gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 451 |
| AclWI | GGATC | 2 cut(s) | 309, 380 |
| AcuI | CTGAAG | 1 cut(s) | 293 |
| AfaI | GTAC | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 369 |
| AflIII | ACRYGT | 1 cut(s) | 37 |
| AgsI | TTSAA | 2 cut(s) | 178, 337 |
| AhlI | ACTAGT | 1 cut(s) | 161 |
| AjnI | CCWGG | 1 cut(s) | 294 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 70, 102 |
| AluBI | AGCT | 2 cut(s) | 213, 398 |
| AluI | AGCT | 2 cut(s) | 213, 398 |
| Alw26I | GTCTC | 2 cut(s) | 152, 474 |
| AlwI | GGATC | 2 cut(s) | 309, 380 |
| AsuHPI | GGTGA | 2 cut(s) | 96, 228 |
| BaeGI | GKGCMC | 1 cut(s) | 96 |
| BciT130I | CCWGG | 1 cut(s) | 296 |
| BcoDI | GTCTC | 2 cut(s) | 152, 474 |
| BcuI | ACTAGT | 1 cut(s) | 161 |
| BfaI | CTAG | 2 cut(s) | 162, 216 |
| BfuAI | ACCTGC | 1 cut(s) | 451 |
| BmcAI | AGTACT | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 1 cut(s) | 296 |
| BmiI | GGNNCC | 1 cut(s) | 285 |
| BmrFI | CCNGG | 1 cut(s) | 296 |
| BmsI | GCATC | 1 cut(s) | 352 |
| BsaJI | CCNNGG | 1 cut(s) | 295 |
| BsaWI | WCCGGW | 1 cut(s) | 472 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 369 |
| BseBI | CCWGG | 1 cut(s) | 296 |
| BseDI | CCNNGG | 1 cut(s) | 295 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 369 |
| BseMII | CTCAG | 2 cut(s) | 147, 371 |
| BseSI | GKGCMC | 1 cut(s) | 96 |
| BsiSI | CCGG | 1 cut(s) | 473 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 369 |
| BsmAI | GTCTC | 2 cut(s) | 152, 474 |
| Bsp1286I | GDGCHC | 1 cut(s) | 96 |
| Bsp143I | GATC | 3 cut(s) | 301, 372, 424 |
| BspCNI | CTCAG | 2 cut(s) | 148, 370 |
| BspHI | TCATGA | 1 cut(s) | 406 |
| BspLI | GGNNCC | 1 cut(s) | 285 |
| BspMI | ACCTGC | 1 cut(s) | 451 |
| BspPI | GGATC | 2 cut(s) | 309, 380 |
| BssECI | CCNNGG | 1 cut(s) | 295 |
| BssMI | GATC | 3 cut(s) | 301, 372, 424 |
| Bst2UI | CCWGG | 1 cut(s) | 296 |
| Bst4CI | ACNGT | 2 cut(s) | 22, 247 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 349 |
| BstDEI | CTNAG | 3 cut(s) | 128, 156, 357 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstKTI | GATC | 3 cut(s) | 304, 375, 427 |
| BstMAI | GTCTC | 2 cut(s) | 152, 474 |
| BstMBI | GATC | 3 cut(s) | 301, 372, 424 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 349, 395 |
| BstNI | CCWGG | 1 cut(s) | 296 |
| BstNSI | RCATGY | 2 cut(s) | 41, 149 |
| BstSCI | CCNGG | 1 cut(s) | 294 |
| BstSLI | GKGCMC | 1 cut(s) | 96 |
| BstX2I | RGATCY | 1 cut(s) | 372 |
| BstYI | RGATCY | 1 cut(s) | 372 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| BtsI | GCAGTG | 1 cut(s) | 225 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| BveI | ACCTGC | 1 cut(s) | 451 |
| CciI | TCATGA | 1 cut(s) | 406 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 4 cut(s) | 38, 146, 407, 413 |
| CviJI | RGCY | 2 cut(s) | 213, 398 |
| CviKI_1 | RGCY | 2 cut(s) | 213, 398 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DdeI | CTNAG | 3 cut(s) | 128, 156, 357 |
| DpnI | GATC | 3 cut(s) | 303, 374, 426 |
| DpnII | GATC | 3 cut(s) | 301, 372, 424 |
| Eco57I | CTGAAG | 1 cut(s) | 293 |
| EcoRII | CCWGG | 1 cut(s) | 294 |
| FaeI | CATG | 4 cut(s) | 41, 149, 410, 416 |
| FatI | CATG | 4 cut(s) | 37, 145, 406, 412 |
| FokI | GGATG | 1 cut(s) | 330 |
| FspBI | CTAG | 2 cut(s) | 162, 216 |
| HapII | CCGG | 1 cut(s) | 473 |
| Hin1II | CATG | 4 cut(s) | 41, 149, 410, 416 |
| HincII | GTYRAC | 3 cut(s) | 73, 120, 483 |
| HindII | GTYRAC | 3 cut(s) | 73, 120, 483 |
| HinfI | GANTC | 3 cut(s) | 86, 206, 337 |
| HpaI | GTTAAC | 2 cut(s) | 73, 483 |
| HpaII | CCGG | 1 cut(s) | 473 |
| HphI | GGTGA | 2 cut(s) | 96, 228 |
| Hpy166II | GTNNAC | 4 cut(s) | 6, 73, 120, 483 |
| Hpy188III | TCNNGA | 2 cut(s) | 287, 407 |
| Hpy8I | GTNNAC | 4 cut(s) | 6, 73, 120, 483 |
| HpyCH4III | ACNGT | 2 cut(s) | 22, 247 |
| HpyCH4V | TGCA | 5 cut(s) | 145, 194, 343, 352, 446 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 349, 395 |
| HpyF3I | CTNAG | 3 cut(s) | 128, 156, 357 |
| Hsp92II | CATG | 4 cut(s) | 41, 149, 410, 416 |
| KspAI | GTTAAC | 2 cut(s) | 73, 483 |
| Kzo9I | GATC | 3 cut(s) | 301, 372, 424 |
| LpnPI | CCDG | 7 cut(s) | 223, 281, 296, 300, 308, 456, 486 |
| LweI | GCATC | 1 cut(s) | 352 |
| MaeI | CTAG | 2 cut(s) | 162, 216 |
| MaeIII | GTNAC | 2 cut(s) | 22, 247 |
| MalI | GATC | 3 cut(s) | 303, 374, 426 |
| MboI | GATC | 3 cut(s) | 301, 372, 424 |
| MboII | GAAGA | 2 cut(s) | 213, 450 |
| MflI | RGATCY | 1 cut(s) | 372 |
| MhlI | GDGCHC | 1 cut(s) | 96 |
| MluCI | AATT | 2 cut(s) | 173, 429 |
| MnlI | CCTC | 2 cut(s) | 40, 112 |
| MseI | TTAA | 4 cut(s) | 57, 72, 432, 482 |
| MslI | CAYNNNNRTG | 2 cut(s) | 411, 417 |
| MspI | CCGG | 1 cut(s) | 473 |
| MspR9I | CCNGG | 1 cut(s) | 296 |
| MvaI | CCWGG | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 349, 395 |
| NdeII | GATC | 3 cut(s) | 301, 372, 424 |
| NlaIII | CATG | 4 cut(s) | 41, 149, 410, 416 |
| NlaIV | GGNNCC | 1 cut(s) | 285 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| NspI | RCATGY | 2 cut(s) | 41, 149 |
| PagI | TCATGA | 1 cut(s) | 406 |
| PciI | ACATGT | 1 cut(s) | 37 |
| PfeI | GAWTC | 3 cut(s) | 86, 206, 337 |
| PscI | ACATGT | 1 cut(s) | 37 |
| Psp6I | CCWGG | 1 cut(s) | 294 |
| PspGI | CCWGG | 1 cut(s) | 294 |
| PspN4I | GGNNCC | 1 cut(s) | 285 |
| PsuI | RGATCY | 1 cut(s) | 372 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| RseI | CAYNNNNRTG | 2 cut(s) | 411, 417 |
| SaqAI | TTAA | 4 cut(s) | 57, 72, 432, 482 |
| Sau3AI | GATC | 3 cut(s) | 301, 372, 424 |
| ScaI | AGTACT | 1 cut(s) | 133 |
| ScrFI | CCNGG | 1 cut(s) | 296 |
| SduI | GDGCHC | 1 cut(s) | 96 |
| SetI | ASST | 6 cut(s) | 32, 57, 215, 315, 400, 445 |
| SfaNI | GCATC | 1 cut(s) | 352 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 411, 417 |
| SpeI | ACTAGT | 1 cut(s) | 161 |
| Sse9I | AATT | 2 cut(s) | 173, 429 |
| SspMI | CTAG | 2 cut(s) | 162, 216 |
| StyD4I | CCNGG | 1 cut(s) | 294 |
| TaaI | ACNGT | 2 cut(s) | 22, 247 |
| TaqI | TCGA | 1 cut(s) | 84 |
| TasI | AATT | 2 cut(s) | 173, 429 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TfiI | GAWTC | 3 cut(s) | 86, 206, 337 |
| Tru1I | TTAA | 4 cut(s) | 57, 72, 432, 482 |
| Tru9I | TTAA | 4 cut(s) | 57, 72, 432, 482 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 4 cut(s) | 215, 261, 395, 423 |
| TspRI | CASTG | 1 cut(s) | 232 |
| XceI | RCATGY | 2 cut(s) | 41, 149 |
| XspI | CTAG | 2 cut(s) | 162, 216 |
| ZrmI | AGTACT | 1 cut(s) | 133 |