Rw2G003790

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000106
Physical Location & Seq
Reverse (-)
3594013 .. 3595854
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G003790.1

Sequence Viewer

Length: 1236 bp
ATGGCTGGCGACGAAGAACATAAATCCCAACACCTACTCGTGAAGGGTTCAGCAACTTCCAGGGCTGCAGCACCATGGGAGAACTCTACTCATCCACTCTTTATCCACCACTCAGACCAACCGGGGGTCATGTTGGTTTCTGAGCCTTTGGCGGAGGACAATTACTCAATATGGGCACCTTCGATTATGATGGCACTCGAAATCAAGAACAAAGCTGGATTTGTCAATGGAACTCTTACAAGGTCACAAATCAACGAAGAAGAAGCTCTCCAATGGGACAGATGTAACACTCTCGTAAAGAATTGGCTCATCTCGTCTATGGCAAAGAACATGTCCAAATCTGTGATTCACCGTAAGGAGGCTCGAACTATATGGCTGGAATTAAAGGATCGTTTCGATCAAACAAATTCCGTTGCCCTATTCCGAGTTGAAGGCAACATACACAACTGTGAACAGGGAAGCCGTTCTGTCACGACCTACTACATGGACTTGAAAGGGATGTGGGATGAGAAAGATGTTCTATGTTCCTTTCCTTCATGCACCTGTGATGCAGCGGCAGAGATTAACAAATTCATGGAGGCACAGAAGACAATGAAGTTTCTTATGGGTTTGAATGAAAGCTTTGAACAAACTCGTGGAAACATAATAGGTATGGATCCTCTACCAAGCTTGAGTAAGGCATATGCTATTGTGCATCGGCATGAGAAGCAATCACAGGTTGTGGCAGGAAAGGACATTGCAGTTCCAGAATCTGCAGCTTTCTCCGTCAAAGGTTTGGGCCGAGAACCCAATGTTGCAGACAGGGAAGCCGCCGACTCCTCCATCAACTCTGTCAAGAAAGGGAATCGTGATCGACGTTCTGAAAGAGCAAGTGACTTTCGTCGATCCGATGGAGGAAGCAGGTATTGTGAGAAATGTGATATGACTAACCACAGTACCAAATATTGCAGAGCTCACTTCACATGTTCCTACTGCAACTTGAAAGGACATTCACAAGCGTATTGCCATAAACGGAAGAATGATATTGCAAACGGAAGGTTGCAACAGTCCAAGGCAAACCTTGTTGGAGCACATGATACCGAAGGATTTCCTCTCACAAAACAAGAGTGTCAACGCTTCCTCAACAAGCTCATGGCCCAATCACAATCATCTTCTGCGAACTTGGTCGGTAATATACAAAATTATGAAGAGTTATCGGGACCTACGATCGGGGAAGATGATTGGGACGGGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2

Protein Analysis

411

Amino Acids

46.06

Weight (kDa)

6.92

Isoelectric Point (pI)

52.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 36 - 79 1.2e-16 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 891
AccB1I GGYRCC 1 cut(s) 175
AciI CCGC 3 cut(s) 152, 554, 810
AclWI GGATC 4 cut(s) 396, 650, 663, 879
AcsI RAATTY 2 cut(s) 406, 569
AfaI GTAC 1 cut(s) 937
AfiI CCNNNNNNNGG 3 cut(s) 124, 358, 1208
AflIII ACRYGT 2 cut(s) 330, 962
AgsI TTSAA 5 cut(s) 431, 493, 613, 626, 982
AjnI CCWGG 1 cut(s) 59
AleI CACNNNNGTG 1 cut(s) 447
AluBI AGCT 7 cut(s) 215, 266, 621, 669, 758, 953, 1129
AluI AGCT 7 cut(s) 215, 266, 621, 669, 758, 953, 1129
Alw21I GWGCWC 2 cut(s) 955, 1072
AlwI GGATC 4 cut(s) 396, 650, 663, 879
AlwNI CAGNNNCTG 1 cut(s) 752
AoxI GGCC 2 cut(s) 778, 1134
ApeKI GCWGC 4 cut(s) 65, 68, 551, 755
ApoI RAATTY 2 cut(s) 406, 569
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
Asp700I GAANNNNTTC 2 cut(s) 463, 1086
AspS9I GGNCC 3 cut(s) 778, 1135, 1199
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 1 cut(s) 341
AvaII GGWCC 1 cut(s) 1199
BaeGI GKGCMC 1 cut(s) 178
BaeI ACNNNNGTAYC 2 cut(s) 919, 952
BamHI GGATCC 1 cut(s) 655
BanI GGYRCC 1 cut(s) 175
BanII GRGCYC 1 cut(s) 955
BarI GAAGNNNNNNTAC 2 cut(s) 423, 455
BauI CACGAG 2 cut(s) 38, 633
BbsI GAAGAC 1 cut(s) 593
Bbv12I GWGCWC 2 cut(s) 955, 1072
BbvI GCAGC 4 cut(s) 52, 80, 563, 767
BccI CCATC 3 cut(s) 184, 830, 884
BceAI ACGGC 1 cut(s) 447
BciT130I CCWGG 1 cut(s) 61
BcnI CCSGG 1 cut(s) 123
BfmI CTRYAG 2 cut(s) 66, 753
BfuAI ACCTGC 1 cut(s) 891
BisI GCNGC 6 cut(s) 66, 69, 552, 555, 756, 810
BlsI GCNGC 6 cut(s) 67, 70, 553, 556, 757, 811
Bme1390I CCNGG 2 cut(s) 61, 123
Bme18I GGWCC 1 cut(s) 1199
BmgT120I GGNCC 3 cut(s) 778, 1135, 1199
BmiI GGNNCC 3 cut(s) 177, 657, 1200
BmrFI CCNGG 2 cut(s) 61, 123
BmsI GCATC 2 cut(s) 538, 703
BoxI GACNNNNGTC 1 cut(s) 879
BpiI GAAGAC 1 cut(s) 593
BpuEI CTTGAG 1 cut(s) 691
BpuMI CCSGG 1 cut(s) 123
BsaJI CCNNGG 4 cut(s) 60, 74, 122, 1050
Bsc4I CCNNNNNNNGG 3 cut(s) 124, 358, 1208
Bse3DI GCAATG 1 cut(s) 735
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 4 cut(s) 60, 74, 122, 1050
BseGI GGATG 3 cut(s) 91, 504, 511
BseLI CCNNNNNNNGG 3 cut(s) 124, 358, 1208
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 2 cut(s) 126, 132
BseRI GAGGAG 1 cut(s) 808
BseSI GKGCMC 1 cut(s) 178
BseXI GCAGC 4 cut(s) 52, 80, 563, 767
Bsh1285I CGRYCG 1 cut(s) 1209
BshFI GGCC 2 cut(s) 780, 1136
BshNI GGYRCC 1 cut(s) 175
BsiEI CGRYCG 1 cut(s) 1209
BsiHKAI GWGCWC 2 cut(s) 955, 1072
BsiSI CCGG 1 cut(s) 122
BslFI GGGAC 2 cut(s) 290, 1212
BslI CCNNNNNNNGG 3 cut(s) 124, 358, 1208
BsmFI GGGAC 2 cut(s) 290, 1212
BsnI GGCC 2 cut(s) 780, 1136
Bsp1286I GDGCHC 3 cut(s) 178, 955, 1072
Bsp143I GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
Bsp19I CCATGG 1 cut(s) 74
BspACI CCGC 3 cut(s) 152, 554, 810
BspANI GGCC 2 cut(s) 780, 1136
BspCNI CTCAG 2 cut(s) 125, 133
BspLI GGNNCC 3 cut(s) 177, 657, 1200
BspMAI CTGCAG 2 cut(s) 70, 757
BspMI ACCTGC 1 cut(s) 891
BspPI GGATC 4 cut(s) 396, 650, 663, 879
BspT107I GGYRCC 1 cut(s) 175
BsrDI GCAATG 1 cut(s) 735
BssECI CCNNGG 4 cut(s) 60, 74, 122, 1050
BssMI GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
BssSI CACGAG 2 cut(s) 38, 633
BssT1I CCWWGG 2 cut(s) 74, 1050
Bst2BI CACGAG 2 cut(s) 38, 633
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 4 cut(s) 353, 449, 935, 1047
Bst6I CTCTTC 1 cut(s) 1182
BstC8I GCNNGC 1 cut(s) 7
BstDEI CTNAG 2 cut(s) 112, 141
BstDSI CCRYGG 1 cut(s) 74
BstF5I GGATG 3 cut(s) 91, 504, 511
BstKTI GATC 6 cut(s) 391, 400, 658, 853, 887, 1209
BstMBI GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
BstMCI CGRYCG 1 cut(s) 1209
BstMWI GCNNNNNNNGC 1 cut(s) 706
BstNI CCWGG 1 cut(s) 61
BstNSI RCATGY 2 cut(s) 334, 966
BstPAI GACNNNNGTC 1 cut(s) 879
BstSCI CCNGG 2 cut(s) 59, 121
BstSFI CTRYAG 2 cut(s) 66, 753
BstSLI GKGCMC 1 cut(s) 178
BstV1I GCAGC 4 cut(s) 52, 80, 563, 767
BstV2I GAAGAC 1 cut(s) 593
BstX2I RGATCY 1 cut(s) 655
BstYI RGATCY 1 cut(s) 655
BsuRI GGCC 2 cut(s) 780, 1136
BtgI CCRYGG 1 cut(s) 74
BtsCI GGATG 3 cut(s) 91, 504, 511
BveI ACCTGC 1 cut(s) 891
Cac8I GCNNGC 1 cut(s) 7
CaiI CAGNNNCTG 1 cut(s) 752
Cfr13I GGNCC 3 cut(s) 778, 1135, 1199
Csp6I GTAC 1 cut(s) 936
CviQI GTAC 1 cut(s) 936
DdeI CTNAG 2 cut(s) 112, 141
DpnI GATC 6 cut(s) 390, 399, 657, 852, 886, 1208
DpnII GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
Eam1104I CTCTTC 1 cut(s) 1182
EarI CTCTTC 1 cut(s) 1182
EciI GGCGGA 1 cut(s) 167
Ecl136II GAGCTC 1 cut(s) 953
Eco130I CCWWGG 2 cut(s) 74, 1050
Eco24I GRGCYC 1 cut(s) 955
Eco47I GGWCC 1 cut(s) 1199
Eco53kI GAGCTC 1 cut(s) 953
EcoICRI GAGCTC 1 cut(s) 953
EcoO109I RGGNCCY 1 cut(s) 1199
EcoRII CCWGG 1 cut(s) 59
EcoT14I CCWWGG 2 cut(s) 74, 1050
EcoT38I GRGCYC 1 cut(s) 955
ErhI CCWWGG 2 cut(s) 74, 1050
FaqI GGGAC 2 cut(s) 290, 1212
FauNDI CATATG 1 cut(s) 682
Fnu4HI GCNGC 6 cut(s) 66, 69, 552, 555, 756, 810
FokI GGATG 3 cut(s) 78, 511, 518
FriOI GRGCYC 1 cut(s) 955
Fsp4HI GCNGC 6 cut(s) 66, 69, 552, 555, 756, 810
GluI GCNGC 6 cut(s) 66, 69, 552, 555, 756, 810
HaeIII GGCC 2 cut(s) 780, 1136
HapII CCGG 1 cut(s) 122
HincII GTYRAC 1 cut(s) 1112
HindII GTYRAC 1 cut(s) 1112
HindIII AAGCTT 2 cut(s) 619, 667
HinfI GANTC 4 cut(s) 346, 749, 815, 844
HpaII CCGG 1 cut(s) 122
HphI GGTGA 1 cut(s) 341
Hpy166II GTNNAC 2 cut(s) 452, 1112
Hpy188I TCNGA 5 cut(s) 115, 142, 425, 862, 889
Hpy188III TCNNGA 7 cut(s) 40, 205, 472, 746, 835, 848, 1197
Hpy8I GTNNAC 2 cut(s) 452, 1112
Hpy99I CGWCG 3 cut(s) 14, 858, 885
HpyAV CCTTC 6 cut(s) 37, 189, 425, 543, 1029, 1076
HpyCH4III ACNGT 4 cut(s) 353, 449, 935, 1047
HpyCH4IV ACGT 1 cut(s) 856
HpyF10VI GCNNNNNNNGC 1 cut(s) 706
HpyF3I CTNAG 2 cut(s) 112, 141
HpySE526I ACGT 1 cut(s) 856
Kzo9I GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
LmnI GCTCC 1 cut(s) 1067
Lsp1109I GCAGC 4 cut(s) 52, 80, 563, 767
LweI GCATC 2 cut(s) 538, 703
MaeII ACGT 1 cut(s) 856
MaeIII GTNAC 4 cut(s) 243, 284, 469, 872
MalI GATC 6 cut(s) 390, 399, 657, 852, 886, 1208
MboI GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
MboII GAAGA 8 cut(s) 26, 269, 272, 598, 1027, 1143, 1199, 1226
MflI RGATCY 1 cut(s) 655
MhlI GDGCHC 3 cut(s) 178, 955, 1072
MluCI AATT 6 cut(s) 160, 301, 380, 406, 569, 1180
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 1 cut(s) 1045
MnlI CCTC 8 cut(s) 148, 352, 571, 669, 829, 887, 1101, 1130
MroXI GAANNNNTTC 2 cut(s) 463, 1086
MseI TTAA 2 cut(s) 383, 564
MslI CAYNNNNRTG 2 cut(s) 447, 699
MspA1I CMGCKG 1 cut(s) 554
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 2 cut(s) 61, 123
MvaI CCWGG 1 cut(s) 61
MwoI GCNNNNNNNGC 1 cut(s) 706
NciI CCSGG 1 cut(s) 123
NcoI CCATGG 1 cut(s) 74
NdeI CATATG 1 cut(s) 682
NdeII GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
NlaIV GGNNCC 3 cut(s) 177, 657, 1200
NmeAIII GCCGAG 1 cut(s) 806
NmuCI GTSAC 3 cut(s) 243, 469, 872
NspI RCATGY 2 cut(s) 334, 966
OliI CACNNNNGTG 1 cut(s) 447
PciI ACATGT 2 cut(s) 330, 962
PcsI WCGNNNNNNNCGW 2 cut(s) 853, 1202
PdmI GAANNNNTTC 2 cut(s) 463, 1086
PfeI GAWTC 3 cut(s) 346, 749, 844
PkrI GCNGC 6 cut(s) 67, 70, 553, 556, 757, 811
Ple19I CGATCG 1 cut(s) 1209
PleI GAGTC 1 cut(s) 809
PpsI GAGTC 1 cut(s) 809
PpuMI RGGWCCY 1 cut(s) 1199
PscI ACATGT 2 cut(s) 330, 962
PshAI GACNNNNGTC 1 cut(s) 879
Psp124BI GAGCTC 1 cut(s) 955
Psp5II RGGWCCY 1 cut(s) 1199
Psp6I CCWGG 1 cut(s) 59
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 3 cut(s) 177, 657, 1200
PspPI GGNCC 3 cut(s) 778, 1135, 1199
PspPPI RGGWCCY 1 cut(s) 1199
PstI CTGCAG 2 cut(s) 70, 757
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 1 cut(s) 655
PvuI CGATCG 1 cut(s) 1209
RsaI GTAC 1 cut(s) 937
RsaNI GTAC 1 cut(s) 936
RseI CAYNNNNRTG 2 cut(s) 447, 699
SacI GAGCTC 1 cut(s) 955
SaqAI TTAA 2 cut(s) 383, 564
SatI GCNGC 6 cut(s) 66, 69, 552, 555, 756, 810
Sau3AI GATC 6 cut(s) 388, 397, 655, 850, 884, 1206
Sau96I GGNCC 3 cut(s) 778, 1135, 1199
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 2 cut(s) 61, 123
SduI GDGCHC 3 cut(s) 178, 955, 1072
SfaNI GCATC 2 cut(s) 538, 703
SfcI CTRYAG 2 cut(s) 66, 753
SinI GGWCC 1 cut(s) 1199
SmiMI CAYNNNNRTG 2 cut(s) 447, 699
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
Sse9I AATT 6 cut(s) 160, 301, 380, 406, 569, 1180
SsiI CCGC 3 cut(s) 152, 554, 810
SspI AATATT 1 cut(s) 944
SstI GAGCTC 1 cut(s) 955
StyD4I CCNGG 2 cut(s) 59, 121
StyI CCWWGG 2 cut(s) 74, 1050
TaaI ACNGT 4 cut(s) 353, 449, 935, 1047
TaiI ACGT 1 cut(s) 859
TaqI TCGA 6 cut(s) 182, 198, 364, 396, 853, 883
TasI AATT 6 cut(s) 160, 301, 380, 406, 569, 1180
TauI GCSGC 2 cut(s) 557, 812
TfiI GAWTC 3 cut(s) 346, 749, 844
Tru1I TTAA 2 cut(s) 383, 564
Tru9I TTAA 2 cut(s) 383, 564
TseFI GTSAC 3 cut(s) 243, 469, 872
TseI GCWGC 4 cut(s) 65, 68, 551, 755
Tsp45I GTSAC 3 cut(s) 243, 469, 872
TspDTI ATGAA 5 cut(s) 525, 562, 608, 630, 1200
TspGWI ACGGA 4 cut(s) 400, 754, 1027, 1047
VpaK11BI GGWCC 1 cut(s) 1199
XapI RAATTY 2 cut(s) 406, 569
XceI RCATGY 2 cut(s) 334, 966
XmnI GAANNNNTTC 2 cut(s) 463, 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.