gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 642 |
| AcsI | RAATTY | 3 cut(s) | 220, 289, 326 |
| AfaI | GTAC | 3 cut(s) | 456, 581, 784 |
| AgsI | TTSAA | 9 cut(s) | 43, 91, 119, 197, 295, 398, 832, 863, 886 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 388 |
| AhlI | ACTAGT | 1 cut(s) | 457 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 566, 598 |
| AluBI | AGCT | 3 cut(s) | 25, 152, 323 |
| AluI | AGCT | 3 cut(s) | 25, 152, 323 |
| Alw21I | GWGCWC | 2 cut(s) | 71, 137 |
| Alw26I | GTCTC | 2 cut(s) | 99, 235 |
| AoxI | GGCC | 1 cut(s) | 680 |
| ApoI | RAATTY | 3 cut(s) | 220, 289, 326 |
| AspS9I | GGNCC | 3 cut(s) | 680, 702, 722 |
| AsuHPI | GGTGA | 3 cut(s) | 32, 59, 757 |
| AsuII | TTCGAA | 1 cut(s) | 143 |
| AvaII | GGWCC | 2 cut(s) | 702, 722 |
| Bbv12I | GWGCWC | 2 cut(s) | 71, 137 |
| BccI | CCATC | 1 cut(s) | 550 |
| BcoDI | GTCTC | 2 cut(s) | 99, 235 |
| BcuI | ACTAGT | 1 cut(s) | 457 |
| BfaI | CTAG | 1 cut(s) | 458 |
| Bme18I | GGWCC | 2 cut(s) | 702, 722 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 388 |
| BmgT120I | GGNCC | 3 cut(s) | 680, 702, 722 |
| BmsI | GCATC | 1 cut(s) | 154 |
| BpmI | CTGGAG | 1 cut(s) | 33 |
| Bpu14I | TTCGAA | 1 cut(s) | 143 |
| BpuEI | CTTGAG | 1 cut(s) | 322 |
| BsaBI | GATNNNNATC | 1 cut(s) | 817 |
| Bse1I | ACTGG | 1 cut(s) | 445 |
| Bse8I | GATNNNNATC | 1 cut(s) | 817 |
| BseGI | GGATG | 2 cut(s) | 81, 795 |
| BseJI | GATNNNNATC | 1 cut(s) | 817 |
| BseMII | CTCAG | 3 cut(s) | 17, 150, 813 |
| BseNI | ACTGG | 1 cut(s) | 445 |
| BseRI | GAGGAG | 1 cut(s) | 580 |
| BshFI | GGCC | 1 cut(s) | 682 |
| BsiHKAI | GWGCWC | 2 cut(s) | 71, 137 |
| BsmAI | GTCTC | 2 cut(s) | 99, 235 |
| BsmI | GAATGC | 1 cut(s) | 629 |
| BsnI | GGCC | 1 cut(s) | 682 |
| Bsp119I | TTCGAA | 1 cut(s) | 143 |
| Bsp1286I | GDGCHC | 2 cut(s) | 71, 137 |
| BspANI | GGCC | 1 cut(s) | 682 |
| BspCNI | CTCAG | 3 cut(s) | 18, 149, 814 |
| BspT104I | TTCGAA | 1 cut(s) | 143 |
| BsrI | ACTGG | 1 cut(s) | 445 |
| Bst4CI | ACNGT | 3 cut(s) | 47, 736, 859 |
| BstBI | TTCGAA | 1 cut(s) | 143 |
| BstDEI | CTNAG | 7 cut(s) | 26, 136, 281, 552, 809, 822, 893 |
| BstF5I | GGATG | 2 cut(s) | 81, 795 |
| BstMAI | GTCTC | 2 cut(s) | 99, 235 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 440 |
| BsuRI | GGCC | 1 cut(s) | 682 |
| BtsCI | GGATG | 2 cut(s) | 81, 795 |
| Cfr13I | GGNCC | 3 cut(s) | 680, 702, 722 |
| Csp6I | GTAC | 3 cut(s) | 455, 580, 783 |
| CviAII | CATG | 3 cut(s) | 98, 359, 436 |
| CviJI | RGCY | 7 cut(s) | 25, 82, 152, 323, 682, 746, 854 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 82, 152, 323, 682, 746, 854 |
| CviQI | GTAC | 3 cut(s) | 455, 580, 783 |
| DdeI | CTNAG | 7 cut(s) | 26, 136, 281, 552, 809, 822, 893 |
| DriI | GACNNNNNGTC | 1 cut(s) | 388 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 388 |
| Eco47I | GGWCC | 2 cut(s) | 702, 722 |
| FaeI | CATG | 3 cut(s) | 101, 362, 439 |
| FatI | CATG | 3 cut(s) | 97, 358, 435 |
| FokI | GGATG | 2 cut(s) | 88, 802 |
| FspBI | CTAG | 1 cut(s) | 458 |
| GsuI | CTGGAG | 1 cut(s) | 33 |
| HaeIII | GGCC | 1 cut(s) | 682 |
| Hin1II | CATG | 3 cut(s) | 101, 362, 439 |
| HinfI | GANTC | 3 cut(s) | 140, 158, 652 |
| HphI | GGTGA | 3 cut(s) | 32, 59, 757 |
| Hpy166II | GTNNAC | 5 cut(s) | 415, 547, 705, 722, 802 |
| Hpy188I | TCNGA | 4 cut(s) | 139, 163, 789, 823 |
| Hpy188III | TCNNGA | 4 cut(s) | 12, 197, 312, 600 |
| Hpy8I | GTNNAC | 5 cut(s) | 415, 547, 705, 722, 802 |
| HpyAV | CCTTC | 2 cut(s) | 166, 354 |
| HpyCH4III | ACNGT | 3 cut(s) | 47, 736, 859 |
| HpyCH4IV | ACGT | 1 cut(s) | 642 |
| HpyF3I | CTNAG | 7 cut(s) | 26, 136, 281, 552, 809, 822, 893 |
| HpySE526I | ACGT | 1 cut(s) | 642 |
| Hsp92II | CATG | 3 cut(s) | 101, 362, 439 |
| LmnI | GCTCC | 1 cut(s) | 66 |
| LpnPI | CCDG | 8 cut(s) | 297, 426, 489, 524, 605, 663, 679, 732 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 458 |
| MaeII | ACGT | 1 cut(s) | 642 |
| MaeIII | GTNAC | 3 cut(s) | 428, 736, 899 |
| MboII | GAAGA | 5 cut(s) | 31, 300, 410, 461, 898 |
| MfeI | CAATTG | 1 cut(s) | 509 |
| MhlI | GDGCHC | 2 cut(s) | 71, 137 |
| MluCI | AATT | 9 cut(s) | 52, 220, 289, 304, 326, 480, 509, 697, 863 |
| MnlI | CCTC | 8 cut(s) | 8, 184, 193, 558, 615, 773, 817, 899 |
| MseI | TTAA | 2 cut(s) | 840, 849 |
| MslI | CAYNNNNRTG | 2 cut(s) | 74, 554 |
| MunI | CAATTG | 1 cut(s) | 509 |
| Mva1269I | GAATGC | 1 cut(s) | 629 |
| NlaIII | CATG | 3 cut(s) | 101, 362, 439 |
| NmuCI | GTSAC | 1 cut(s) | 899 |
| NspV | TTCGAA | 1 cut(s) | 143 |
| PctI | GAATGC | 1 cut(s) | 629 |
| PfeI | GAWTC | 3 cut(s) | 140, 158, 652 |
| Psp1406I | AACGTT | 1 cut(s) | 642 |
| PspPI | GGNCC | 3 cut(s) | 680, 702, 722 |
| RsaI | GTAC | 3 cut(s) | 456, 581, 784 |
| RsaNI | GTAC | 3 cut(s) | 455, 580, 783 |
| RseI | CAYNNNNRTG | 2 cut(s) | 74, 554 |
| SaqAI | TTAA | 2 cut(s) | 840, 849 |
| Sau96I | GGNCC | 3 cut(s) | 680, 702, 722 |
| SduI | GDGCHC | 2 cut(s) | 71, 137 |
| SetI | ASST | 9 cut(s) | 19, 27, 154, 195, 204, 325, 645, 770, 828 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SfuI | TTCGAA | 1 cut(s) | 143 |
| SinI | GGWCC | 2 cut(s) | 702, 722 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 74, 554 |
| SmlI | CTYRAG | 1 cut(s) | 337 |
| SmoI | CTYRAG | 1 cut(s) | 337 |
| SpeI | ACTAGT | 1 cut(s) | 457 |
| Sse9I | AATT | 9 cut(s) | 52, 220, 289, 304, 326, 480, 509, 697, 863 |
| SspMI | CTAG | 1 cut(s) | 458 |
| TaaI | ACNGT | 3 cut(s) | 47, 736, 859 |
| TaiI | ACGT | 1 cut(s) | 645 |
| TaqI | TCGA | 1 cut(s) | 143 |
| TasI | AATT | 9 cut(s) | 52, 220, 289, 304, 326, 480, 509, 697, 863 |
| TatI | WGTACW | 2 cut(s) | 454, 782 |
| TfiI | GAWTC | 3 cut(s) | 140, 158, 652 |
| Tru1I | TTAA | 2 cut(s) | 840, 849 |
| Tru9I | TTAA | 2 cut(s) | 840, 849 |
| TseFI | GTSAC | 1 cut(s) | 899 |
| Tsp45I | GTSAC | 1 cut(s) | 899 |
| TspDTI | ATGAA | 5 cut(s) | 92, 171, 230, 626, 770 |
| VpaK11BI | GGWCC | 2 cut(s) | 702, 722 |
| XapI | RAATTY | 3 cut(s) | 220, 289, 326 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 690 |
| XspI | CTAG | 1 cut(s) | 458 |