Rw6G008460

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000106
Physical Location & Seq
Reverse (-)
14336600 .. 14338038
1439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008460.1

Sequence Viewer

Length: 1146 bp
ATGGCTGGAGACGATATCTTTTCTGAAACTCCCAATGGTGGCAGCGACACCAGCGACACCTCCTCTGATGAATCTGCAAATCCGCTATTCCTCCATCATTCAGACCATCCCGGTCTTATCCTTGTCTCCAAGAAATTGACAGGAGACAATTACAACTCATGGTGTCGCACCATGAGGATCTCCTTGAGTGCAAAGAATAAGACCGGATTCATCACTGGTGCAATCAAAGAACCATCTGCAATCAAGAAACCAGAGGAGCATGCTCTATGGCAGCGATGCAACGACATGGTCTTGTCCTGGATTCTCAATTCTCTTGAACCAGACCTTGCTGATTCGGTCCTCTCCTGCACAACACCTCATGCAATTTGGGAAGACCTCAGGGAACGCTTCGCCTTGGGAAACACCCCACGTGTCTTCCAGGTTCAAAGAGACATCTACAAGATTGAACAAGGCCAATTGTCAATCGCTGCTTATTATACCAAGTTGCAAGCACTTTGGAATGAACTTGCCTCATACAATACAGTGGAGAATTGTACTTGTGGGGCACAGAATGACCGCACCAAACTCATGCAATTCCTTATGGGCTTGAATGAATCGTATGCAGGTACTCGTGGTCAAATTTTGCTAATGAATCCATTACCTTCTGTGAGACAGGCCTATGCTTCAGTAACTCAGGAAGAGAAGCAGCGAGAACTTGGTGTTGCTGCCCTTGCTCCATCCAATGCAGCAGCAATGGCCATTCGTAACAATCTCAGGCCAGGATTGATACCTGGTTACAATCCTGGCAATCAAGGCAGTAGTTCTCGCAATCGCACTCCAGTTCAATGCACCTATTGTAACAAATTTTATCATACTGAGGAGACTTGTCACAGGAAACATGGCTTTCCACCTGGTCATCGGCTCTATAAACGCAATCCACAACAAGGAAATCGACCTCCACCACACAATGATGCCTCTGATAATCATGTTGATTGCACACCTTCATTTAAGGAGCTGCAAGTGACACTTCCCAACCTGACTGAAGATCAATACACTCAGGTTATTGCTGCATTGAATCTGAAGCCACCAACTCCTCAGGCTAATGCCGCTTCTGCTACAGAGTTTGCTTCAGGATTTGGCTATGAGGATGATGATTGGTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

381

Amino Acids

42.28

Weight (kDa)

6.01

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 32 - 79 5.7e-19 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 58 - 231 1.3e-07 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 593
AciI CCGC 3 cut(s) 83, 556, 1086
AclWI GGATC 1 cut(s) 185
AcoI YGGCCR 1 cut(s) 735
AcsI RAATTY 2 cut(s) 618, 842
AcuI CTGAAG 4 cut(s) 648, 1041, 1079, 1092
AcvI CACGTG 1 cut(s) 410
AfaI GTAC 2 cut(s) 535, 607
AfiI CCNNNNNNNGG 2 cut(s) 38, 923
AflIII ACRYGT 1 cut(s) 409
AgsI TTSAA 6 cut(s) 317, 425, 446, 589, 824, 1054
AjnI CCWGG 6 cut(s) 296, 417, 757, 769, 781, 889
AluBI AGCT 1 cut(s) 994
AluI AGCT 1 cut(s) 994
Alw26I GTCTC 6 cut(s) 3, 130, 138, 423, 643, 854
AlwI GGATC 1 cut(s) 185
AoxI GGCC 4 cut(s) 451, 654, 735, 755
ApeKI GCWGC 9 cut(s) 42, 271, 467, 685, 704, 725, 728, 994, 1046
ApoI RAATTY 2 cut(s) 618, 842
AspS9I GGNCC 1 cut(s) 337
AsuC2I CCSGG 1 cut(s) 111
AvaII GGWCC 1 cut(s) 337
AxyI CCTNAGG 2 cut(s) 377, 1074
BaeGI GKGCMC 1 cut(s) 547
BalI TGGCCA 1 cut(s) 737
BauI CACGAG 1 cut(s) 609
BbrPI CACGTG 1 cut(s) 410
BbsI GAAGAC 2 cut(s) 378, 406
BbvI GCAGC 9 cut(s) 54, 283, 454, 691, 697, 737, 740, 981, 1033
BccI CCATC 4 cut(s) 102, 114, 241, 724
BciT130I CCWGG 6 cut(s) 298, 419, 759, 771, 783, 891
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 6 cut(s) 3, 130, 138, 423, 643, 854
BfmI CTRYAG 1 cut(s) 1095
BfuAI ACCTGC 1 cut(s) 593
Bme1390I CCNGG 7 cut(s) 111, 298, 419, 759, 771, 783, 891
Bme18I GGWCC 1 cut(s) 337
BmgT120I GGNCC 1 cut(s) 337
BmrFI CCNGG 7 cut(s) 111, 298, 419, 759, 771, 783, 891
BmsI GCATC 2 cut(s) 266, 940
BpiI GAAGAC 2 cut(s) 378, 406
BpmI CTGGAG 2 cut(s) 27, 801
BpuEI CTTGAG 1 cut(s) 205
BpuMI CCSGG 1 cut(s) 111
BsaAI YACGTR 1 cut(s) 410
BsaJI CCNNGG 1 cut(s) 393
BsaWI WCCGGW 1 cut(s) 203
Bsc4I CCNNNNNNNGG 2 cut(s) 38, 923
Bse1I ACTGG 2 cut(s) 220, 818
Bse21I CCTNAGG 2 cut(s) 377, 1074
Bse3DI GCAATG 1 cut(s) 738
BseBI CCWGG 6 cut(s) 298, 419, 759, 771, 783, 891
BseDI CCNNGG 1 cut(s) 393
BseGI GGATG 3 cut(s) 106, 716, 1132
BseLI CCNNNNNNNGG 2 cut(s) 38, 923
BseMI GCAATG 1 cut(s) 738
BseMII CTCAG 6 cut(s) 391, 686, 766, 846, 1049, 1088
BseNI ACTGG 2 cut(s) 220, 818
BseRI GAGGAG 4 cut(s) 52, 269, 872, 1062
BseSI GKGCMC 1 cut(s) 547
BseXI GCAGC 9 cut(s) 54, 283, 454, 691, 697, 737, 740, 981, 1033
BsgI GTGCAG 1 cut(s) 331
BshFI GGCC 4 cut(s) 453, 656, 737, 757
BsiSI CCGG 2 cut(s) 111, 204
BslI CCNNNNNNNGG 2 cut(s) 38, 923
BsmAI GTCTC 6 cut(s) 3, 130, 138, 423, 643, 854
BsmBI CGTCTC 1 cut(s) 3
BsnI GGCC 4 cut(s) 453, 656, 737, 757
Bsp1286I GDGCHC 1 cut(s) 547
Bsp143I GATC 2 cut(s) 177, 1024
BspACI CCGC 3 cut(s) 83, 556, 1086
BspANI GGCC 4 cut(s) 453, 656, 737, 757
BspCNI CTCAG 6 cut(s) 390, 685, 765, 847, 1048, 1087
BspMI ACCTGC 1 cut(s) 593
BspPI GGATC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 738
BsrI ACTGG 2 cut(s) 220, 818
BssECI CCNNGG 1 cut(s) 393
BssMI GATC 2 cut(s) 177, 1024
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 1 cut(s) 393
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 6 cut(s) 298, 419, 759, 771, 783, 891
Bst4CI ACNGT 1 cut(s) 523
Bst6I CTCTTC 1 cut(s) 672
BstBAI YACGTR 1 cut(s) 410
BstC8I GCNNGC 2 cut(s) 261, 489
BstDEI CTNAG 6 cut(s) 377, 672, 752, 855, 1035, 1074
BstF5I GGATG 3 cut(s) 106, 716, 1132
BstKTI GATC 2 cut(s) 180, 1027
BstMAI GTCTC 6 cut(s) 3, 130, 138, 423, 643, 854
BstMBI GATC 2 cut(s) 177, 1024
BstMWI GCNNNNNNNGC 6 cut(s) 51, 710, 734, 792, 1085, 1091
BstNI CCWGG 6 cut(s) 298, 419, 759, 771, 783, 891
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 7 cut(s) 109, 296, 417, 757, 769, 781, 889
BstSFI CTRYAG 1 cut(s) 1095
BstSLI GKGCMC 1 cut(s) 547
BstV1I GCAGC 9 cut(s) 54, 283, 454, 691, 697, 737, 740, 981, 1033
BstV2I GAAGAC 2 cut(s) 378, 406
BstX2I RGATCY 1 cut(s) 177
BstYI RGATCY 1 cut(s) 177
Bsu36I CCTNAGG 2 cut(s) 377, 1074
BsuRI GGCC 4 cut(s) 453, 656, 737, 757
BtgZI GCGATG 1 cut(s) 289
BtsCI GGATG 3 cut(s) 106, 716, 1132
BtsIMutI CAGTG 2 cut(s) 213, 528
BveI ACCTGC 1 cut(s) 593
Cac8I GCNNGC 2 cut(s) 261, 489
Cfr13I GGNCC 1 cut(s) 337
CsiI ACCWGGT 2 cut(s) 769, 889
Csp6I GTAC 2 cut(s) 534, 606
CviAII CATG 8 cut(s) 159, 172, 260, 286, 359, 568, 878, 965
CviQI GTAC 2 cut(s) 534, 606
DdeI CTNAG 6 cut(s) 377, 672, 752, 855, 1035, 1074
DpnI GATC 2 cut(s) 179, 1026
DpnII GATC 2 cut(s) 177, 1024
EaeI YGGCCR 1 cut(s) 735
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
Eco130I CCWWGG 1 cut(s) 393
Eco147I AGGCCT 1 cut(s) 656
Eco32I GATATC 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 337
Eco57I CTGAAG 4 cut(s) 648, 1041, 1079, 1092
Eco72I CACGTG 1 cut(s) 410
Eco81I CCTNAGG 2 cut(s) 377, 1074
EcoRII CCWGG 6 cut(s) 296, 417, 757, 769, 781, 889
EcoRV GATATC 1 cut(s) 16
EcoT14I CCWWGG 1 cut(s) 393
ErhI CCWWGG 1 cut(s) 393
Esp3I CGTCTC 1 cut(s) 3
FaeI CATG 8 cut(s) 162, 175, 263, 289, 362, 571, 881, 968
FalI AAGNNNNNCTT 2 cut(s) 990, 1022
FatI CATG 8 cut(s) 158, 171, 259, 285, 358, 567, 877, 964
FokI GGATG 3 cut(s) 93, 703, 1139
GsuI CTGGAG 2 cut(s) 27, 801
HaeIII GGCC 4 cut(s) 453, 656, 737, 757
HapII CCGG 2 cut(s) 111, 204
Hin1II CATG 8 cut(s) 162, 175, 263, 289, 362, 571, 881, 968
HinfI GANTC 7 cut(s) 71, 207, 301, 332, 593, 631, 1054
HpaII CCGG 2 cut(s) 111, 204
Hpy188I TCNGA 5 cut(s) 25, 67, 103, 958, 1059
Hpy188III TCNNGA 4 cut(s) 244, 314, 674, 1110
HpyAV CCTTC 2 cut(s) 651, 990
HpyCH4III ACNGT 1 cut(s) 523
HpyCH4IV ACGT 1 cut(s) 409
HpyF10VI GCNNNNNNNGC 6 cut(s) 51, 710, 734, 792, 1085, 1091
HpyF3I CTNAG 6 cut(s) 377, 672, 752, 855, 1035, 1074
HpySE526I ACGT 1 cut(s) 409
Hsp92II CATG 8 cut(s) 162, 175, 263, 289, 362, 571, 881, 968
Kzo9I GATC 2 cut(s) 177, 1024
LmnI GCTCC 3 cut(s) 256, 718, 991
Lsp1109I GCAGC 9 cut(s) 54, 283, 454, 691, 697, 737, 740, 981, 1033
LweI GCATC 2 cut(s) 266, 940
MabI ACCWGGT 2 cut(s) 769, 889
MaeII ACGT 1 cut(s) 409
MaeIII GTNAC 6 cut(s) 667, 743, 773, 836, 866, 1000
MalI GATC 2 cut(s) 179, 1026
MboI GATC 2 cut(s) 177, 1024
MboII GAAGA 4 cut(s) 383, 406, 689, 1034
MfeI CAATTG 1 cut(s) 455
MflI RGATCY 1 cut(s) 177
MhlI GDGCHC 1 cut(s) 547
MlsI TGGCCA 1 cut(s) 737
MluCI AATT 9 cut(s) 134, 148, 307, 363, 455, 529, 572, 618, 842
MluNI TGGCCA 1 cut(s) 737
Mox20I TGGCCA 1 cut(s) 737
MscI TGGCCA 1 cut(s) 737
MseI TTAA 1 cut(s) 987
MslI CAYNNNNRTG 1 cut(s) 948
Msp20I TGGCCA 1 cut(s) 737
MspI CCGG 2 cut(s) 111, 204
MspR9I CCNGG 7 cut(s) 111, 298, 419, 759, 771, 783, 891
MunI CAATTG 1 cut(s) 455
MvaI CCWGG 6 cut(s) 298, 419, 759, 771, 783, 891
MwoI GCNNNNNNNGC 6 cut(s) 51, 710, 734, 792, 1085, 1091
NciI CCSGG 1 cut(s) 111
NdeII GATC 2 cut(s) 177, 1024
NlaIII CATG 8 cut(s) 162, 175, 263, 289, 362, 571, 881, 968
NmuCI GTSAC 2 cut(s) 866, 1000
NspI RCATGY 1 cut(s) 263
PaeI GCATGC 1 cut(s) 263
PceI AGGCCT 1 cut(s) 656
PfeI GAWTC 7 cut(s) 71, 207, 301, 332, 593, 631, 1054
PflFI GACNNNGTC 1 cut(s) 287
PfoI TCCNGGA 1 cut(s) 296
PmaCI CACGTG 1 cut(s) 410
PmlI CACGTG 1 cut(s) 410
Ppu21I YACGTR 1 cut(s) 410
Psp6I CCWGG 6 cut(s) 296, 417, 757, 769, 781, 889
PspCI CACGTG 1 cut(s) 410
PspGI CCWGG 6 cut(s) 296, 417, 757, 769, 781, 889
PspPI GGNCC 1 cut(s) 337
PsuI RGATCY 1 cut(s) 177
PsyI GACNNNGTC 1 cut(s) 287
RsaI GTAC 2 cut(s) 535, 607
RsaNI GTAC 2 cut(s) 534, 606
RseI CAYNNNNRTG 1 cut(s) 948
SaqAI TTAA 1 cut(s) 987
Sau3AI GATC 2 cut(s) 177, 1024
Sau96I GGNCC 1 cut(s) 337
ScrFI CCNGG 7 cut(s) 111, 298, 419, 759, 771, 783, 891
SduI GDGCHC 1 cut(s) 547
SexAI ACCWGGT 2 cut(s) 769, 889
SfaNI GCATC 2 cut(s) 266, 940
SfcI CTRYAG 1 cut(s) 1095
SinI GGWCC 1 cut(s) 337
SmiMI CAYNNNNRTG 1 cut(s) 948
SmlI CTYRAG 1 cut(s) 184
SmoI CTYRAG 1 cut(s) 184
SphI GCATGC 1 cut(s) 263
Sse9I AATT 9 cut(s) 134, 148, 307, 363, 455, 529, 572, 618, 842
SseBI AGGCCT 1 cut(s) 656
SsiI CCGC 3 cut(s) 83, 556, 1086
StuI AGGCCT 1 cut(s) 656
StyD4I CCNGG 7 cut(s) 109, 296, 417, 757, 769, 781, 889
StyI CCWWGG 1 cut(s) 393
TaaI ACNGT 1 cut(s) 523
TaiI ACGT 1 cut(s) 412
TaqI TCGA 1 cut(s) 931
TaqII GACCGA 1 cut(s) 325
TasI AATT 9 cut(s) 134, 148, 307, 363, 455, 529, 572, 618, 842
TatI WGTACW 1 cut(s) 533
TauI GCSGC 1 cut(s) 1088
TfiI GAWTC 7 cut(s) 71, 207, 301, 332, 593, 631, 1054
Tru1I TTAA 1 cut(s) 987
Tru9I TTAA 1 cut(s) 987
TscAI CASTG 2 cut(s) 220, 528
TseFI GTSAC 2 cut(s) 866, 1000
TseI GCWGC 9 cut(s) 42, 271, 467, 685, 704, 725, 728, 994, 1046
Tsp45I GTSAC 2 cut(s) 866, 1000
TspDTI ATGAA 6 cut(s) 84, 199, 516, 606, 644, 972
TspRI CASTG 2 cut(s) 220, 528
Tth111I GACNNNGTC 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 337
XapI RAATTY 2 cut(s) 618, 842
XceI RCATGY 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.