Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 256 |
| AcoI | YGGCCR | 1 cut(s) | 159 |
| AfaI | GTAC | 1 cut(s) | 145 |
| AgsI | TTSAA | 2 cut(s) | 22, 75 |
| AluBI | AGCT | 2 cut(s) | 170, 252 |
| AluI | AGCT | 2 cut(s) | 170, 252 |
| Ama87I | CYCGRG | 1 cut(s) | 181 |
| AoxI | GGCC | 1 cut(s) | 159 |
| ApeKI | GCWGC | 1 cut(s) | 249 |
| AspA2I | CCTAGG | 1 cut(s) | 310 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| AvaI | CYCGRG | 1 cut(s) | 181 |
| AvrII | CCTAGG | 1 cut(s) | 310 |
| BalI | TGGCCA | 1 cut(s) | 161 |
| BauI | CACGAG | 1 cut(s) | 138 |
| BbsI | GAAGAC | 1 cut(s) | 195 |
| BbvI | GCAGC | 1 cut(s) | 261 |
| BccI | CCATC | 1 cut(s) | 7 |
| BfaI | CTAG | 1 cut(s) | 311 |
| BisI | GCNGC | 1 cut(s) | 250 |
| BlnI | CCTAGG | 1 cut(s) | 310 |
| BlsI | GCNGC | 1 cut(s) | 251 |
| BmeT110I | CYCGRG | 1 cut(s) | 181 |
| BpiI | GAAGAC | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 310 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 39, 69 |
| BseDI | CCNNGG | 1 cut(s) | 310 |
| BseRI | GAGGAG | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 261 |
| BshFI | GGCC | 1 cut(s) | 161 |
| BsiHKCI | CYCGRG | 1 cut(s) | 181 |
| BslFI | GGGAC | 1 cut(s) | 60 |
| BsmFI | GGGAC | 1 cut(s) | 60 |
| BsnI | GGCC | 1 cut(s) | 161 |
| BsoBI | CYCGRG | 1 cut(s) | 181 |
| BspACI | CCGC | 1 cut(s) | 256 |
| BspANI | GGCC | 1 cut(s) | 161 |
| BspHI | TCATGA | 1 cut(s) | 60 |
| BssECI | CCNNGG | 1 cut(s) | 310 |
| BssSI | CACGAG | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 1 cut(s) | 310 |
| Bst2BI | CACGAG | 1 cut(s) | 138 |
| Bst4CI | ACNGT | 2 cut(s) | 79, 277 |
| BstDEI | CTNAG | 1 cut(s) | 197 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 255 |
| BstV1I | GCAGC | 1 cut(s) | 261 |
| BstV2I | GAAGAC | 1 cut(s) | 195 |
| BsuRI | GGCC | 1 cut(s) | 161 |
| CciI | TCATGA | 1 cut(s) | 60 |
| Csp6I | GTAC | 1 cut(s) | 144 |
| CviAII | CATG | 3 cut(s) | 61, 157, 163 |
| CviJI | RGCY | 3 cut(s) | 161, 170, 252 |
| CviKI_1 | RGCY | 3 cut(s) | 161, 170, 252 |
| CviQI | GTAC | 1 cut(s) | 144 |
| DdeI | CTNAG | 1 cut(s) | 197 |
| EaeI | YGGCCR | 1 cut(s) | 159 |
| Eco130I | CCWWGG | 1 cut(s) | 310 |
| Eco88I | CYCGRG | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 310 |
| ErhI | CCWWGG | 1 cut(s) | 310 |
| FaeI | CATG | 3 cut(s) | 64, 160, 166 |
| FaqI | GGGAC | 1 cut(s) | 60 |
| FatI | CATG | 3 cut(s) | 60, 156, 162 |
| FauNDI | CATATG | 1 cut(s) | 31 |
| Fnu4HI | GCNGC | 1 cut(s) | 250 |
| Fsp4HI | GCNGC | 1 cut(s) | 250 |
| FspBI | CTAG | 1 cut(s) | 311 |
| GluI | GCNGC | 1 cut(s) | 250 |
| HaeIII | GGCC | 1 cut(s) | 161 |
| Hin1II | CATG | 3 cut(s) | 64, 160, 166 |
| HinfI | GANTC | 3 cut(s) | 26, 64, 191 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 2 cut(s) | 61, 227 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 2 cut(s) | 79, 277 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 35, 249 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 255 |
| HpyF3I | CTNAG | 1 cut(s) | 197 |
| Hsp92II | CATG | 3 cut(s) | 64, 160, 166 |
| Lsp1109I | GCAGC | 1 cut(s) | 261 |
| MaeI | CTAG | 1 cut(s) | 311 |
| MboII | GAAGA | 4 cut(s) | 59, 122, 163, 200 |
| MlsI | TGGCCA | 1 cut(s) | 161 |
| MluCI | AATT | 2 cut(s) | 5, 211 |
| MluNI | TGGCCA | 1 cut(s) | 161 |
| MlyI | GAGTC | 2 cut(s) | 20, 185 |
| MnlI | CCTC | 2 cut(s) | 65, 68 |
| Mox20I | TGGCCA | 1 cut(s) | 161 |
| MscI | TGGCCA | 1 cut(s) | 161 |
| MseI | TTAA | 1 cut(s) | 81 |
| MslI | CAYNNNNRTG | 1 cut(s) | 161 |
| Msp20I | TGGCCA | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 255 |
| NdeI | CATATG | 1 cut(s) | 31 |
| NlaIII | CATG | 3 cut(s) | 64, 160, 166 |
| PagI | TCATGA | 1 cut(s) | 60 |
| PfeI | GAWTC | 1 cut(s) | 64 |
| PkrI | GCNGC | 1 cut(s) | 251 |
| PleI | GAGTC | 2 cut(s) | 20, 185 |
| PpsI | GAGTC | 2 cut(s) | 20, 185 |
| RsaI | GTAC | 1 cut(s) | 145 |
| RsaNI | GTAC | 1 cut(s) | 144 |
| RseI | CAYNNNNRTG | 1 cut(s) | 161 |
| SaqAI | TTAA | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 250 |
| SchI | GAGTC | 2 cut(s) | 20, 185 |
| SetI | ASST | 3 cut(s) | 172, 254, 316 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 161 |
| SmlI | CTYRAG | 1 cut(s) | 225 |
| SmoI | CTYRAG | 1 cut(s) | 225 |
| Sse9I | AATT | 2 cut(s) | 5, 211 |
| SsiI | CCGC | 1 cut(s) | 256 |
| SspMI | CTAG | 1 cut(s) | 311 |
| StyI | CCWWGG | 1 cut(s) | 310 |
| TaaI | ACNGT | 2 cut(s) | 79, 277 |
| TasI | AATT | 2 cut(s) | 5, 211 |
| TfiI | GAWTC | 1 cut(s) | 64 |
| Tru1I | TTAA | 1 cut(s) | 81 |
| Tru9I | TTAA | 1 cut(s) | 81 |
| TseI | GCWGC | 1 cut(s) | 249 |
| TspDTI | ATGAA | 3 cut(s) | 77, 164, 279 |
| XmaJI | CCTAGG | 1 cut(s) | 310 |
| XspI | CTAG | 1 cut(s) | 311 |