RchiOBHm_Chr7g0235911

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000106
Physical Location & Seq
Reverse (-)
60822110 .. 60823540
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21141

Sequence Viewer

Length: 1431 bp
ATGGGAGGTGATGACAGTAAAGGTCAGAGTTCCAAGGTCAATCATGTCCAGAAGGTTGTGGTGTCTGTGCGAAGTTCAGATGGAGGTTCTTTTGGGGATTGTGGTAAGATTGGTATGGCTTTAAAGGTTTCTAACTTTGTTGGTTCTGATACATGGATTATTGATTCTGGTGCCTCCGATCATATGACTTATGATAAATCGTATTTTACTGACTTGTCTTCCCCACCAGTGTCCTATGTCACCAATGCCAATGGTGAGGCTTTTCCTGTGTTAGGGTCCGGGTCAGTGCGTATTACTCCCACTTTAGAGCTTCATAATGTGTTATATGTACCTGACTTGTCTCATCACTTGATATCTGTTCCACAGTTGAATACTGAGTCTAAATGCTCCGTAACCTTTTATCCTATGTATGTGATTTTTCAGGATCTTCTCACCAGGGAGAAAGTCGGTCAGGGGTATCTAAGGGGCAGGTTGTTCCATCTGGATCAGACATACGCGGGAGAGAAACCAGGAGCACAGTCCCTGGTCGCTTTGACTTCGAATTCTGATAAGATAAGTGAAATTTGGTTGTGGCATCGCCGTTTAGGGCATCCTCCTTTTAGTCTCATGAAAACAACCATGCCTACTCTGTTTATTGGTGTGAATGAGTCTGCTTTACGCTGTGAAACATGTGTTTTGGCTAAGAGTCATCGTGCTACTTATTCTCCTAGAGTGTCTAATAAAAGTGTTATTCCTTTTGAGTTGATTCATTCTGATGTTTGGGGACCTTCTAGAGAGCCCACTGTATCGGGTATGAGATATTTTGTGTTGTTTATTGATGATTGTACGAGATTGTCATGGGTTGCCCTTCTTAAAACCAAAGATGAAGTCTTTCCAGCTTTCCGAACTTTTCGTACTCTTGTTCAAACACAGTACCATAGCACCATTAAAGTCTTTCGTTCTGACAATGGGGGGAATATGTTAATCATGTTTTCCAAGAGTTTTTTAACACCCATGGGATTGTTCACCAAACCACATGTCCACAAACACCTGAACAAAATGGAGTGTCTGAAAGGAAAAACCGTCATTTACTTGATATGGCTCGTGCCCTTCTCTTTAGTGCCCATATGCCTAAGTATCTTTGGGGTGATGCTGTATATGCTTCCTCCCATCTTATCAATCGTCTTCCCTCTAGTGTCCTTCAGGGAAAAATTCCATTTGAGGTTCTTGCATCTCATGTCTCCTTACCTTCATTTCATAATCTTCCAGCTCGTGTCTTTGGTTGTGTTGCTTTTGTCCATGTTCCTAAGAACCAGAGGTCTAAATTGGATGCCCGGGCACTTAAGTGTGTGTTTGTTGGCTATGGAGGGTATCAGAAAGGGTACAAGTGCTTTCATCCACCTACCAGGAAGTACTATGTCACTATGGATGTTACTTTCTTTGAGGATATGA

Protein Analysis

476

Amino Acids

53.54

Weight (kDa)

9.38

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 52 - 125 5.3e-20 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 174 - 229 1.6e-12 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 459
AccB1I GGYRCC 1 cut(s) 170
AccII CGCG 1 cut(s) 497
AciI CCGC 1 cut(s) 497
AclWI GGATC 2 cut(s) 432, 492
AcsI RAATTY 3 cut(s) 541, 561, 1190
AcuI CTGAAG 1 cut(s) 1165
AfaI GTAC 6 cut(s) 330, 826, 895, 914, 1363, 1393
AfiI CCNNNNNNNGG 1 cut(s) 272
AflII CTTAAG 1 cut(s) 1321
AflIII ACRYGT 2 cut(s) 668, 1015
AgsI TTSAA 2 cut(s) 370, 905
AjnI CCWGG 4 cut(s) 434, 508, 522, 1384
AleI CACNNNNGTG 1 cut(s) 1323
AluBI AGCT 3 cut(s) 310, 878, 1249
AluI AGCT 3 cut(s) 310, 878, 1249
Alw21I GWGCWC 1 cut(s) 517
Alw26I GTCTC 3 cut(s) 345, 608, 1224
AlwI GGATC 2 cut(s) 432, 492
AlwNI CAGNNNCTG 1 cut(s) 523
Ama87I CYCGRG 1 cut(s) 1313
ApoI RAATTY 3 cut(s) 541, 561, 1190
ArsI GACNNNNNNTTYG 4 cut(s) 852, 884, 1002, 1034
Asp700I GAANNNNTTC 1 cut(s) 870
AspS9I GGNCC 2 cut(s) 276, 764
AsuC2I CCSGG 3 cut(s) 280, 1314, 1315
AsuHPI GGTGA 6 cut(s) 20, 232, 266, 424, 997, 1138
AsuII TTCGAA 1 cut(s) 539
AvaI CYCGRG 1 cut(s) 1313
AvaII GGWCC 2 cut(s) 276, 764
BaeGI GKGCMC 3 cut(s) 1089, 1104, 1320
BanI GGYRCC 1 cut(s) 170
BanII GRGCYC 1 cut(s) 780
BauI CACGAG 2 cut(s) 1082, 1250
BbsI GAAGAC 2 cut(s) 210, 1156
Bbv12I GWGCWC 1 cut(s) 517
BccI CCATC 3 cut(s) 74, 486, 1157
BceAI ACGGC 1 cut(s) 564
BciT130I CCWGG 4 cut(s) 436, 510, 524, 1386
BcnI CCSGG 3 cut(s) 280, 1314, 1315
BcoDI GTCTC 3 cut(s) 345, 608, 1224
BfaI CTAG 3 cut(s) 708, 771, 1172
BfrI CTTAAG 1 cut(s) 1321
BfuAI ACCTGC 1 cut(s) 459
BmcAI AGTACT 1 cut(s) 1393
Bme1390I CCNGG 7 cut(s) 280, 436, 510, 524, 1314, 1315, 1386
Bme18I GGWCC 2 cut(s) 276, 764
BmeT110I CYCGRG 1 cut(s) 1313
BmgT120I GGNCC 2 cut(s) 276, 764
BmiI GGNNCC 3 cut(s) 172, 277, 765
BmrFI CCNGG 7 cut(s) 280, 436, 510, 524, 1314, 1315, 1386
BmsI GCATC 5 cut(s) 583, 598, 1119, 1219, 1299
BpiI GAAGAC 2 cut(s) 210, 1156
Bpu14I TTCGAA 1 cut(s) 539
BpuMI CCSGG 3 cut(s) 280, 1314, 1315
BsaJI CCNNGG 5 cut(s) 33, 435, 522, 993, 1313
BsaXI ACNNNNNCTCC 2 cut(s) 688, 718
Bsc4I CCNNNNNNNGG 1 cut(s) 272
Bse1I ACTGG 1 cut(s) 227
BseBI CCWGG 4 cut(s) 436, 510, 524, 1386
BseDI CCNNGG 5 cut(s) 33, 435, 522, 993, 1313
BseGI GGATG 4 cut(s) 589, 1314, 1374, 1413
BseLI CCNNNNNNNGG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 366
BseNI ACTGG 1 cut(s) 227
BseSI GKGCMC 3 cut(s) 1089, 1104, 1320
Bsh1236I CGCG 1 cut(s) 497
BshNI GGYRCC 1 cut(s) 170
BsiHKAI GWGCWC 1 cut(s) 517
BsiHKCI CYCGRG 1 cut(s) 1313
BsiSI CCGG 2 cut(s) 279, 1314
BslFI GGGAC 2 cut(s) 505, 777
BslI CCNNNNNNNGG 1 cut(s) 272
BsmAI GTCTC 3 cut(s) 345, 608, 1224
BsmFI GGGAC 2 cut(s) 505, 777
BsoBI CYCGRG 1 cut(s) 1313
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 5 cut(s) 517, 780, 1089, 1104, 1320
Bsp143I GATC 3 cut(s) 178, 424, 484
Bsp19I CCATGG 1 cut(s) 993
BspACI CCGC 1 cut(s) 497
BspCNI CTCAG 1 cut(s) 367
BspFNI CGCG 1 cut(s) 497
BspHI TCATGA 1 cut(s) 606
BspLI GGNNCC 3 cut(s) 172, 277, 765
BspMI ACCTGC 1 cut(s) 459
BspPI GGATC 2 cut(s) 432, 492
BspT104I TTCGAA 1 cut(s) 539
BspT107I GGYRCC 1 cut(s) 170
BspTI CTTAAG 1 cut(s) 1321
BsrI ACTGG 1 cut(s) 227
BssECI CCNNGG 5 cut(s) 33, 435, 522, 993, 1313
BssMI GATC 3 cut(s) 178, 424, 484
BssSI CACGAG 2 cut(s) 1082, 1250
BssT1I CCWWGG 2 cut(s) 33, 993
Bst2BI CACGAG 2 cut(s) 1082, 1250
Bst2UI CCWGG 4 cut(s) 436, 510, 524, 1386
Bst4CI ACNGT 6 cut(s) 17, 366, 519, 784, 912, 1063
BstAFI CTTAAG 1 cut(s) 1321
BstBI TTCGAA 1 cut(s) 539
BstDEI CTNAG 5 cut(s) 375, 461, 681, 1112, 1286
BstDSI CCRYGG 1 cut(s) 993
BstENI CCTNNNNNAGG 1 cut(s) 270
BstF5I GGATG 4 cut(s) 589, 1314, 1374, 1413
BstFNI CGCG 1 cut(s) 497
BstKTI GATC 3 cut(s) 181, 427, 487
BstMAI GTCTC 3 cut(s) 345, 608, 1224
BstMBI GATC 3 cut(s) 178, 424, 484
BstMWI GCNNNNNNNGC 1 cut(s) 1138
BstNI CCWGG 4 cut(s) 436, 510, 524, 1386
BstNSI RCATGY 2 cut(s) 672, 1019
BstSCI CCNGG 7 cut(s) 278, 434, 508, 522, 1312, 1313, 1384
BstSLI GKGCMC 3 cut(s) 1089, 1104, 1320
BstUI CGCG 1 cut(s) 497
BstV2I GAAGAC 2 cut(s) 210, 1156
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BtgI CCRYGG 1 cut(s) 993
BtgZI GCGATG 1 cut(s) 560
BtsCI GGATG 4 cut(s) 589, 1314, 1374, 1413
BtsIMutI CAGTG 3 cut(s) 234, 291, 780
BveI ACCTGC 1 cut(s) 459
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 606
Cfr13I GGNCC 2 cut(s) 276, 764
Cfr9I CCCGGG 1 cut(s) 1313
Csp6I GTAC 6 cut(s) 329, 825, 894, 913, 1362, 1392
CviJI RGCY 9 cut(s) 119, 260, 310, 680, 778, 878, 1081, 1249, 1340
CviKI_1 RGCY 9 cut(s) 119, 260, 310, 680, 778, 878, 1081, 1249, 1340
CviQI GTAC 6 cut(s) 329, 825, 894, 913, 1362, 1392
DdeI CTNAG 5 cut(s) 375, 461, 681, 1112, 1286
DpnI GATC 3 cut(s) 180, 426, 486
DpnII GATC 3 cut(s) 178, 424, 484
DraI TTTAAA 1 cut(s) 123
Eco130I CCWWGG 2 cut(s) 33, 993
Eco24I GRGCYC 1 cut(s) 780
Eco32I GATATC 1 cut(s) 354
Eco47I GGWCC 2 cut(s) 276, 764
Eco57I CTGAAG 1 cut(s) 1165
Eco88I CYCGRG 1 cut(s) 1313
EcoNI CCTNNNNNAGG 1 cut(s) 270
EcoO109I RGGNCCY 1 cut(s) 764
EcoRI GAATTC 1 cut(s) 541
EcoRII CCWGG 4 cut(s) 434, 508, 522, 1384
EcoRV GATATC 1 cut(s) 354
EcoT14I CCWWGG 2 cut(s) 33, 993
EcoT38I GRGCYC 1 cut(s) 780
ErhI CCWWGG 2 cut(s) 33, 993
FaqI GGGAC 2 cut(s) 505, 777
FauI CCCGC 1 cut(s) 490
FauNDI CATATG 2 cut(s) 183, 1106
FokI GGATG 4 cut(s) 576, 1321, 1361, 1420
FriOI GRGCYC 1 cut(s) 780
FspBI CTAG 3 cut(s) 708, 771, 1172
HapII CCGG 2 cut(s) 279, 1314
HinfI GANTC 5 cut(s) 164, 377, 647, 685, 745
HpaII CCGG 2 cut(s) 279, 1314
HphI GGTGA 6 cut(s) 20, 232, 266, 424, 997, 1138
Hpy166II GTNNAC 2 cut(s) 1005, 1021
Hpy188III TCNNGA 5 cut(s) 49, 422, 482, 607, 771
Hpy8I GTNNAC 2 cut(s) 1005, 1021
HpyAV CCTTC 6 cut(s) 46, 777, 857, 1099, 1189, 1238
HpyCH4III ACNGT 6 cut(s) 17, 366, 519, 784, 912, 1063
HpyCH4V TGCA 1 cut(s) 1210
HpyF10VI GCNNNNNNNGC 1 cut(s) 1138
HpyF3I CTNAG 5 cut(s) 375, 461, 681, 1112, 1286
Kzo9I GATC 3 cut(s) 178, 424, 484
LmnI GCTCC 2 cut(s) 392, 512
LweI GCATC 5 cut(s) 583, 598, 1119, 1219, 1299
MaeI CTAG 3 cut(s) 708, 771, 1172
MaeIII GTNAC 4 cut(s) 238, 391, 1398, 1410
MalI GATC 3 cut(s) 180, 426, 486
MboI GATC 3 cut(s) 178, 424, 484
MboII GAAGA 4 cut(s) 210, 419, 1156, 1234
MflI RGATCY 1 cut(s) 424
MhlI GDGCHC 5 cut(s) 517, 780, 1089, 1104, 1320
MluCI AATT 4 cut(s) 541, 561, 1190, 1303
MlyI GAGTC 3 cut(s) 386, 656, 694
MroXI GAANNNNTTC 1 cut(s) 870
MseI TTAA 6 cut(s) 122, 852, 927, 962, 986, 1322
MslI CAYNNNNRTG 2 cut(s) 753, 1323
MspCI CTTAAG 1 cut(s) 1321
MspI CCGG 2 cut(s) 279, 1314
MspR9I CCNGG 7 cut(s) 280, 436, 510, 524, 1314, 1315, 1386
MvaI CCWGG 4 cut(s) 436, 510, 524, 1386
MvnI CGCG 1 cut(s) 497
MwoI GCNNNNNNNGC 1 cut(s) 1138
NciI CCSGG 3 cut(s) 280, 1314, 1315
NcoI CCATGG 1 cut(s) 993
NdeI CATATG 2 cut(s) 183, 1106
NdeII GATC 3 cut(s) 178, 424, 484
NlaIV GGNNCC 3 cut(s) 172, 277, 765
NmuCI GTSAC 2 cut(s) 238, 1398
NspI RCATGY 2 cut(s) 672, 1019
NspV TTCGAA 1 cut(s) 539
OliI CACNNNNGTG 1 cut(s) 1323
PagI TCATGA 1 cut(s) 606
PciI ACATGT 2 cut(s) 668, 1015
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 2 cut(s) 164, 745
PleI GAGTC 3 cut(s) 385, 655, 693
PpsI GAGTC 3 cut(s) 385, 655, 693
PpuMI RGGWCCY 1 cut(s) 764
PscI ACATGT 2 cut(s) 668, 1015
Psp5II RGGWCCY 1 cut(s) 764
Psp6I CCWGG 4 cut(s) 434, 508, 522, 1384
PspGI CCWGG 4 cut(s) 434, 508, 522, 1384
PspN4I GGNNCC 3 cut(s) 172, 277, 765
PspPI GGNCC 2 cut(s) 276, 764
PspPPI RGGWCCY 1 cut(s) 764
PsrI GAACNNNNNNTAC 2 cut(s) 877, 909
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 1 cut(s) 424
RsaI GTAC 6 cut(s) 330, 826, 895, 914, 1363, 1393
RsaNI GTAC 6 cut(s) 329, 825, 894, 913, 1362, 1392
RseI CAYNNNNRTG 2 cut(s) 753, 1323
SaqAI TTAA 6 cut(s) 122, 852, 927, 962, 986, 1322
Sau3AI GATC 3 cut(s) 178, 424, 484
Sau96I GGNCC 2 cut(s) 276, 764
ScaI AGTACT 1 cut(s) 1393
SchI GAGTC 3 cut(s) 386, 656, 694
ScrFI CCNGG 7 cut(s) 280, 436, 510, 524, 1314, 1315, 1386
SduI GDGCHC 5 cut(s) 517, 780, 1089, 1104, 1320
SfaNI GCATC 5 cut(s) 583, 598, 1119, 1219, 1299
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 2 cut(s) 276, 764
SmaI CCCGGG 1 cut(s) 1315
SmiMI CAYNNNNRTG 2 cut(s) 753, 1323
SmlI CTYRAG 1 cut(s) 1321
SmoI CTYRAG 1 cut(s) 1321
SrfI GCCCGGGC 1 cut(s) 1315
Sse9I AATT 4 cut(s) 541, 561, 1190, 1303
SsiI CCGC 1 cut(s) 497
SspMI CTAG 3 cut(s) 708, 771, 1172
StyD4I CCNGG 7 cut(s) 278, 434, 508, 522, 1312, 1313, 1384
StyI CCWWGG 2 cut(s) 33, 993
TaaI ACNGT 6 cut(s) 17, 366, 519, 784, 912, 1063
TaqI TCGA 1 cut(s) 539
TaqII GACCGA 1 cut(s) 437
TasI AATT 4 cut(s) 541, 561, 1190, 1303
TatI WGTACW 1 cut(s) 1391
TfiI GAWTC 2 cut(s) 164, 745
Tru1I TTAA 6 cut(s) 122, 852, 927, 962, 986, 1322
Tru9I TTAA 6 cut(s) 122, 852, 927, 962, 986, 1322
TscAI CASTG 3 cut(s) 234, 291, 787
TseFI GTSAC 2 cut(s) 238, 1398
Tsp45I GTSAC 2 cut(s) 238, 1398
TspDTI ATGAA 7 cut(s) 302, 623, 737, 879, 1220, 1225, 1363
TspGWI ACGGA 1 cut(s) 379
TspMI CCCGGG 1 cut(s) 1313
TspRI CASTG 3 cut(s) 234, 291, 787
Vha464I CTTAAG 1 cut(s) 1321
VpaK11BI GGWCC 2 cut(s) 276, 764
XagI CCTNNNNNAGG 1 cut(s) 270
XapI RAATTY 3 cut(s) 541, 561, 1190
XbaI TCTAGA 1 cut(s) 770
XceI RCATGY 2 cut(s) 672, 1019
XmaI CCCGGG 1 cut(s) 1313
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 3 cut(s) 708, 771, 1172
ZrmI AGTACT 1 cut(s) 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.