RchiOBHm_Chr1g0357701

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000106
Physical Location & Seq
Forward (+)
50025878 .. 50027320
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58292

Sequence Viewer

Length: 1443 bp
ATGGCTTTAAAGGTTTCTCACTTTGTTGGTTCTGATACATGGATTATTGATTCTGGTGCCTCTGACCATATGACTTATGATAAATCATTTTTTACTGAGTTGTCTCCCCCACCAGTGTCCTATGTCACCAATGCCAATGGTGAGGCTTTTCCTGTGTTAGGGTCAGGGTCCGTGCGTATTACTCCCACTTTAGAACTTCATAATGTGTTATATGTGCCTGACTTGTCTCATCACTTGATATCTGTTCCACAGTTGAATACTGAGTCTAAATGCTCCGTAACCTTTTATCCTATGTACGTGATGTTTCAGGATCTTCTCACCAGGGAGTTAATCGGTCGGGGGTATCTGAGGGGCAGATTGTTCCATCTGGATCAGACATACGCAGGGGAGAAACCAGGAGCACCGTCTCGCGCCGCTTTGACTTTGAATTCTGATAAGCTAAGTGAGGTTTGGTTGTGGCATCGCCGTTTAGGGCATCCATCTTTTAGTCTTATGAGAAAAACCATGCCTACTCTGTTTATTGGTGTGGATGAGTCTGTTCTACATTGTGAAACATGTGTCTTGGCCAAAAGTCATCGTGCTACTTATTCTCCTAGTATTTCTAATAAAAGTGTTATTCCTTTTGAGTTGATTCATTCTGATGTTTGGGGACCTTCTAGAGAACCCACTGTGTCCGGTATGAGGTATTTTGTGTTGTTTATTGATGATTGTACGAGATTGACATGGGTTACTCTTCTTAAAACCAAAGATGAAGTCTTTCCAGCTTTTCAAACTTTTCGTACTCTTGTTCAAACACAATATCATAGCACCATTAAAGTCCTTCGTTCTGACAATGGGGGAGAATATGTTAATCATGTTTTCCAAGAGTTTTTCAAAGCCCATGGGATTGTTCACCAAACCACATGTCCACAAACACCAGAGCAAAATGGTGTGTCTGAAAGGAAAAACCGTCATTTACTTGATATGGCTCGTGCCCTTCTCTTTAGTGCTCATATGCCTAAGTATCTTTGGGGCGATGCTATTCTTGCTTCTTCCCATCTTATCAATCGTCTTCCATCTAGTGTCCTTCATGGAAAAATTCCATTTGCGGTTCTTGCCTCTCATGTTTCCTTATCTTCATTTCATAACCTGCCAGCTCGTGTCTTTGGTTGTGTTGTTTTTGTCCATATTCCTAAAAATCAGCGGTCTAAGTTGGATGCCCGAGCGCTTAAGTGTGTGTTTGTGGGCTACGGAGGTTATCAGAAAGGGTACAAGTGCTATCATCCACCAACTAGAAAGTACTATGTCACTATGGATGTTACTTTCTTTGAGGACATGAGTTATTTTTCCTCCTCAGATACCGCTCTTCAGGGGGAGAATTCATTTTTTGAAGAGCTATATCATGGAGAGGGGAGGAGGAATCAGAAAGCGAAGGAGAAGTCGCACAGACAGGAGATATTTTGA

Protein Analysis

480

Amino Acids

54.53

Weight (kDa)

8.83

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 14 - 87 5.6e-20 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 141 - 191 3.7e-14 GAG-pre-integrase domain
rve PF00665 207 - 306 9.4e-12 Integrase core domain
SH3_retrovirus PF25597 384 - 445 6.1e-24 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1137
AccB1I GGYRCC 1 cut(s) 56
AccBSI CCGCTC 1 cut(s) 1343
AccII CGCG 1 cut(s) 411
AciI CCGC 4 cut(s) 414, 1088, 1183, 1341
AclWI GGATC 2 cut(s) 318, 378
AcoI YGGCCR 1 cut(s) 564
AcsI RAATTY 3 cut(s) 427, 1077, 1357
AcuI CTGAAG 1 cut(s) 1331
AfaI GTAC 5 cut(s) 296, 712, 781, 1250, 1280
AfeI AGCGCT 1 cut(s) 1206
AfiI CCNNNNNNNGG 2 cut(s) 158, 681
AflII CTTAAG 1 cut(s) 1208
AflIII ACRYGT 2 cut(s) 554, 902
AgsI TTSAA 6 cut(s) 256, 427, 770, 791, 874, 1370
AjnI CCWGG 2 cut(s) 320, 394
AluBI AGCT 4 cut(s) 439, 764, 1136, 1375
AluI AGCT 4 cut(s) 439, 764, 1136, 1375
Alw21I GWGCWC 2 cut(s) 403, 991
Alw26I GTCTC 3 cut(s) 108, 231, 411
AlwI GGATC 2 cut(s) 318, 378
Ama87I CYCGRG 1 cut(s) 1200
Aor51HI AGCGCT 1 cut(s) 1206
AoxI GGCC 1 cut(s) 564
ApoI RAATTY 3 cut(s) 427, 1077, 1357
ArsI GACNNNNNNTTYG 6 cut(s) 738, 770, 889, 921, 1403, 1435
Asp700I GAANNNNTTC 1 cut(s) 756
AspLEI GCGC 2 cut(s) 413, 1207
AspS9I GGNCC 2 cut(s) 168, 650
AsuHPI GGTGA 4 cut(s) 118, 152, 310, 884
AvaI CYCGRG 1 cut(s) 1200
AvaII GGWCC 2 cut(s) 168, 650
BaeGI GKGCMC 1 cut(s) 976
BalI TGGCCA 1 cut(s) 566
BanI GGYRCC 1 cut(s) 56
BauI CACGAG 2 cut(s) 969, 1137
BbsI GAAGAC 1 cut(s) 1043
Bbv12I GWGCWC 2 cut(s) 403, 991
BccI CCATC 4 cut(s) 372, 487, 1044, 1063
BceAI ACGGC 1 cut(s) 450
BciT130I CCWGG 2 cut(s) 322, 396
BcoDI GTCTC 3 cut(s) 108, 231, 411
BfaI CTAG 4 cut(s) 594, 657, 1059, 1272
BfoI RGCGCY 1 cut(s) 1208
BfrI CTTAAG 1 cut(s) 1208
BfuAI ACCTGC 1 cut(s) 1137
BisI GCNGC 1 cut(s) 414
BlsI GCNGC 1 cut(s) 415
BmcAI AGTACT 1 cut(s) 1280
Bme1390I CCNGG 2 cut(s) 322, 396
Bme18I GGWCC 2 cut(s) 168, 650
BmeT110I CYCGRG 1 cut(s) 1200
BmgT120I GGNCC 2 cut(s) 168, 650
BmiI GGNNCC 3 cut(s) 58, 169, 651
BmrFI CCNGG 2 cut(s) 322, 396
BmsI GCATC 4 cut(s) 469, 484, 1006, 1186
BpiI GAAGAC 1 cut(s) 1043
BsaAI YACGTR 1 cut(s) 298
BsaJI CCNNGG 2 cut(s) 321, 880
BsaWI WCCGGW 1 cut(s) 674
BsaXI ACNNNNNCTCC 4 cut(s) 574, 604, 831, 861
Bsc4I CCNNNNNNNGG 2 cut(s) 158, 681
Bse1I ACTGG 1 cut(s) 113
BseBI CCWGG 2 cut(s) 322, 396
BseDI CCNNGG 2 cut(s) 321, 880
BseGI GGATG 5 cut(s) 475, 535, 1201, 1261, 1300
BseLI CCNNNNNNNGG 2 cut(s) 158, 681
BseMII CTCAG 4 cut(s) 87, 252, 338, 1347
BseNI ACTGG 1 cut(s) 113
BseRI GAGGAG 2 cut(s) 1321, 1408
BseSI GKGCMC 1 cut(s) 976
Bsh1236I CGCG 1 cut(s) 411
Bsh1285I CGRYCG 1 cut(s) 337
BshFI GGCC 1 cut(s) 566
BshNI GGYRCC 1 cut(s) 56
BsiEI CGRYCG 1 cut(s) 337
BsiHKAI GWGCWC 2 cut(s) 403, 991
BsiHKCI CYCGRG 1 cut(s) 1200
BsiSI CCGG 1 cut(s) 675
BslFI GGGAC 1 cut(s) 663
BslI CCNNNNNNNGG 2 cut(s) 158, 681
BsmAI GTCTC 3 cut(s) 108, 231, 411
BsmBI CGTCTC 1 cut(s) 411
BsmFI GGGAC 1 cut(s) 663
BsnI GGCC 1 cut(s) 566
BsoBI CYCGRG 1 cut(s) 1200
Bsp1286I GDGCHC 3 cut(s) 403, 976, 991
Bsp143I GATC 2 cut(s) 310, 370
Bsp19I CCATGG 1 cut(s) 880
BspACI CCGC 4 cut(s) 414, 1088, 1183, 1341
BspANI GGCC 1 cut(s) 566
BspCNI CTCAG 4 cut(s) 88, 253, 339, 1346
BspFNI CGCG 1 cut(s) 411
BspLI GGNNCC 3 cut(s) 58, 169, 651
BspMI ACCTGC 1 cut(s) 1137
BspPI GGATC 2 cut(s) 318, 378
BspQI GCTCTTC 2 cut(s) 1350, 1365
BspT107I GGYRCC 1 cut(s) 56
BspTI CTTAAG 1 cut(s) 1208
BsrBI CCGCTC 1 cut(s) 1343
BsrI ACTGG 1 cut(s) 113
BssECI CCNNGG 2 cut(s) 321, 880
BssMI GATC 2 cut(s) 310, 370
BssSI CACGAG 2 cut(s) 969, 1137
BssT1I CCWWGG 1 cut(s) 880
Bst2BI CACGAG 2 cut(s) 969, 1137
Bst2UI CCWGG 2 cut(s) 322, 396
Bst4CI ACNGT 4 cut(s) 252, 405, 670, 950
Bst6I CTCTTC 3 cut(s) 738, 1350, 1365
BstAFI CTTAAG 1 cut(s) 1208
BstBAI YACGTR 1 cut(s) 298
BstC8I GCNNGC 1 cut(s) 1134
BstDEI CTNAG 7 cut(s) 96, 261, 347, 440, 999, 1188, 1333
BstDSI CCRYGG 1 cut(s) 880
BstENI CCTNNNNNAGG 1 cut(s) 156
BstF5I GGATG 5 cut(s) 475, 535, 1201, 1261, 1300
BstFNI CGCG 1 cut(s) 411
BstH2I RGCGCY 1 cut(s) 1208
BstHHI GCGC 2 cut(s) 413, 1207
BstKTI GATC 2 cut(s) 313, 373
BstMAI GTCTC 3 cut(s) 108, 231, 411
BstMBI GATC 2 cut(s) 310, 370
BstMCI CGRYCG 1 cut(s) 337
BstMWI GCNNNNNNNGC 2 cut(s) 1025, 1094
BstNI CCWGG 2 cut(s) 322, 396
BstNSI RCATGY 2 cut(s) 558, 906
BstSCI CCNGG 2 cut(s) 320, 394
BstSLI GKGCMC 1 cut(s) 976
BstUI CGCG 1 cut(s) 411
BstV2I GAAGAC 1 cut(s) 1043
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
BsuRI GGCC 1 cut(s) 566
BtgI CCRYGG 1 cut(s) 880
BtgZI GCGATG 2 cut(s) 446, 1029
BtsCI GGATG 5 cut(s) 475, 535, 1201, 1261, 1300
BtsIMutI CAGTG 2 cut(s) 120, 666
BveI ACCTGC 1 cut(s) 1137
Cac8I GCNNGC 1 cut(s) 1134
CfoI GCGC 2 cut(s) 413, 1207
Cfr13I GGNCC 2 cut(s) 168, 650
Csp6I GTAC 5 cut(s) 295, 711, 780, 1249, 1279
CviQI GTAC 5 cut(s) 295, 711, 780, 1249, 1279
DdeI CTNAG 7 cut(s) 96, 261, 347, 440, 999, 1188, 1333
DpnI GATC 2 cut(s) 312, 372
DpnII GATC 2 cut(s) 310, 370
DraI TTTAAA 1 cut(s) 9
EaeI YGGCCR 1 cut(s) 564
Eam1104I CTCTTC 3 cut(s) 738, 1350, 1365
EarI CTCTTC 3 cut(s) 738, 1350, 1365
Eco130I CCWWGG 1 cut(s) 880
Eco32I GATATC 1 cut(s) 240
Eco47I GGWCC 2 cut(s) 168, 650
Eco47III AGCGCT 1 cut(s) 1206
Eco57I CTGAAG 1 cut(s) 1331
Eco88I CYCGRG 1 cut(s) 1200
EcoNI CCTNNNNNAGG 1 cut(s) 156
EcoO109I RGGNCCY 1 cut(s) 650
EcoRI GAATTC 2 cut(s) 427, 1357
EcoRII CCWGG 2 cut(s) 320, 394
EcoRV GATATC 1 cut(s) 240
EcoT14I CCWWGG 1 cut(s) 880
ErhI CCWWGG 1 cut(s) 880
Esp3I CGTCTC 1 cut(s) 411
FaqI GGGAC 1 cut(s) 663
FauNDI CATATG 2 cut(s) 69, 993
Fnu4HI GCNGC 1 cut(s) 414
FokI GGATG 5 cut(s) 462, 542, 1208, 1248, 1307
Fsp4HI GCNGC 1 cut(s) 414
FspBI CTAG 4 cut(s) 594, 657, 1059, 1272
GlaI GCGC 2 cut(s) 412, 1206
GluI GCNGC 1 cut(s) 414
HaeII RGCGCY 1 cut(s) 1208
HaeIII GGCC 1 cut(s) 566
HapII CCGG 1 cut(s) 675
HhaI GCGC 2 cut(s) 413, 1207
Hin6I GCGC 2 cut(s) 411, 1205
HinP1I GCGC 2 cut(s) 411, 1205
HinfI GANTC 5 cut(s) 50, 263, 533, 631, 1399
HpaII CCGG 1 cut(s) 675
HphI GGTGA 4 cut(s) 118, 152, 310, 884
Hpy166II GTNNAC 2 cut(s) 892, 908
Hpy188III TCNNGA 3 cut(s) 308, 368, 657
Hpy8I GTNNAC 2 cut(s) 892, 908
HpyAV CCTTC 5 cut(s) 663, 830, 986, 1076, 1405
HpyCH4III ACNGT 4 cut(s) 252, 405, 670, 950
HpyCH4IV ACGT 1 cut(s) 297
HpyF10VI GCNNNNNNNGC 2 cut(s) 1025, 1094
HpyF3I CTNAG 7 cut(s) 96, 261, 347, 440, 999, 1188, 1333
HpySE526I ACGT 1 cut(s) 297
HspAI GCGC 2 cut(s) 411, 1205
Kzo9I GATC 2 cut(s) 310, 370
LguI GCTCTTC 2 cut(s) 1350, 1365
LmnI GCTCC 2 cut(s) 278, 398
LweI GCATC 4 cut(s) 469, 484, 1006, 1186
MaeI CTAG 4 cut(s) 594, 657, 1059, 1272
MaeII ACGT 1 cut(s) 297
MaeIII GTNAC 5 cut(s) 124, 277, 727, 1285, 1297
MalI GATC 2 cut(s) 312, 372
MbiI CCGCTC 1 cut(s) 1343
MboI GATC 2 cut(s) 310, 370
MboII GAAGA 7 cut(s) 305, 725, 1023, 1043, 1107, 1337, 1382
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 3 cut(s) 403, 976, 991
MlsI TGGCCA 1 cut(s) 566
MluCI AATT 3 cut(s) 427, 1077, 1357
MluNI TGGCCA 1 cut(s) 566
MlyI GAGTC 2 cut(s) 272, 542
MmeI TCCRAC 1 cut(s) 1173
Mox20I TGGCCA 1 cut(s) 566
MroXI GAANNNNTTC 1 cut(s) 756
MscI TGGCCA 1 cut(s) 566
MseI TTAA 6 cut(s) 8, 329, 738, 813, 849, 1209
MslI CAYNNNNRTG 1 cut(s) 639
Msp20I TGGCCA 1 cut(s) 566
MspA1I CMGCKG 1 cut(s) 1183
MspCI CTTAAG 1 cut(s) 1208
MspI CCGG 1 cut(s) 675
MspR9I CCNGG 2 cut(s) 322, 396
MvaI CCWGG 2 cut(s) 322, 396
MvnI CGCG 1 cut(s) 411
MwoI GCNNNNNNNGC 2 cut(s) 1025, 1094
NcoI CCATGG 1 cut(s) 880
NdeI CATATG 2 cut(s) 69, 993
NdeII GATC 2 cut(s) 310, 370
NlaIV GGNNCC 3 cut(s) 58, 169, 651
NmuCI GTSAC 2 cut(s) 124, 1285
NspI RCATGY 2 cut(s) 558, 906
PciI ACATGT 2 cut(s) 554, 902
PciSI GCTCTTC 2 cut(s) 1350, 1365
PdmI GAANNNNTTC 1 cut(s) 756
PfeI GAWTC 3 cut(s) 50, 631, 1399
PkrI GCNGC 1 cut(s) 415
PleI GAGTC 2 cut(s) 271, 541
PpsI GAGTC 2 cut(s) 271, 541
Ppu21I YACGTR 1 cut(s) 298
PpuMI RGGWCCY 1 cut(s) 650
PscI ACATGT 2 cut(s) 554, 902
Psp5II RGGWCCY 1 cut(s) 650
Psp6I CCWGG 2 cut(s) 320, 394
PspGI CCWGG 2 cut(s) 320, 394
PspN4I GGNNCC 3 cut(s) 58, 169, 651
PspPI GGNCC 2 cut(s) 168, 650
PspPPI RGGWCCY 1 cut(s) 650
PsuI RGATCY 1 cut(s) 310
RsaI GTAC 5 cut(s) 296, 712, 781, 1250, 1280
RsaNI GTAC 5 cut(s) 295, 711, 780, 1249, 1279
RseI CAYNNNNRTG 1 cut(s) 639
SapI GCTCTTC 2 cut(s) 1350, 1365
SaqAI TTAA 6 cut(s) 8, 329, 738, 813, 849, 1209
SatI GCNGC 1 cut(s) 414
Sau3AI GATC 2 cut(s) 310, 370
Sau96I GGNCC 2 cut(s) 168, 650
ScaI AGTACT 1 cut(s) 1280
SchI GAGTC 2 cut(s) 272, 542
ScrFI CCNGG 2 cut(s) 322, 396
SduI GDGCHC 3 cut(s) 403, 976, 991
SfaNI GCATC 4 cut(s) 469, 484, 1006, 1186
SinI GGWCC 2 cut(s) 168, 650
SmiMI CAYNNNNRTG 1 cut(s) 639
SmlI CTYRAG 1 cut(s) 1208
SmoI CTYRAG 1 cut(s) 1208
Sse9I AATT 3 cut(s) 427, 1077, 1357
SsiI CCGC 4 cut(s) 414, 1088, 1183, 1341
SspMI CTAG 4 cut(s) 594, 657, 1059, 1272
StyD4I CCNGG 2 cut(s) 320, 394
StyI CCWWGG 1 cut(s) 880
TaaI ACNGT 4 cut(s) 252, 405, 670, 950
TaiI ACGT 1 cut(s) 300
TaqII GACCGA 1 cut(s) 323
TasI AATT 3 cut(s) 427, 1077, 1357
TatI WGTACW 1 cut(s) 1278
TauI GCSGC 1 cut(s) 416
TfiI GAWTC 3 cut(s) 50, 631, 1399
Tru1I TTAA 6 cut(s) 8, 329, 738, 813, 849, 1209
Tru9I TTAA 6 cut(s) 8, 329, 738, 813, 849, 1209
TscAI CASTG 2 cut(s) 120, 673
TseFI GTSAC 2 cut(s) 124, 1285
Tsp45I GTSAC 2 cut(s) 124, 1285
TspDTI ATGAA 7 cut(s) 188, 623, 765, 1058, 1107, 1112, 1350
TspGWI ACGGA 3 cut(s) 160, 265, 1245
TspRI CASTG 2 cut(s) 120, 673
Vha464I CTTAAG 1 cut(s) 1208
VpaK11BI GGWCC 2 cut(s) 168, 650
XagI CCTNNNNNAGG 1 cut(s) 156
XapI RAATTY 3 cut(s) 427, 1077, 1357
XbaI TCTAGA 1 cut(s) 656
XceI RCATGY 2 cut(s) 558, 906
XmnI GAANNNNTTC 1 cut(s) 756
XspI CTAG 4 cut(s) 594, 657, 1059, 1272
ZrmI AGTACT 1 cut(s) 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.