 cut(s) 595
BfoI RGCGCY 1 cut(s) 701
BfuI GTATCC 1 cut(s) 51
BglI GCCNNNNNGGC 1 cut(s) 695
BisI GCNGC 7 cut(s) 294, 409, 1062, 1065, 1107, 1335, 1338
BlsI GCNGC 7 cut(s) 295, 410, 1063, 1066, 1108, 1336, 1339
Bme1390I CCNGG 5 cut(s) 48, 650, 770, 777, 815
Bme18I GGWCC 4 cut(s) 13, 715, 779, 938
BmeRI GACNNNNNGTC 1 cut(s) 919
BmgT120I GGNCC 7 cut(s) 4, 13, 77, 410, 715, 779, 938
BmiI GGNNCC 7 cut(s) 14, 217, 685, 699, 774, 781, 819
BmrFI CCNGG 5 cut(s) 48, 650, 770, 777, 815
BmrI ACTGGG 1 cut(s) 19
BmuI ACTGGG 1 cut(s) 19
BpiI GAAGAC 1 cut(s) 699
Bpu10I CCTNAGC 1 cut(s) 388
BpuEI CTTGAG 1 cut(s) 1005
BpuMI CCSGG 4 cut(s) 650, 770, 777, 815
BsaHI GRCGYC 2 cut(s) 698, 704
BsaI GGTCTC 1 cut(s) 311
BsaJI CCNNGG 4 cut(s) 57, 648, 711, 1242
BsaWI WCCGGW 1 cut(s) 1072
BsaXI ACNNNNNCTCC 4 cut(s) 622, 652, 1271, 1301
Bsc4I CCNNNNNNNGG 4 cut(s) 58, 375, 776, 947
Bse118I RCCGGY 2 cut(s) 700, 871
Bse1I ACTGG 2 cut(s) 14, 852
Bse3DI GCAATG 1 cut(s) 1014
BseAI TCCGGA 1 cut(s) 1072
BseBI CCWGG 1 cut(s) 48
BseDI CCNNGG 4 cut(s) 57, 648, 711, 1242
BseGI GGATG 5 cut(s) 52, 186, 362, 656, 728
BseLI CCNNNNNNNGG 4 cut(s) 58, 375, 776, 947
BseMI GCAATG 1 cut(s) 1014
BseMII CTCAG 4 cut(s) 306, 753, 798, 990
BseNI ACTGG 2 cut(s) 14, 852
BseRI GAGGAG 7 cut(s) 259, 465, 468, 471, 510, 564, 567
BseX3I CGGCCG 1 cut(s) 678
BseXI GCAGC 5 cut(s) 1048, 1051, 1093, 1321, 1324
Bsh1236I CGCG 2 cut(s) 955, 1231
Bsh1285I CGRYCG 1 cut(s) 681
BshNI GGYRCC 2 cut(s) 697, 772
BsiEI CGRYCG 1 cut(s) 681
BsiHKAI GWGCWC 1 cut(s) 106
BslI CCNNNNNNNGG 4 cut(s) 58, 375, 776, 947
BsmAI GTCTC 3 cut(s) 311, 477, 982
BsmBI CGTCTC 1 cut(s) 477
Bso31I GGTCTC 1 cut(s) 311
Bsp1286I GDGCHC 2 cut(s) 106, 155
Bsp13I TCCGGA 1 cut(s) 1072
Bsp143I GATC 3 cut(s) 232, 423, 683
BspCNI CTCAG 4 cut(s) 307, 752, 797, 991
BspEI TCCGGA 1 cut(s) 1072
BspFNI CGCG 2 cut(s) 955, 1231
BspLI GGNNCC 7 cut(s) 14, 217, 685, 699, 774, 781, 819
BspPI GGATC 4 cut(s) 240, 418, 678, 691
BspQI GCTCTTC 1 cut(s) 143
BspT107I GGYRCC 2 cut(s) 697, 772
BspTNI GGTCTC 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 866
BsrDI GCAATG 1 cut(s) 1014
BsrFI RCCGGY 2 cut(s) 700, 871
BsrI ACTGG 2 cut(s) 14, 852
BssAI RCCGGY 2 cut(s) 700, 871
BssECI CCNNGG 4 cut(s) 57, 648, 711, 1242
BssMI GATC 3 cut(s) 232, 423, 683
BssNI GRCGYC 2 cut(s) 698, 704
BssT1I CCWWGG 2 cut(s) 57, 1242
Bst2UI CCWGG 1 cut(s) 48
Bst4CI ACNGT 1 cut(s) 1221
Bst6I CTCTTC 1 cut(s) 143
BstACI GRCGYC 2 cut(s) 698, 704
BstAPI GCANNNNNTGC 1 cut(s) 758
BstC8I GCNNGC 5 cut(s) 702, 873, 1153, 1322, 1326
BstDEI CTNAG 5 cut(s) 315, 388, 739, 784, 999
BstF5I GGATG 5 cut(s) 52, 186, 362, 656, 728
BstFNI CGCG 2 cut(s) 955, 1231
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 3 cut(s) 700, 1111, 1231
BstKTI GATC 3 cut(s) 235, 426, 686
BstMAI GTCTC 3 cut(s) 311, 477, 982
BstMBI GATC 3 cut(s) 232, 423, 683
BstMCI CGRYCG 1 cut(s) 681
BstMWI GCNNNNNNNGC 9 cut(s) 110, 236, 299, 686, 695, 758, 872, 1115, 1334
BstNI CCWGG 1 cut(s) 48
BstSCI CCNGG 5 cut(s) 46, 648, 768, 775, 813
BstSFI CTRYAG 1 cut(s) 595
BstUI CGCG 2 cut(s) 955, 1231
BstV1I GCAGC 5 cut(s) 1048, 1051, 1093, 1321, 1324
BstV2I GAAGAC 1 cut(s) 699
BstX2I RGATCY 2 cut(s) 232, 683
BstXI CCANNNNNNTGG 1 cut(s) 1121
BstYI RGATCY 2 cut(s) 232, 683
BstZI CGGCCG 1 cut(s) 678
BsuI GTATCC 1 cut(s) 51
BtsCI GGATG 5 cut(s) 52, 186, 362, 656, 728
BtsIMutI CAGTG 1 cut(s) 7
Cac8I GCNNGC 5 cut(s) 702, 873, 1153, 1322, 1326
CfoI GCGC 3 cut(s) 700, 1111, 1231
Cfr10I RCCGGY 2 cut(s) 700, 871
Cfr13I GGNCC 7 cut(s) 4, 13, 77, 410, 715, 779, 938
CseI GACGC 2 cut(s) 693, 1067
Csp6I GTAC 4 cut(s) 672, 773, 951, 1125
CviAII CATG 2 cut(s) 395, 1343
CviQI GTAC 4 cut(s) 672, 773, 951, 1125
DdeI CTNAG 5 cut(s) 315, 388, 739, 784, 999
DinI GGCGCC 1 cut(s) 699
DpnI GATC 3 cut(s) 234, 425, 685
DpnII GATC 3 cut(s) 232, 423, 683
DriI GACNNNNNGTC 1 cut(s) 919
EaeI YGGCCR 4 cut(s) 678, 873, 966, 1239
EagI CGGCCG 1 cut(s) 678
Eam1104I CTCTTC 1 cut(s) 143
Eam1105I GACNNNNNGTC 1 cut(s) 919
EarI CTCTTC 1 cut(s) 143
EciI GGCGGA 2 cut(s) 676, 858
EclXI CGGCCG 1 cut(s) 678
Eco130I CCWWGG 2 cut(s) 57, 1242
Eco24I GRGCYC 1 cut(s) 155
Eco31I GGTCTC 1 cut(s) 311
Eco47I GGWCC 4 cut(s) 13, 715, 779, 938
Eco52I CGGCCG 1 cut(s) 678
Eco57I CTGAAG 1 cut(s) 147
EcoRI GAATTC 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 46
EcoT14I CCWWGG 2 cut(s) 57, 1242
EcoT38I GRGCYC 1 cut(s) 155
EgeI GGCGCC 1 cut(s) 699
EheI GGCGCC 1 cut(s) 699
ErhI CCWWGG 2 cut(s) 57, 1242
Esp3I CGTCTC 1 cut(s) 477
FaeI CATG 2 cut(s) 398, 1346
FatI CATG 2 cut(s) 394, 1342
FauI CCCGC 2 cut(s) 757, 802
FblI GTMKAC 1 cut(s) 1269
Fnu4HI GCNGC 7 cut(s) 294, 409, 1062, 1065, 1107, 1335, 1338
FokI GGATG 5 cut(s) 39, 173, 349, 643, 715
FriOI GRGCYC 1 cut(s) 155
Fsp4HI GCNGC 7 cut(s) 294, 409, 1062, 1065, 1107, 1335, 1338
FspBI CTAG 2 cut(s) 935, 1360
GlaI GCGC 3 cut(s) 699, 1110, 1230
GluI GCNGC 7 cut(s) 294, 409, 1062, 1065, 1107, 1335, 1338
HaeII RGCGCY 1 cut(s) 701
HgaI GACGC 2 cut(s) 693, 1067
HhaI GCGC 3 cut(s) 700, 1111, 1231
Hin1I GRCGYC 2 cut(s) 698, 704
Hin1II CATG 2 cut(s) 398, 1346
Hin6I GCGC 3 cut(s) 698, 1109, 1229
HinP1I GCGC 3 cut(s) 698, 1109, 1229
HincII GTYRAC 1 cut(s) 1270
HindII GTYRAC 1 cut(s) 1270
HindIII AAGCTT 1 cut(s) 207
HinfI GANTC 3 cut(s) 443, 653, 1132
HphI GGTGA 3 cut(s) 346, 560, 1243
Hpy166II GTNNAC 2 cut(s) 266, 1270
Hpy188I TCNGA 9 cut(s) 127, 370, 715, 766, 811, 942, 1057, 1099, 1204
Hpy188III TCNNGA 2 cut(s) 1073, 1277
Hpy8I GTNNAC 2 cut(s) 266, 1270
Hpy99I CGWCG 3 cut(s) 307, 849, 1061
HpyAV CCTTC 8 cut(s) 117, 336, 522, 558, 567, 811, 1256, 1294
HpyCH4III ACNGT 1 cut(s) 1221
HpyCH4IV ACGT 2 cut(s) 271, 891
HpyCH4V TGCA 1 cut(s) 1093
HpyF10VI GCNNNNNNNGC 9 cut(s) 110, 236, 299, 686, 695, 758, 872, 1115, 1334
HpyF3I CTNAG 5 cut(s) 315, 388, 739, 784, 999
HpySE526I ACGT 2 cut(s) 271, 891
Hsp92I GRCGYC 2 cut(s) 698, 704
Hsp92II CATG 2 cut(s) 398, 1346
HspAI GCGC 3 cut(s) 698, 1109, 1229
KasI GGCGCC 1 cut(s) 697
Kpn2I TCCGGA 1 cut(s) 1072
KpnI GGTACC 1 cut(s) 776
KroI GCCGGC 2 cut(s) 700, 871
KroNI GCCGGC 2 cut(s) 702, 873
Kzo9I GATC 3 cut(s) 232, 423, 683
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 3 cut(s) 109, 871, 1116
Lsp1109I GCAGC 5 cut(s) 1048, 1051, 1093, 1321, 1324
MaeI CTAG 2 cut(s) 935, 1360
MaeII ACGT 2 cut(s) 271, 891
MaeIII GTNAC 4 cut(s) 130, 928, 1033, 1350
MalI GATC 3 cut(s) 234, 425, 685
MbiI CCGCTC 1 cut(s) 866
MboI GATC 3 cut(s) 232, 423, 683
MboII GAAGA 5 cut(s) 160, 319, 507, 699, 833
MfeI CAATTG 1 cut(s) 1256
MflI RGATCY 2 cut(s) 232, 683
MhlI GDGCHC 2 cut(s) 106, 155
MlsI TGGCCA 2 cut(s) 968, 1241
MluCI AATT 9 cut(s) 70, 82, 91, 167, 176, 414, 878, 970, 1256
MluI ACGCGT 1 cut(s) 953
MluNI TGGCCA 2 cut(s) 968, 1241
Mly113I GGCGCC 1 cut(s) 698
MlyI GAGTC 1 cut(s) 1126
MmeI TCCRAC 5 cut(s) 393, 629, 789, 965, 1080
Mox20I TGGCCA 2 cut(s) 968, 1241
MreI CGCCGGCG 1 cut(s) 700
MroI TCCGGA 1 cut(s) 1072
MroNI GCCGGC 2 cut(s) 700, 871
MscI TGGCCA 2 cut(s) 968, 1241
Msp20I TGGCCA 2 cut(s) 968, 1241
MspR9I CCNGG 5 cut(s) 48, 650, 770, 777, 815
MunI CAATTG 1 cut(s) 1256
MvaI CCWGG 1 cut(s) 48
MvnI CGCG 2 cut(s) 955, 1231
MwoI GCNNNNNNNGC 9 cut(s) 110, 236, 299, 686, 695, 758, 872, 1115, 1334
NaeI GCCGGC 2 cut(s) 702, 873
NarI GGCGCC 1 cut(s) 698
NciI CCSGG 4 cut(s) 650, 770, 777, 815
NdeII GATC 3 cut(s) 232, 423, 683
NgoMIV GCCGGC 2 cut(s) 700, 871
NlaIII CATG 2 cut(s) 398, 1346
NlaIV GGNNCC 7 cut(s) 14, 217, 685, 699, 774, 781, 819
NmuCI GTSAC 3 cut(s) 928, 1033, 1350
PciSI GCTCTTC 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 938
PdiI GCCGGC 2 cut(s) 702, 873
PfeI GAWTC 2 cut(s) 443, 653
PkrI GCNGC 7 cut(s) 295, 410, 1063, 1066, 1108, 1336, 1339
PleI GAGTC 1 cut(s) 1126
PluTI GGCGCC 1 cut(s) 701
PpsI GAGTC 1 cut(s) 1126
PsiI TTATAA 1 cut(s) 27
Psp6I CCWGG 1 cut(s) 46
PspGI CCWGG 1 cut(s) 46
PspN4I GGNNCC 7 cut(s) 14, 217, 685, 699, 774, 781, 819
PspPI GGNCC 7 cut(s) 4, 13, 77, 410, 715, 779, 938
PsuI RGATCY 2 cut(s) 232, 683
RsaI GTAC 4 cut(s) 673, 774, 952, 1126
RsaNI GTAC 4 cut(s) 672, 773, 951, 1125
SalI GTCGAC 1 cut(s) 1268
SapI GCTCTTC 1 cut(s) 143
SatI GCNGC 7 cut(s) 294, 409, 1062, 1065, 1107, 1335, 1338
Sau3AI GATC 3 cut(s) 232, 423, 683
Sau96I GGNCC 7 cut(s) 4, 13, 77, 410, 715, 779, 938
SchI GAGTC 1 cut(s) 1126
ScrFI CCNGG 5 cut(s) 48, 650, 770, 777, 815
SduI GDGCHC 2 cut(s) 106, 155
SfcI CTRYAG 1 cut(s) 595
SfoI GGCGCC 1 cut(s) 699
SgrAI CRCCGGYG 1 cut(s) 700
SinI GGWCC 4 cut(s) 13, 715, 779, 938
SmlI CTYRAG 1 cut(s) 1020
SmoI CTYRAG 1 cut(s) 1020
Sse9I AATT 9 cut(s) 70, 82, 91, 167, 176, 414, 878, 970, 1256
SspDI GGCGCC 1 cut(s) 697
SspMI CTAG 2 cut(s) 935, 1360
StyD4I CCNGG 5 cut(s) 46, 648, 768, 775, 813
StyI CCWWGG 2 cut(s) 57, 1242
TaaI ACNGT 1 cut(s) 1221
TaiI ACGT 2 cut(s) 274, 894
TaqI TCGA 2 cut(s) 1174, 1269
TasI AATT 9 cut(s) 70, 82, 91, 167, 176, 414, 878, 970, 1256
TauI GCSGC 2 cut(s) 296, 411
TfiI GAWTC 2 cut(s) 443, 653
TscAI CASTG 1 cut(s) 14
TseFI GTSAC 3 cut(s) 928, 1033, 1350
TseI GCWGC 5 cut(s) 1061, 1064, 1106, 1334, 1337
Tsp45I GTSAC 3 cut(s) 928, 1033, 1350
TspDTI ATGAA 5 cut(s) 152, 219, 645, 1003, 1101
TspRI CASTG 1 cut(s) 14
VpaK11BI GGWCC 4 cut(s) 13, 715, 779, 938
XapI RAATTY 2 cut(s) 70, 82
XmiI GTMKAC 1 cut(s) 1269
XspI CTAG 2 cut(s) 935, 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.