Rw4G031400

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000106
Physical Location & Seq
Reverse (-)
58397926 .. 58399487
1562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G031400.1

Sequence Viewer

Length: 1251 bp
ATGGCAGGAGACGGAGAGAAGGTTATCGTTGAAAAACCTCTCGAACAACAGACCTCCAAGAATGCTGCTCCATGGGAGAATCCTAATCACCCGCTGTTCCTTCACCATTCAGACCAGCCAGGCGCTATGCTCGTTGCGCAGGCCTTGGTGGAAGATAACTATACTACATGGGAACAATCGATGCTTATGGCACTAACCATCAAGAATAAGAAGGGCTTCGTCGATGGAACTCTGGCGAAACCAACTCACAATCCTTCCGAGCAACTCCAGTGGGAGAGATGCAATACTCTGGTGAAAACATGGCTGCTAGGGGCCATGTCGAAAGATATATCCAACAGTGTGATACACTGTAAAGATGCACGAAGCATGTGGCTGGAATTGAAGGAGAGGTTCTCTCAGGTGAACACAGTTGCCTTATTTCAAATTGAAAGTGCTATTCATGGTTGTGAACAAGGAGGTACGTCTGTTACTTCCTTCTTTACCAAACTGAAGGCTTTATGGGATGAGAAGGACTCCCTCTGCTCTTTTCCTCCTTGTAGTTGTGATGCTGCTCCAGAAGTCAAATCCTTCATGGAAACTCAGAAGACAATGAAATTTTTGATGGGACTGAATGAAGGATTCGCACAGACTAGAAGCAACATCATTAGCCTTGATCCTCTACCACCACTGAACAAGGCATATGCCATGGTGCTTCGTCAAGAGAAACAAGCAGCAGCAATTGCAAGCAAGAGTGGATCAGTGACAGAGGTCTCGGCCTTCGCAGTCAAGAGGCCAGAGAAATATGAACAACGAGAAAAGCATGCTCCATCTTTTCCCCGTGATACACAATTCACAGGAGGAGAAAATAAATATTGTGAAAAGTGTAATATGACAAACCATTACACAAAGCATTGTAGAGCACATCTTAAGTGCACCTACTGTGAGGGCAATGGTCACACTTATAACTATTGCAGAAGAAGAAAGAAATTGATGGGAGAAGGGTACAACAATCCAAAGGCCAACCATGTTAGTGCCACCAGTGAAAGAAAAGAGGATGATGCGAGTTTTCCACTCTCCCAGACAGAGTGTACCCAAATGCTGGGGCTGCTAAGTCGTCTTCAAGCAACAGGGAATAAACCAAAGAATGAGGGTCAATTGCTGGAAATGCTGAACATCAACAAACCATCCACGACCAACTTTGTGGGTAATGTACCAAACCTTGATGATACCTCAGGACCTGCGTTCGGGGAAGATGATTGGGACGGGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2

Protein Analysis

416

Amino Acids

46.5

Weight (kDa)

6.86

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 35 - 82 5e-18 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 942
Acc16I TGCGCA 1 cut(s) 138
Acc36I ACCTGC 1 cut(s) 1225
AccB7I CCANNNNNTGG 1 cut(s) 1078
AciI CCGC 1 cut(s) 92
AclWI GGATC 2 cut(s) 647, 742
AcsI RAATTY 1 cut(s) 593
AcuI CTGAAG 1 cut(s) 509
AfaI GTAC 4 cut(s) 460, 983, 1069, 1191
AfiI CCNNNNNNNGG 2 cut(s) 1078, 1223
AflII CTTAAG 1 cut(s) 905
AgsI TTSAA 5 cut(s) 32, 382, 422, 428, 1100
AjnI CCWGG 1 cut(s) 118
AluBI AGCT 1 cut(s) 1248
AluI AGCT 1 cut(s) 1248
Alw21I GWGCWC 2 cut(s) 901, 914
Alw26I GTCTC 2 cut(s) 3, 754
Alw44I GTGCAC 1 cut(s) 910
AlwI GGATC 2 cut(s) 647, 742
AlwNI CAGNNNCTG 1 cut(s) 1217
AoxI GGCC 5 cut(s) 141, 312, 753, 770, 996
ApaLI GTGCAC 1 cut(s) 910
ApeKI GCWGC 6 cut(s) 65, 304, 548, 710, 713, 1084
ApoI RAATTY 1 cut(s) 593
Asp700I GAANNNNTTC 1 cut(s) 215
AspLEI GCGC 2 cut(s) 125, 139
AspS9I GGNCC 2 cut(s) 312, 1214
AsuHPI GGTGA 4 cut(s) 80, 95, 304, 412
AvaII GGWCC 1 cut(s) 1214
AxyI CCTNAGG 1 cut(s) 1210
BaeGI GKGCMC 1 cut(s) 914
BaeI ACNNNNGTAYC 2 cut(s) 450, 483
BbsI GAAGAC 2 cut(s) 590, 1088
Bbv12I GWGCWC 2 cut(s) 901, 914
BbvI GCAGC 6 cut(s) 52, 291, 535, 722, 725, 1071
BccI CCATC 6 cut(s) 206, 218, 595, 814, 964, 1171
BciT130I CCWGG 1 cut(s) 120
BcoDI GTCTC 2 cut(s) 3, 754
BfaI CTAG 2 cut(s) 308, 630
BfoI RGCGCY 1 cut(s) 126
BfrI CTTAAG 1 cut(s) 905
BfuAI ACCTGC 1 cut(s) 1225
BisI GCNGC 6 cut(s) 66, 305, 549, 711, 714, 1085
BlsI GCNGC 6 cut(s) 67, 306, 550, 712, 715, 1086
Bme1390I CCNGG 1 cut(s) 120
Bme18I GGWCC 1 cut(s) 1214
BmgT120I GGNCC 2 cut(s) 312, 1214
BmiI GGNNCC 1 cut(s) 313
BmrFI CCNGG 1 cut(s) 120
BmsI GCATC 5 cut(s) 171, 269, 346, 535, 1027
BoxI GACNNNNGTC 1 cut(s) 746
BpiI GAAGAC 2 cut(s) 590, 1088
BplI GAGNNNNNCTC 6 cut(s) 377, 409, 379, 411, 497, 529
BpmI CTGGAG 2 cut(s) 251, 537
Bsa29I ATCGAT 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 754
BsaJI CCNNGG 3 cut(s) 71, 144, 684
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 2 cut(s) 1078, 1223
Bse1I ACTGG 2 cut(s) 268, 1017
Bse21I CCTNAGG 1 cut(s) 1210
Bse3DI GCAATG 1 cut(s) 934
BseBI CCWGG 1 cut(s) 120
BseCI ATCGAT 1 cut(s) 179
BseDI CCNNGG 3 cut(s) 71, 144, 684
BseGI GGATG 3 cut(s) 508, 1039, 1163
BseLI CCNNNNNNNGG 2 cut(s) 1078, 1223
BseMI GCAATG 1 cut(s) 934
BseMII CTCAG 3 cut(s) 410, 593, 1224
BseNI ACTGG 2 cut(s) 268, 1017
BseRI GAGGAG 1 cut(s) 852
BseSI GKGCMC 1 cut(s) 914
BseXI GCAGC 6 cut(s) 52, 291, 535, 722, 725, 1071
BseYI CCCAGC 1 cut(s) 1078
BshFI GGCC 5 cut(s) 143, 314, 755, 772, 998
BshVI ATCGAT 1 cut(s) 179
BsiHKAI GWGCWC 2 cut(s) 901, 914
BslFI GGGAC 1 cut(s) 618
BslI CCNNNNNNNGG 2 cut(s) 1078, 1223
BsmAI GTCTC 2 cut(s) 3, 754
BsmBI CGTCTC 1 cut(s) 3
BsmFI GGGAC 1 cut(s) 618
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 5 cut(s) 143, 314, 755, 772, 998
Bso31I GGTCTC 1 cut(s) 754
Bsp1286I GDGCHC 2 cut(s) 901, 914
Bsp143I GATC 2 cut(s) 652, 734
Bsp19I CCATGG 2 cut(s) 71, 684
BspACI CCGC 1 cut(s) 92
BspANI GGCC 5 cut(s) 143, 314, 755, 772, 998
BspCNI CTCAG 3 cut(s) 409, 592, 1223
BspDI ATCGAT 1 cut(s) 179
BspLI GGNNCC 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 1225
BspPI GGATC 2 cut(s) 647, 742
BspTI CTTAAG 1 cut(s) 905
BspTNI GGTCTC 1 cut(s) 754
BsrDI GCAATG 1 cut(s) 934
BsrI ACTGG 2 cut(s) 268, 1017
BssECI CCNNGG 3 cut(s) 71, 144, 684
BssMI GATC 2 cut(s) 652, 734
BssT1I CCWWGG 3 cut(s) 71, 144, 684
Bst2UI CCWGG 1 cut(s) 120
Bst4CI ACNGT 4 cut(s) 338, 350, 409, 920
BstAFI CTTAAG 1 cut(s) 905
BstAPI GCANNNNNTGC 1 cut(s) 719
BstC8I GCNNGC 3 cut(s) 141, 724, 801
BstDEI CTNAG 4 cut(s) 396, 579, 1088, 1210
BstDSI CCRYGG 2 cut(s) 71, 684
BstF5I GGATG 3 cut(s) 508, 1039, 1163
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 2 cut(s) 125, 139
BstKTI GATC 2 cut(s) 655, 737
BstMAI GTCTC 2 cut(s) 3, 754
BstMBI GATC 2 cut(s) 652, 734
BstMWI GCNNNNNNNGC 4 cut(s) 136, 719, 1084, 1144
BstNI CCWGG 1 cut(s) 120
BstNSI RCATGY 2 cut(s) 370, 803
BstPAI GACNNNNGTC 1 cut(s) 746
BstSCI CCNGG 1 cut(s) 118
BstSLI GKGCMC 1 cut(s) 914
BstV1I GCAGC 6 cut(s) 52, 291, 535, 722, 725, 1071
BstV2I GAAGAC 2 cut(s) 590, 1088
BstXI CCANNNNNNTGG 1 cut(s) 1180
Bsu15I ATCGAT 1 cut(s) 179
Bsu36I CCTNAGG 1 cut(s) 1210
BsuRI GGCC 5 cut(s) 143, 314, 755, 772, 998
BsuTUI ATCGAT 1 cut(s) 179
BtgI CCRYGG 2 cut(s) 71, 684
BtsCI GGATG 3 cut(s) 508, 1039, 1163
BtsIMutI CAGTG 6 cut(s) 275, 343, 346, 665, 744, 1024
BveI ACCTGC 1 cut(s) 1225
Cac8I GCNNGC 3 cut(s) 141, 724, 801
CaiI CAGNNNCTG 1 cut(s) 1217
CfoI GCGC 2 cut(s) 125, 139
Cfr13I GGNCC 2 cut(s) 312, 1214
ClaI ATCGAT 1 cut(s) 179
Csp6I GTAC 4 cut(s) 459, 982, 1068, 1190
CspCI CAANNNNNGTGG 2 cut(s) 251, 286
CviQI GTAC 4 cut(s) 459, 982, 1068, 1190
DdeI CTNAG 4 cut(s) 396, 579, 1088, 1210
DpnI GATC 2 cut(s) 654, 736
DpnII GATC 2 cut(s) 652, 734
Eco130I CCWWGG 3 cut(s) 71, 144, 684
Eco147I AGGCCT 1 cut(s) 143
Eco31I GGTCTC 1 cut(s) 754
Eco47I GGWCC 1 cut(s) 1214
Eco57I CTGAAG 1 cut(s) 509
Eco81I CCTNAGG 1 cut(s) 1210
EcoO109I RGGNCCY 1 cut(s) 1214
EcoRII CCWGG 1 cut(s) 118
EcoT14I CCWWGG 3 cut(s) 71, 144, 684
ErhI CCWWGG 3 cut(s) 71, 144, 684
Esp3I CGTCTC 1 cut(s) 3
FalI AAGNNNNNCTT 2 cut(s) 200, 232
FaqI GGGAC 1 cut(s) 618
FauI CCCGC 1 cut(s) 99
FauNDI CATATG 1 cut(s) 679
Fnu4HI GCNGC 6 cut(s) 66, 305, 549, 711, 714, 1085
FokI GGATG 3 cut(s) 515, 1046, 1150
Fsp4HI GCNGC 6 cut(s) 66, 305, 549, 711, 714, 1085
FspBI CTAG 2 cut(s) 308, 630
FspI TGCGCA 1 cut(s) 138
GlaI GCGC 2 cut(s) 124, 138
GluI GCNGC 6 cut(s) 66, 305, 549, 711, 714, 1085
GsaI CCCAGC 1 cut(s) 1082
GsuI CTGGAG 2 cut(s) 251, 537
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 5 cut(s) 143, 314, 755, 772, 998
HhaI GCGC 2 cut(s) 125, 139
Hin6I GCGC 2 cut(s) 123, 137
HinP1I GCGC 2 cut(s) 123, 137
HinfI GANTC 3 cut(s) 79, 512, 618
HphI GGTGA 4 cut(s) 80, 95, 304, 412
Hpy166II GTNNAC 4 cut(s) 403, 449, 912, 1068
Hpy188I TCNGA 3 cut(s) 112, 259, 582
Hpy188III TCNNGA 6 cut(s) 41, 202, 554, 698, 766, 1212
Hpy8I GTNNAC 4 cut(s) 403, 449, 912, 1068
Hpy99I CGWCG 1 cut(s) 224
HpyCH4III ACNGT 4 cut(s) 338, 350, 409, 920
HpyCH4IV ACGT 1 cut(s) 461
HpyCH4V TGCA 5 cut(s) 282, 359, 722, 912, 951
HpyF10VI GCNNNNNNNGC 4 cut(s) 136, 719, 1084, 1144
HpyF3I CTNAG 4 cut(s) 396, 579, 1088, 1210
HpySE526I ACGT 1 cut(s) 461
HspAI GCGC 2 cut(s) 123, 137
Kzo9I GATC 2 cut(s) 652, 734
LmnI GCTCC 4 cut(s) 73, 556, 808, 1245
Lsp1109I GCAGC 6 cut(s) 52, 291, 535, 722, 725, 1071
LweI GCATC 5 cut(s) 171, 269, 346, 535, 1027
MaeI CTAG 2 cut(s) 308, 630
MaeII ACGT 1 cut(s) 461
MaeIII GTNAC 3 cut(s) 466, 739, 932
MalI GATC 2 cut(s) 654, 736
MboI GATC 2 cut(s) 652, 734
MboII GAAGA 6 cut(s) 164, 595, 966, 969, 1088, 1241
MfeI CAATTG 2 cut(s) 717, 1133
MhlI GDGCHC 2 cut(s) 901, 914
MluCI AATT 7 cut(s) 377, 423, 593, 717, 827, 965, 1133
MlyI GAGTC 1 cut(s) 506
MmeI TCCRAC 1 cut(s) 357
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 1 cut(s) 906
MslI CAYNNNNRTG 2 cut(s) 444, 1008
MspA1I CMGCKG 1 cut(s) 94
MspCI CTTAAG 1 cut(s) 905
MspR9I CCNGG 1 cut(s) 120
MunI CAATTG 2 cut(s) 717, 1133
Mva1269I GAATGC 1 cut(s) 67
MvaI CCWGG 1 cut(s) 120
MwoI GCNNNNNNNGC 4 cut(s) 136, 719, 1084, 1144
NcoI CCATGG 2 cut(s) 71, 684
NdeI CATATG 1 cut(s) 679
NdeII GATC 2 cut(s) 652, 734
NlaIV GGNNCC 1 cut(s) 313
NmeAIII GCCGAG 1 cut(s) 731
NmuCI GTSAC 2 cut(s) 739, 932
NsbI TGCGCA 1 cut(s) 138
NspI RCATGY 2 cut(s) 370, 803
PaeI GCATGC 1 cut(s) 803
PceI AGGCCT 1 cut(s) 143
PctI GAATGC 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 2 cut(s) 79, 618
PflMI CCANNNNNTGG 1 cut(s) 1078
PkrI GCNGC 6 cut(s) 67, 306, 550, 712, 715, 1086
PleI GAGTC 1 cut(s) 506
PpsI GAGTC 1 cut(s) 506
PpuMI RGGWCCY 1 cut(s) 1214
PshAI GACNNNNGTC 1 cut(s) 746
PsiI TTATAA 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 1214
Psp6I CCWGG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 1078
PspGI CCWGG 1 cut(s) 118
PspN4I GGNNCC 1 cut(s) 313
PspPI GGNCC 2 cut(s) 312, 1214
PspPPI RGGWCCY 1 cut(s) 1214
PstNI CAGNNNCTG 1 cut(s) 1217
RsaI GTAC 4 cut(s) 460, 983, 1069, 1191
RsaNI GTAC 4 cut(s) 459, 982, 1068, 1190
RseI CAYNNNNRTG 2 cut(s) 444, 1008
SaqAI TTAA 1 cut(s) 906
SatI GCNGC 6 cut(s) 66, 305, 549, 711, 714, 1085
Sau3AI GATC 2 cut(s) 652, 734
Sau96I GGNCC 2 cut(s) 312, 1214
SchI GAGTC 1 cut(s) 506
ScrFI CCNGG 1 cut(s) 120
SduI GDGCHC 2 cut(s) 901, 914
SfaNI GCATC 5 cut(s) 171, 269, 346, 535, 1027
SinI GGWCC 1 cut(s) 1214
SmiMI CAYNNNNRTG 2 cut(s) 444, 1008
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
SphI GCATGC 1 cut(s) 803
Sse9I AATT 7 cut(s) 377, 423, 593, 717, 827, 965, 1133
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 1 cut(s) 92
SspI AATATT 1 cut(s) 851
SspMI CTAG 2 cut(s) 308, 630
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 1 cut(s) 118
StyI CCWWGG 3 cut(s) 71, 144, 684
TaaI ACNGT 4 cut(s) 338, 350, 409, 920
TaiI ACGT 1 cut(s) 464
TaqI TCGA 4 cut(s) 42, 179, 222, 320
TasI AATT 7 cut(s) 377, 423, 593, 717, 827, 965, 1133
TfiI GAWTC 2 cut(s) 79, 618
Tru1I TTAA 1 cut(s) 906
Tru9I TTAA 1 cut(s) 906
TscAI CASTG 6 cut(s) 275, 343, 353, 672, 744, 1024
TseFI GTSAC 2 cut(s) 739, 932
TseI GCWGC 6 cut(s) 65, 304, 548, 710, 713, 1084
Tsp45I GTSAC 2 cut(s) 739, 932
TspDTI ATGAA 5 cut(s) 428, 559, 605, 627, 798
TspGWI ACGGA 1 cut(s) 27
TspRI CASTG 6 cut(s) 275, 343, 353, 672, 744, 1024
Van91I CCANNNNNTGG 1 cut(s) 1078
Vha464I CTTAAG 1 cut(s) 905
VneI GTGCAC 1 cut(s) 910
VpaK11BI GGWCC 1 cut(s) 1214
XapI RAATTY 1 cut(s) 593
XceI RCATGY 2 cut(s) 370, 803
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 2 cut(s) 308, 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.