Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 248, 313 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AgeI | ACCGGT | 1 cut(s) | 25 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 64 |
| AluBI | AGCT | 2 cut(s) | 103, 158 |
| AluI | AGCT | 2 cut(s) | 103, 158 |
| Alw26I | GTCTC | 2 cut(s) | 197, 308 |
| AlwI | GGATC | 2 cut(s) | 248, 313 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AsiGI | ACCGGT | 1 cut(s) | 25 |
| AspLEI | GCGC | 1 cut(s) | 234 |
| BccI | CCATC | 4 cut(s) | 70, 116, 302, 314 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 12, 46 |
| BcoDI | GTCTC | 2 cut(s) | 197, 308 |
| BfmI | CTRYAG | 1 cut(s) | 135 |
| BfoI | RGCGCY | 1 cut(s) | 235 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 64 |
| BsaWI | WCCGGW | 1 cut(s) | 25 |
| Bse118I | RCCGGY | 1 cut(s) | 25 |
| BseGI | GGATG | 1 cut(s) | 294 |
| Bsh1285I | CGRYCG | 1 cut(s) | 95 |
| BshTI | ACCGGT | 1 cut(s) | 25 |
| BsiEI | CGRYCG | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslFI | GGGAC | 1 cut(s) | 365 |
| BsmAI | GTCTC | 2 cut(s) | 197, 308 |
| BsmBI | CGTCTC | 1 cut(s) | 308 |
| BsmFI | GGGAC | 1 cut(s) | 365 |
| Bsp143I | GATC | 3 cut(s) | 92, 240, 318 |
| BspMAI | CTGCAG | 1 cut(s) | 139 |
| BspPI | GGATC | 2 cut(s) | 248, 313 |
| BsrFI | RCCGGY | 1 cut(s) | 25 |
| BssAI | RCCGGY | 1 cut(s) | 25 |
| BssMI | GATC | 3 cut(s) | 92, 240, 318 |
| Bst4CI | ACNGT | 1 cut(s) | 175 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstF5I | GGATG | 1 cut(s) | 294 |
| BstH2I | RGCGCY | 1 cut(s) | 235 |
| BstHHI | GCGC | 1 cut(s) | 234 |
| BstKTI | GATC | 3 cut(s) | 95, 243, 321 |
| BstMAI | GTCTC | 2 cut(s) | 197, 308 |
| BstMBI | GATC | 3 cut(s) | 92, 240, 318 |
| BstMCI | CGRYCG | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 1 cut(s) | 135 |
| BtsCI | GGATG | 1 cut(s) | 294 |
| BtsI | GCAGTG | 1 cut(s) | 144 |
| BtsIMutI | CAGTG | 1 cut(s) | 144 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| CfoI | GCGC | 1 cut(s) | 234 |
| Cfr10I | RCCGGY | 1 cut(s) | 25 |
| CspAI | ACCGGT | 1 cut(s) | 25 |
| CviAII | CATG | 1 cut(s) | 310 |
| CviJI | RGCY | 3 cut(s) | 103, 158, 293 |
| CviKI_1 | RGCY | 3 cut(s) | 103, 158, 293 |
| DpnI | GATC | 3 cut(s) | 94, 242, 320 |
| DpnII | GATC | 3 cut(s) | 92, 240, 318 |
| DriI | GACNNNNNGTC | 1 cut(s) | 64 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 64 |
| Esp3I | CGTCTC | 1 cut(s) | 308 |
| FaeI | CATG | 1 cut(s) | 313 |
| FaiI | YATR | 5 cut(s) | 21, 57, 89, 311, 359 |
| FaqI | GGGAC | 1 cut(s) | 365 |
| FatI | CATG | 1 cut(s) | 309 |
| FokI | GGATG | 1 cut(s) | 281 |
| GlaI | GCGC | 1 cut(s) | 233 |
| HaeII | RGCGCY | 1 cut(s) | 235 |
| HapII | CCGG | 1 cut(s) | 26 |
| HhaI | GCGC | 1 cut(s) | 234 |
| Hin1II | CATG | 1 cut(s) | 313 |
| Hin6I | GCGC | 1 cut(s) | 232 |
| HinP1I | GCGC | 1 cut(s) | 232 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 4 cut(s) | 34, 109, 148, 353 |
| HpaII | CCGG | 1 cut(s) | 26 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 2 cut(s) | 169, 374 |
| HpyAV | CCTTC | 2 cut(s) | 5, 175 |
| HpyCH4III | ACNGT | 1 cut(s) | 175 |
| HpyCH4V | TGCA | 3 cut(s) | 23, 137, 142 |
| Hsp92II | CATG | 1 cut(s) | 313 |
| HspAI | GCGC | 1 cut(s) | 232 |
| Kzo9I | GATC | 3 cut(s) | 92, 240, 318 |
| LpnPI | CCDG | 2 cut(s) | 34, 39 |
| MaeIII | GTNAC | 1 cut(s) | 145 |
| MalI | GATC | 3 cut(s) | 94, 242, 320 |
| MboI | GATC | 3 cut(s) | 92, 240, 318 |
| MboII | GAAGA | 2 cut(s) | 131, 269 |
| MluCI | AATT | 3 cut(s) | 82, 198, 277 |
| MlyI | GAGTC | 2 cut(s) | 142, 347 |
| MmeI | TCCRAC | 1 cut(s) | 155 |
| MnlI | CCTC | 4 cut(s) | 90, 275, 332, 373 |
| MspI | CCGG | 1 cut(s) | 26 |
| NdeII | GATC | 3 cut(s) | 92, 240, 318 |
| NlaIII | CATG | 1 cut(s) | 313 |
| NmuCI | GTSAC | 1 cut(s) | 145 |
| PfeI | GAWTC | 2 cut(s) | 34, 109 |
| PinAI | ACCGGT | 1 cut(s) | 25 |
| Ple19I | CGATCG | 1 cut(s) | 95 |
| PleI | GAGTC | 2 cut(s) | 142, 347 |
| PpsI | GAGTC | 2 cut(s) | 142, 347 |
| PstI | CTGCAG | 1 cut(s) | 139 |
| PvuI | CGATCG | 1 cut(s) | 95 |
| Sau3AI | GATC | 3 cut(s) | 92, 240, 318 |
| SchI | GAGTC | 2 cut(s) | 142, 347 |
| SetI | ASST | 5 cut(s) | 53, 105, 160, 167, 267 |
| SfcI | CTRYAG | 1 cut(s) | 135 |
| SgrAI | CRCCGGYG | 1 cut(s) | 25 |
| Sse9I | AATT | 3 cut(s) | 82, 198, 277 |
| TaaI | ACNGT | 1 cut(s) | 175 |
| TaqI | TCGA | 6 cut(s) | 32, 45, 95, 170, 243, 324 |
| TasI | AATT | 3 cut(s) | 82, 198, 277 |
| TfiI | GAWTC | 2 cut(s) | 34, 109 |
| TscAI | CASTG | 1 cut(s) | 144 |
| TseFI | GTSAC | 1 cut(s) | 145 |
| Tsp45I | GTSAC | 1 cut(s) | 145 |
| TspDTI | ATGAA | 3 cut(s) | 76, 266, 374 |
| TspRI | CASTG | 1 cut(s) | 144 |
| XapI | RAATTY | 1 cut(s) | 82 |