Rw3G020890
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000106
Physical Location & Seq
Forward (+)
24971936 .. 24973362
1427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020890.1

Sequence Viewer

Length: 1131 bp
ATGGCAATTGGTGATGAATTTTTCTCTGAAACTCCTAATAGTGGAATTGGCACCAGCAACACTTCCTCTGATGACACTGCCAATCCGTTTTTCCTTCATCATTCAGACCATCCCGATCTTCTGCTTGTCTCCAAGAAATTGTCAGGTGACAATTATAACTCATGGTGTCATGCTATGAGGATATCCCTAAGTGCCAAGAACAAAACCGGCTTCATCAACGGAACCATTAAAGAACCCTCTGCAGAAAAGAAACCTGATGAACATGCACTATGGCAAAGGTACAATGACATGGTGCTTTCATGGATTCTCAACTCTCTTGAACCTGAGCTTGCCGATTCAGTGCTCTGCTGCACCACACCACATGCAGTTTGGGAAGATCTGCGAGAGAGATTCGCGTTGGGCATTTCCCCTCGCATATTTCAAGTTCAAAGAGACATTTATCGTATTGAACAAGGTCAATCATCCATTGTAGCATACTACACAAAGCTAAAAGGCTTATGGGACAAGCTTGCTTTGTACAACACTGTCACTTGCACGTGTGGAGCGCAAAATGATCGCAGTAAGTTGATGCAATTTCTTATGGGCTTAAATGAATCTTATGCTGCTACTCGTGGACAGATTTTGTTGATGAACCCTTTGCCTTCGGTGAGACAAGCTTATGCTTCCCTCGTCCAAGAAGAAAAACAACGTGAACTTGGTTCTTCTCTTACTGCCCCATCTAACACCGCAGCGATGGCAGTACACAGCAACTTTAGATCACAACCTCAGATGCAAGGGAATCAAGGCAATACCCAAGGCATCAATTTTCGTCCTCGTGCCCCAATCAAGCATTGCACTTATTGTGACAAGGATTATCATACTGAAGCAACTTGCCATAGAAAGCATGATTATCCTCCTGGTCATCGTCTCTACAAAGGACCTAAGGAAGCTAATACTGCAAGACAACGTCGAGGAAGTACCTCTGCTAATCATGTTGATGCCACCCCAACATTCCAGGAACTTCAAGGAATGCTTCCTAATCTCACTGATGCTCAATACACTCAAGTAATTGCTGCCTTGACTCCTACACCGCAAATTCCTCAAGCCAATGCTACAGGACTTGGCTACGAGGACGATGATTGGTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

376

Amino Acids

42.02

Weight (kDa)

6.5

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 33 - 80 6.4e-18 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 59 - 232 4.9e-07 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AccB1I GGYRCC 1 cut(s) 50
AccII CGCG 1 cut(s) 395
AciI CCGC 2 cut(s) 726, 1070
AcsI RAATTY 2 cut(s) 17, 1074
AcuI CTGAAG 1 cut(s) 882
AcvI CACGTG 1 cut(s) 537
AfaI GTAC 4 cut(s) 281, 518, 741, 958
AfiI CCNNNNNNNGG 1 cut(s) 41
AflIII ACRYGT 1 cut(s) 536
AgsI TTSAA 5 cut(s) 320, 422, 428, 449, 1004
AjnI CCWGG 2 cut(s) 895, 993
AjuI GAANNNNNNNTTGG 2 cut(s) 74, 106
AluBI AGCT 5 cut(s) 328, 487, 508, 656, 929
AluI AGCT 5 cut(s) 328, 487, 508, 656, 929
Alw21I GWGCWC 1 cut(s) 345
Alw26I GTCTC 4 cut(s) 133, 426, 643, 911
ApeKI GCWGC 4 cut(s) 348, 602, 728, 1052
ApoI RAATTY 2 cut(s) 17, 1074
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 1 cut(s) 917
AsuHPI GGTGA 3 cut(s) 23, 158, 658
AvaII GGWCC 1 cut(s) 917
AxyI CCTNAGG 1 cut(s) 921
BaeGI GKGCMC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 50
BauI CACGAG 2 cut(s) 609, 813
BbrPI CACGTG 1 cut(s) 537
Bbv12I GWGCWC 1 cut(s) 345
BbvI GCAGC 4 cut(s) 335, 589, 740, 1039
BccI CCATC 3 cut(s) 117, 724, 727
BcgI CGANNNNNNTGC 2 cut(s) 536, 570
BciT130I CCWGG 2 cut(s) 897, 995
BcoDI GTCTC 4 cut(s) 133, 426, 643, 911
BfmI CTRYAG 2 cut(s) 240, 1092
BglII AGATCT 1 cut(s) 376
BisI GCNGC 4 cut(s) 349, 603, 729, 1053
BlsI GCNGC 4 cut(s) 350, 604, 730, 1054
Bme1390I CCNGG 2 cut(s) 897, 995
Bme18I GGWCC 1 cut(s) 917
BmgT120I GGNCC 1 cut(s) 917
BmiI GGNNCC 2 cut(s) 52, 223
BmrFI CCNGG 2 cut(s) 897, 995
BmsI GCATC 5 cut(s) 558, 759, 807, 967, 1018
Bpu10I CCTNAGC 1 cut(s) 324
BpuEI CTTGAG 2 cut(s) 1026, 1065
BsaAI YACGTR 1 cut(s) 537
BsaJI CCNNGG 1 cut(s) 793
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse118I RCCGGY 1 cut(s) 206
Bse21I CCTNAGG 1 cut(s) 921
Bse3DI GCAATG 1 cut(s) 829
BseBI CCWGG 2 cut(s) 897, 995
BseDI CCNNGG 1 cut(s) 793
BseGI GGATG 2 cut(s) 109, 461
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMI GCAATG 1 cut(s) 829
BseMII CTCAG 2 cut(s) 315, 779
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 4 cut(s) 335, 589, 740, 1039
BsgI GTGCAG 1 cut(s) 334
Bsh1236I CGCG 1 cut(s) 395
BshNI GGYRCC 1 cut(s) 50
BsiHKAI GWGCWC 1 cut(s) 345
BsiSI CCGG 1 cut(s) 207
BslFI GGGAC 1 cut(s) 515
BslI CCNNNNNNNGG 1 cut(s) 41
BsmAI GTCTC 4 cut(s) 133, 426, 643, 911
BsmBI CGTCTC 1 cut(s) 911
BsmFI GGGAC 1 cut(s) 515
BsmI GAATGC 1 cut(s) 1014
Bsp1286I GDGCHC 2 cut(s) 345, 820
Bsp1407I TGTACA 1 cut(s) 516
Bsp143I GATC 4 cut(s) 115, 376, 553, 755
BspACI CCGC 2 cut(s) 726, 1070
BspCNI CTCAG 2 cut(s) 316, 778
BspFNI CGCG 1 cut(s) 395
BspLI GGNNCC 2 cut(s) 52, 223
BspMAI CTGCAG 1 cut(s) 244
BspT107I GGYRCC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 829
BsrFI RCCGGY 1 cut(s) 206
BsrGI TGTACA 1 cut(s) 516
BssAI RCCGGY 1 cut(s) 206
BssECI CCNNGG 1 cut(s) 793
BssMI GATC 4 cut(s) 115, 376, 553, 755
BssSI CACGAG 2 cut(s) 609, 813
BssT1I CCWWGG 1 cut(s) 793
Bst2BI CACGAG 2 cut(s) 609, 813
Bst2UI CCWGG 2 cut(s) 897, 995
Bst4CI ACNGT 1 cut(s) 526
BstAUI TGTACA 1 cut(s) 516
BstBAI YACGTR 1 cut(s) 537
BstC8I GCNNGC 2 cut(s) 330, 510
BstDEI CTNAG 4 cut(s) 188, 324, 765, 921
BstF5I GGATG 2 cut(s) 109, 461
BstFNI CGCG 1 cut(s) 395
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 4 cut(s) 118, 379, 556, 758
BstMAI GTCTC 4 cut(s) 133, 426, 643, 911
BstMBI GATC 4 cut(s) 115, 376, 553, 755
BstMWI GCNNNNNNNGC 2 cut(s) 734, 935
BstNI CCWGG 2 cut(s) 897, 995
BstNSI RCATGY 2 cut(s) 266, 365
BstSCI CCNGG 2 cut(s) 895, 993
BstSFI CTRYAG 2 cut(s) 240, 1092
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 395
BstV1I GCAGC 4 cut(s) 335, 589, 740, 1039
BstX2I RGATCY 1 cut(s) 376
BstYI RGATCY 1 cut(s) 376
Bsu36I CCTNAGG 1 cut(s) 921
BtgZI GCGATG 1 cut(s) 746
BtsCI GGATG 2 cut(s) 109, 461
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 4 cut(s) 75, 345, 522, 1023
Cac8I GCNNGC 2 cut(s) 330, 510
CfoI GCGC 1 cut(s) 547
Cfr10I RCCGGY 1 cut(s) 206
Cfr13I GGNCC 1 cut(s) 917
Csp6I GTAC 4 cut(s) 280, 517, 740, 957
CviAII CATG 8 cut(s) 162, 170, 263, 289, 300, 362, 884, 971
CviQI GTAC 4 cut(s) 280, 517, 740, 957
DdeI CTNAG 4 cut(s) 188, 324, 765, 921
DpnI GATC 4 cut(s) 117, 378, 555, 757
DpnII GATC 4 cut(s) 115, 376, 553, 755
Eco130I CCWWGG 1 cut(s) 793
Eco32I GATATC 1 cut(s) 183
Eco47I GGWCC 1 cut(s) 917
Eco57I CTGAAG 1 cut(s) 882
Eco72I CACGTG 1 cut(s) 537
Eco81I CCTNAGG 1 cut(s) 921
EcoO109I RGGNCCY 1 cut(s) 917
EcoRII CCWGG 2 cut(s) 895, 993
EcoRV GATATC 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 793
ErhI CCWWGG 1 cut(s) 793
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 8 cut(s) 165, 173, 266, 292, 303, 365, 887, 974
FalI AAGNNNNNCTT 2 cut(s) 996, 1028
FaqI GGGAC 1 cut(s) 515
FatI CATG 8 cut(s) 161, 169, 262, 288, 299, 361, 883, 970
Fnu4HI GCNGC 4 cut(s) 349, 603, 729, 1053
FokI GGATG 2 cut(s) 96, 448
Fsp4HI GCNGC 4 cut(s) 349, 603, 729, 1053
GlaI GCGC 1 cut(s) 546
GluI GCNGC 4 cut(s) 349, 603, 729, 1053
HapII CCGG 1 cut(s) 207
HhaI GCGC 1 cut(s) 547
Hin1II CATG 8 cut(s) 165, 173, 266, 292, 303, 365, 887, 974
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HindIII AAGCTT 2 cut(s) 506, 654
HinfI GANTC 6 cut(s) 304, 335, 390, 593, 778, 1060
HpaII CCGG 1 cut(s) 207
HphI GGTGA 3 cut(s) 23, 158, 658
Hpy166II GTNNAC 3 cut(s) 614, 692, 742
Hpy188I TCNGA 4 cut(s) 28, 70, 106, 768
Hpy188III TCNNGA 2 cut(s) 113, 317
Hpy8I GTNNAC 3 cut(s) 614, 692, 742
Hpy99I CGWCG 1 cut(s) 951
HpyAV CCTTC 2 cut(s) 104, 651
HpyCH4III ACNGT 1 cut(s) 526
HpyCH4IV ACGT 3 cut(s) 536, 688, 946
HpyCH4V TGCA 9 cut(s) 242, 266, 351, 365, 534, 571, 772, 834, 938
HpyF10VI GCNNNNNNNGC 2 cut(s) 734, 935
HpyF3I CTNAG 4 cut(s) 188, 324, 765, 921
HpySE526I ACGT 3 cut(s) 536, 688, 946
Hsp92II CATG 8 cut(s) 165, 173, 266, 292, 303, 365, 887, 974
HspAI GCGC 1 cut(s) 545
Kzo9I GATC 4 cut(s) 115, 376, 553, 755
LmnI GCTCC 1 cut(s) 542
Lsp1109I GCAGC 4 cut(s) 335, 589, 740, 1039
LweI GCATC 5 cut(s) 558, 759, 807, 967, 1018
MaeII ACGT 3 cut(s) 536, 688, 946
MaeIII GTNAC 3 cut(s) 146, 526, 842
MalI GATC 4 cut(s) 117, 378, 555, 757
MboI GATC 4 cut(s) 115, 376, 553, 755
MboII GAAGA 4 cut(s) 110, 386, 689, 693
MfeI CAATTG 1 cut(s) 6
MflI RGATCY 1 cut(s) 376
MhlI GDGCHC 2 cut(s) 345, 820
MluCI AATT 9 cut(s) 6, 17, 45, 137, 151, 572, 802, 1047, 1074
MlyI GAGTC 1 cut(s) 1054
MseI TTAA 2 cut(s) 228, 587
MslI CAYNNNNRTG 1 cut(s) 975
MspI CCGG 1 cut(s) 207
MspR9I CCNGG 2 cut(s) 897, 995
MunI CAATTG 1 cut(s) 6
Mva1269I GAATGC 1 cut(s) 1014
MvaI CCWGG 2 cut(s) 897, 995
MvnI CGCG 1 cut(s) 395
MwoI GCNNNNNNNGC 2 cut(s) 734, 935
NdeII GATC 4 cut(s) 115, 376, 553, 755
NlaIII CATG 8 cut(s) 165, 173, 266, 292, 303, 365, 887, 974
NlaIV GGNNCC 2 cut(s) 52, 223
NmuCI GTSAC 3 cut(s) 146, 526, 842
NspI RCATGY 2 cut(s) 266, 365
PctI GAATGC 1 cut(s) 1014
PfeI GAWTC 5 cut(s) 304, 335, 390, 593, 778
PflFI GACNNNGTC 1 cut(s) 945
PfoI TCCNGGA 1 cut(s) 993
PkrI GCNGC 4 cut(s) 350, 604, 730, 1054
PleI GAGTC 1 cut(s) 1054
PmaCI CACGTG 1 cut(s) 537
PmlI CACGTG 1 cut(s) 537
PpsI GAGTC 1 cut(s) 1054
Ppu21I YACGTR 1 cut(s) 537
PpuMI RGGWCCY 1 cut(s) 917
PsiI TTATAA 1 cut(s) 156
Psp5II RGGWCCY 1 cut(s) 917
Psp6I CCWGG 2 cut(s) 895, 993
PspCI CACGTG 1 cut(s) 537
PspGI CCWGG 2 cut(s) 895, 993
PspN4I GGNNCC 2 cut(s) 52, 223
PspPI GGNCC 1 cut(s) 917
PspPPI RGGWCCY 1 cut(s) 917
PstI CTGCAG 1 cut(s) 244
PsuI RGATCY 1 cut(s) 376
PsyI GACNNNGTC 1 cut(s) 945
RsaI GTAC 4 cut(s) 281, 518, 741, 958
RsaNI GTAC 4 cut(s) 280, 517, 740, 957
RseI CAYNNNNRTG 1 cut(s) 975
SaqAI TTAA 2 cut(s) 228, 587
SatI GCNGC 4 cut(s) 349, 603, 729, 1053
Sau3AI GATC 4 cut(s) 115, 376, 553, 755
Sau96I GGNCC 1 cut(s) 917
SchI GAGTC 1 cut(s) 1054
ScrFI CCNGG 2 cut(s) 897, 995
SduI GDGCHC 2 cut(s) 345, 820
SfaNI GCATC 5 cut(s) 558, 759, 807, 967, 1018
SfcI CTRYAG 2 cut(s) 240, 1092
SinI GGWCC 1 cut(s) 917
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 2 cut(s) 1041, 1080
SmoI CTYRAG 2 cut(s) 1041, 1080
Sse9I AATT 9 cut(s) 6, 17, 45, 137, 151, 572, 802, 1047, 1074
SsiI CCGC 2 cut(s) 726, 1070
StyD4I CCNGG 2 cut(s) 895, 993
StyI CCWWGG 1 cut(s) 793
TaaI ACNGT 1 cut(s) 526
TaiI ACGT 3 cut(s) 539, 691, 949
TaqI TCGA 1 cut(s) 949
TasI AATT 9 cut(s) 6, 17, 45, 137, 151, 572, 802, 1047, 1074
TatI WGTACW 2 cut(s) 516, 739
TfiI GAWTC 5 cut(s) 304, 335, 390, 593, 778
Tru1I TTAA 2 cut(s) 228, 587
Tru9I TTAA 2 cut(s) 228, 587
TscAI CASTG 4 cut(s) 82, 345, 529, 1030
TseFI GTSAC 3 cut(s) 146, 526, 842
TseI GCWGC 4 cut(s) 348, 602, 728, 1052
Tsp45I GTSAC 3 cut(s) 146, 526, 842
TspDTI ATGAA 7 cut(s) 30, 86, 202, 273, 288, 606, 644
TspGWI ACGGA 2 cut(s) 75, 234
TspRI CASTG 4 cut(s) 82, 345, 529, 1030
Tth111I GACNNNGTC 1 cut(s) 945
VpaK11BI GGWCC 1 cut(s) 917
XapI RAATTY 2 cut(s) 17, 1074
XceI RCATGY 2 cut(s) 266, 365
XcmI CCANNNNNNNNNTGG 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.