FvH4_3g30981

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000106
Physical Location & Seq
Forward (+)
24644393 .. 24645419
1027 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g30981.t1

Sequence Viewer

Length: 942 bp
ATGTCCGATGATGATATCCCTCCACCGAAATCAAGCGGTGATAATCCTCCTCCACCGAAATCAGGCGGTGATAATCCTCCTCCACCAAAACCAAACAGTTCCGGTTCAGATGCAGATCCCTTCAAGGCAGAACCTTCTAATCCTTACTTCATCCACCACTCGGATCATCCTGGCTTAGTCCTAGTCTCCAAACTCCTAAATGGGGATAATTTTTCTGGTTGGAAAAGGTCTATGGTTAGAGCCTTAAATTCCAATAACAAGCTCGGATTCGTCAACGGTTCCATCAAGGCTCCCTCAGAAGAAACTGACCCTGAAGGCTATGCGATTTGGTCGCGTTGCAATGATATGGTTCATTCCTGGATCGTCAACTCTTGTGATCCAGAAATAGCTGACAGTGTGACCTACTATCCTAATGCTCATGAAGTTTGGGAGGATCTCCATGAGCGTTTTTCTCAAGCGAATGCGACTCGCATTTTCGAAATACAACGAGAAATTGCTTCTCATCGTCAAGAACAACTCCCTGTCTCTACCTACTACACAAAATTGAAGAGTTTCTGGGATGAATTGGCCACATATTCAGACACAGCACATGGAGCACAAGCAGATCAACAGCGATTGATGCAATTCTTAATGGGATTAAATGAGACTTACAGTGCAATTCGCAGACAGATCCTATTGATGAATCCTCTCCCTACTGTTCGCCAAGCATATGCTGCTATATCTCAAGAAGAAAAACAACTTCTCAGCGTTTCACACACCACATCAGAACTGGATTCAAGCGCAGCCATGGCGAAGGACGCTCTTCTTTTGCGTCTCAAGAAGTGCGTCGATCCATGGGCCGAGGTAGAGGCAAGCCTCAGTGTGTTAATTGTGGAGACATGGGCCATTGGGTCCAAACGTGCTATCAACTCATTGGACATCCACCAGGCCATCCTAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_3

Protein Analysis

314

Amino Acids

34.84

Weight (kDa)

5.37

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 52 - 99 3.4e-21 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 82 - 246 8.8e-10 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 334
AciI CCGC 2 cut(s) 36, 66
AclWI GGATC 7 cut(s) 110, 171, 368, 371, 441, 664, 824
AcoI YGGCCR 1 cut(s) 567
AcsI RAATTY 1 cut(s) 247
AcuI CTGAAG 1 cut(s) 333
AfiI CCNNNNNNNGG 3 cut(s) 62, 160, 202
AgsI TTSAA 3 cut(s) 124, 547, 777
AjnI CCWGG 3 cut(s) 169, 356, 924
AluBI AGCT 2 cut(s) 262, 389
AluI AGCT 2 cut(s) 262, 389
Alw21I GWGCWC 1 cut(s) 598
Alw26I GTCTC 5 cut(s) 190, 529, 638, 818, 869
AlwI GGATC 7 cut(s) 110, 171, 368, 371, 441, 664, 824
AoxI GGCC 4 cut(s) 567, 837, 882, 927
ApeKI GCWGC 2 cut(s) 713, 782
ApoI RAATTY 1 cut(s) 247
Asp700I GAANNNNTTC 1 cut(s) 551
AspLEI GCGC 1 cut(s) 782
AspS9I GGNCC 3 cut(s) 837, 882, 891
AsuHPI GGTGA 2 cut(s) 50, 80
AsuII TTCGAA 1 cut(s) 477
AvaII GGWCC 1 cut(s) 891
BalI TGGCCA 1 cut(s) 569
Bbv12I GWGCWC 1 cut(s) 598
BbvI GCAGC 2 cut(s) 700, 794
BccI CCATC 2 cut(s) 290, 938
BciT130I CCWGG 3 cut(s) 171, 358, 926
BcoDI GTCTC 5 cut(s) 190, 529, 638, 818, 869
BfaI CTAG 1 cut(s) 182
BisI GCNGC 2 cut(s) 714, 783
BlsI GCNGC 2 cut(s) 715, 784
Bme1390I CCNGG 3 cut(s) 171, 358, 926
Bme18I GGWCC 1 cut(s) 891
BmgT120I GGNCC 3 cut(s) 837, 882, 891
BmiI GGNNCC 3 cut(s) 280, 291, 892
BmrFI CCNGG 3 cut(s) 171, 358, 926
BmsI GCATC 2 cut(s) 100, 609
Bpu14I TTCGAA 1 cut(s) 477
BpuEI CTTGAG 3 cut(s) 438, 708, 800
BsaBI GATNNNNATC 1 cut(s) 114
BsaJI CCNNGG 3 cut(s) 786, 833, 840
BsaWI WCCGGW 1 cut(s) 101
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 160, 202
Bse1I ACTGG 1 cut(s) 774
Bse3DI GCAATG 1 cut(s) 346
Bse8I GATNNNNATC 1 cut(s) 114
BseBI CCWGG 3 cut(s) 171, 358, 926
BseDI CCNNGG 3 cut(s) 786, 833, 840
BseGI GGATG 5 cut(s) 150, 166, 565, 918, 930
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 3 cut(s) 62, 160, 202
BseMI GCAATG 1 cut(s) 346
BseMII CTCAG 3 cut(s) 309, 757, 871
BseNI ACTGG 1 cut(s) 774
BseRI GAGGAG 2 cut(s) 39, 69
BseXI GCAGC 2 cut(s) 700, 794
Bsh1236I CGCG 1 cut(s) 334
BshFI GGCC 4 cut(s) 569, 839, 884, 929
BsiHKAI GWGCWC 1 cut(s) 598
BsiSI CCGG 1 cut(s) 102
BslI CCNNNNNNNGG 3 cut(s) 62, 160, 202
BsmAI GTCTC 5 cut(s) 190, 529, 638, 818, 869
BsmBI CGTCTC 1 cut(s) 818
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 4 cut(s) 569, 839, 884, 929
Bsp119I TTCGAA 1 cut(s) 477
Bsp1286I GDGCHC 1 cut(s) 598
Bsp143I GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
Bsp19I CCATGG 2 cut(s) 786, 833
BspACI CCGC 2 cut(s) 36, 66
BspANI GGCC 4 cut(s) 569, 839, 884, 929
BspCNI CTCAG 3 cut(s) 308, 756, 870
BspFNI CGCG 1 cut(s) 334
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 3 cut(s) 280, 291, 892
BspPI GGATC 7 cut(s) 110, 171, 368, 371, 441, 664, 824
BspQI GCTCTTC 1 cut(s) 807
BspT104I TTCGAA 1 cut(s) 477
BsrDI GCAATG 1 cut(s) 346
BsrI ACTGG 1 cut(s) 774
BssECI CCNNGG 3 cut(s) 786, 833, 840
BssMI GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
BssT1I CCWWGG 2 cut(s) 786, 833
Bst2UI CCWGG 3 cut(s) 171, 358, 926
Bst4CI ACNGT 5 cut(s) 98, 278, 395, 653, 697
Bst6I CTCTTC 2 cut(s) 542, 807
BstAPI GCANNNNNTGC 1 cut(s) 713
BstBI TTCGAA 1 cut(s) 477
BstC8I GCNNGC 1 cut(s) 853
BstDEI CTNAG 4 cut(s) 175, 295, 743, 857
BstDSI CCRYGG 2 cut(s) 786, 833
BstF5I GGATG 5 cut(s) 150, 166, 565, 918, 930
BstFNI CGCG 1 cut(s) 334
BstHHI GCGC 1 cut(s) 782
BstKTI GATC 8 cut(s) 118, 166, 363, 379, 436, 607, 672, 832
BstMAI GTCTC 5 cut(s) 190, 529, 638, 818, 869
BstMBI GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
BstMWI GCNNNNNNNGC 5 cut(s) 593, 619, 713, 788, 797
BstNI CCWGG 3 cut(s) 171, 358, 926
BstSCI CCNGG 3 cut(s) 169, 356, 924
BstUI CGCG 1 cut(s) 334
BstV1I GCAGC 2 cut(s) 700, 794
BstX2I RGATCY 3 cut(s) 115, 433, 669
BstYI RGATCY 3 cut(s) 115, 433, 669
BsuRI GGCC 4 cut(s) 569, 839, 884, 929
BtgI CCRYGG 2 cut(s) 786, 833
BtsCI GGATG 5 cut(s) 150, 166, 565, 918, 930
BtsIMutI CAGTG 3 cut(s) 400, 658, 865
Cac8I GCNNGC 1 cut(s) 853
CciI TCATGA 1 cut(s) 418
CfoI GCGC 1 cut(s) 782
Cfr13I GGNCC 3 cut(s) 837, 882, 891
CseI GACGC 3 cut(s) 800, 806, 814
CviAII CATG 6 cut(s) 419, 440, 590, 787, 834, 879
DdeI CTNAG 4 cut(s) 175, 295, 743, 857
DpnI GATC 8 cut(s) 117, 165, 362, 378, 435, 606, 671, 831
DpnII GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
EaeI YGGCCR 1 cut(s) 567
Eam1104I CTCTTC 2 cut(s) 542, 807
EarI CTCTTC 2 cut(s) 542, 807
Eco130I CCWWGG 2 cut(s) 786, 833
Eco32I GATATC 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 891
Eco57I CTGAAG 1 cut(s) 333
EcoRII CCWGG 3 cut(s) 169, 356, 924
EcoRV GATATC 1 cut(s) 16
EcoT14I CCWWGG 2 cut(s) 786, 833
ErhI CCWWGG 2 cut(s) 786, 833
Esp3I CGTCTC 1 cut(s) 818
FaeI CATG 6 cut(s) 422, 443, 593, 790, 837, 882
FatI CATG 6 cut(s) 418, 439, 589, 786, 833, 878
FauNDI CATATG 1 cut(s) 709
Fnu4HI GCNGC 2 cut(s) 714, 783
FokI GGATG 5 cut(s) 137, 153, 572, 905, 917
Fsp4HI GCNGC 2 cut(s) 714, 783
FspBI CTAG 1 cut(s) 182
GlaI GCGC 1 cut(s) 781
GluI GCNGC 2 cut(s) 714, 783
HaeIII GGCC 4 cut(s) 569, 839, 884, 929
HapII CCGG 1 cut(s) 102
HgaI GACGC 3 cut(s) 800, 806, 814
HhaI GCGC 1 cut(s) 782
Hin1II CATG 6 cut(s) 422, 443, 593, 790, 837, 882
Hin6I GCGC 1 cut(s) 780
HinP1I GCGC 1 cut(s) 780
HincII GTYRAC 2 cut(s) 274, 367
HindII GTYRAC 2 cut(s) 274, 367
HinfI GANTC 4 cut(s) 267, 466, 682, 773
HpaII CCGG 1 cut(s) 102
HphI GGTGA 2 cut(s) 50, 80
Hpy166II GTNNAC 2 cut(s) 274, 367
Hpy188I TCNGA 7 cut(s) 7, 109, 163, 266, 298, 580, 766
Hpy188III TCNNGA 5 cut(s) 380, 419, 509, 725, 817
Hpy8I GTNNAC 2 cut(s) 274, 367
Hpy99I CGWCG 1 cut(s) 830
HpyAV CCTTC 4 cut(s) 130, 144, 308, 787
HpyCH4III ACNGT 5 cut(s) 98, 278, 395, 653, 697
HpyCH4IV ACGT 1 cut(s) 898
HpyCH4V TGCA 4 cut(s) 113, 339, 622, 656
HpyF10VI GCNNNNNNNGC 5 cut(s) 593, 619, 713, 788, 797
HpyF3I CTNAG 4 cut(s) 175, 295, 743, 857
HpySE526I ACGT 1 cut(s) 898
Hsp92II CATG 6 cut(s) 422, 443, 593, 790, 837, 882
HspAI GCGC 1 cut(s) 780
Kzo9I GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
LguI GCTCTTC 1 cut(s) 807
LmnI GCTCC 2 cut(s) 295, 593
Lsp1109I GCAGC 2 cut(s) 700, 794
LweI GCATC 2 cut(s) 100, 609
MaeI CTAG 1 cut(s) 182
MaeII ACGT 1 cut(s) 898
MaeIII GTNAC 1 cut(s) 397
MalI GATC 8 cut(s) 117, 165, 362, 378, 435, 606, 671, 831
MboI GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
MboII GAAGA 4 cut(s) 311, 559, 740, 794
MflI RGATCY 3 cut(s) 115, 433, 669
MhlI GDGCHC 1 cut(s) 598
MlsI TGGCCA 1 cut(s) 569
MluCI AATT 8 cut(s) 208, 247, 492, 542, 563, 623, 657, 867
MluNI TGGCCA 1 cut(s) 569
MlyI GAGTC 1 cut(s) 460
MmeI TCCRAC 1 cut(s) 200
Mox20I TGGCCA 1 cut(s) 569
MroXI GAANNNNTTC 1 cut(s) 551
MscI TGGCCA 1 cut(s) 569
MseI TTAA 4 cut(s) 245, 629, 638, 866
Msp20I TGGCCA 1 cut(s) 569
MspI CCGG 1 cut(s) 102
MspR9I CCNGG 3 cut(s) 171, 358, 926
Mva1269I GAATGC 1 cut(s) 466
MvaI CCWGG 3 cut(s) 171, 358, 926
MvnI CGCG 1 cut(s) 334
MwoI GCNNNNNNNGC 5 cut(s) 593, 619, 713, 788, 797
NcoI CCATGG 2 cut(s) 786, 833
NdeI CATATG 1 cut(s) 709
NdeII GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
NlaIII CATG 6 cut(s) 422, 443, 593, 790, 837, 882
NlaIV GGNNCC 3 cut(s) 280, 291, 892
NmeAIII GCCGAG 1 cut(s) 865
NmuCI GTSAC 1 cut(s) 397
NspV TTCGAA 1 cut(s) 477
PagI TCATGA 1 cut(s) 418
PciSI GCTCTTC 1 cut(s) 807
PctI GAATGC 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 551
PfeI GAWTC 3 cut(s) 267, 682, 773
PfoI TCCNGGA 1 cut(s) 356
PkrI GCNGC 2 cut(s) 715, 784
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
Psp6I CCWGG 3 cut(s) 169, 356, 924
PspGI CCWGG 3 cut(s) 169, 356, 924
PspN4I GGNNCC 3 cut(s) 280, 291, 892
PspPI GGNCC 3 cut(s) 837, 882, 891
PsuI RGATCY 3 cut(s) 115, 433, 669
SapI GCTCTTC 1 cut(s) 807
SaqAI TTAA 4 cut(s) 245, 629, 638, 866
SatI GCNGC 2 cut(s) 714, 783
Sau3AI GATC 8 cut(s) 115, 163, 360, 376, 433, 604, 669, 829
Sau96I GGNCC 3 cut(s) 837, 882, 891
SchI GAGTC 1 cut(s) 460
ScrFI CCNGG 3 cut(s) 171, 358, 926
SduI GDGCHC 1 cut(s) 598
SetI ASST 8 cut(s) 136, 230, 264, 391, 404, 533, 846, 901
SfaNI GCATC 2 cut(s) 100, 609
SfuI TTCGAA 1 cut(s) 477
SinI GGWCC 1 cut(s) 891
SmlI CTYRAG 3 cut(s) 453, 723, 815
SmoI CTYRAG 3 cut(s) 453, 723, 815
Sse9I AATT 8 cut(s) 208, 247, 492, 542, 563, 623, 657, 867
SsiI CCGC 2 cut(s) 36, 66
SspMI CTAG 1 cut(s) 182
StyD4I CCNGG 3 cut(s) 169, 356, 924
StyI CCWWGG 2 cut(s) 786, 833
TaaI ACNGT 5 cut(s) 98, 278, 395, 653, 697
TaiI ACGT 1 cut(s) 901
TaqI TCGA 2 cut(s) 477, 828
TasI AATT 8 cut(s) 208, 247, 492, 542, 563, 623, 657, 867
TfiI GAWTC 3 cut(s) 267, 682, 773
Tru1I TTAA 4 cut(s) 245, 629, 638, 866
Tru9I TTAA 4 cut(s) 245, 629, 638, 866
TscAI CASTG 3 cut(s) 400, 658, 865
TseFI GTSAC 1 cut(s) 397
TseI GCWGC 2 cut(s) 713, 782
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 5 cut(s) 139, 341, 435, 576, 695
TspRI CASTG 3 cut(s) 400, 658, 865
VpaK11BI GGWCC 1 cut(s) 891
XapI RAATTY 1 cut(s) 247
XcmI CCANNNNNNNNNTGG 1 cut(s) 766
XmnI GAANNNNTTC 1 cut(s) 551
XspI CTAG 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.