Rw7G019180

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000106
Physical Location & Seq
Forward (+)
21069369 .. 21071303
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019180.1

Sequence Viewer

Length: 1524 bp
ATGCGAGAGAATGTGATTACTGAAAAAATCTTGAGATCCATGGTCTCCAGGTTTGACTATGTGGTGTGTTCGATTGAAGAATCAAATAACCTGGAGACAATGAAAATTGACGAGTTGCAGAGTAGCCTCCTCGTCCATGAGCAGAGAATGAAGAGTCATGATGAAGAAGAACATGTGCTGAAGGTCTCTCATGAAGATAGAGCAGGAAGAGGCAGAGGAAGAACTACTTATAGAGGAGGCCGAGGTAGAGGTAGAGTGAGACAACCTTTCAATAAAGCAGTAGTTGAATGTTTCAATTGTCACAAGTTGGGACATTATCAATATGAATGTCCTGACTGGGAAAAAAGGGCCAATTATGCTGAACTCAATGAAGAGGATGAGCTCCTTCTAATGTCCTATGTTGAGCTCAATAATTCAACAAGGGAGGAATGGTTCGTGGATCTGGATGAACAATTCAGGCACTCAGTGAAGCTTGGGAATGACTTCAGGATGCCGGTGATGGGAAGAGGCAACATCAGACTCGATGTAGGAGGTGTAACTCAGGTAGTTTCGGATGTGTACTATATACCTGAGTTAAAAAATAACCTTTTGAGTATTGGTCAGCTGCAAGAGAAGGGGTTGGCTATTTTGATTCGAAATGGAGAATGCAGAATCTATCACTCTAAGAGGGGGCTCATTATGCATACACATATGACTTCCAACAGAATGTTCGTTCTGATTGCAAACATGAAACCACAATCTTCACCATGTTTGAATGTAGCTTCTGAGAACATCTCCGAGCTGTGGCATCGAAGATATGGACACCTGAATCACAAGAACCTGAGAATCTTGCAGTACAAAAAGCTAGTAAAGGGGCTGCCTCAACTCAATGTTTCAACCAAAATGTCCTACACACCCCAACAAAACGGGGTTGCAGAGCACAAAAATCGTACCATAATGAATATGGTTCGATGTTTGCTCTCTGAAAAAGAGATGCCTAAGCCATTTTGGCCGGAAGCGGTGAGATGGTCTGTTCATGTGCTTAACCGAAGCCCAACTGTGGCGGTGAAGGATAAAACACCAGAGGAAAGTTGGAGTGGAGTAAAACCTAGTGTGGAGCATTTCAGAGTCTTCGGCTGTATAGGGTATGTTCATATTCCAGATGTAAAAAGAGTGAAGTTAGATGACAAAAGCCATAAATGTGTATTGATTGGTGTAAGTGAAGAGTCAAAGGCCTACAAGCTCTATGACCCGGTGACAAAGAAAGTGGTGGTTAGCCGAGATGTGCAGTTTAATGAAAATGAAAGCTGGAATTGGGGGAGGAGTGAAGATGAGGTCAAGGCCGATGTTCTGGAATGGGGTGAGAGTGAATTCAGTGATGCAGATGACGGTGAAAGTGAAAGTGAAGAAGACCAACAAAATGAAGAACCTAATTCTAATGAGAGTTCTGGAACAAGCACAGGTTCTGGAGCAAGCACACCAAGTTCATCTGAACAAAATGCATCAGACTTACCTGAAACAAGAAATATGAGGCAGCCCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag gag_pre-integrs rve zf-CCHC

Protein Analysis

507

Amino Acids

58.33

Weight (kDa)

6.18

Isoelectric Point (pI)

57.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 141 - 206 7.4e-17 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 237 - 290 3.6e-09 GAG-pre-integrase domain
SH3_retrovirus PF25597 373 - 436 1.1e-26 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 998, 1043
AclWI GGATC 2 cut(s) 30, 447
AcoI YGGCCR 1 cut(s) 989
AcsI RAATTY 1 cut(s) 1349
AcuI CTGAAG 2 cut(s) 200, 469
AdeI CACNNNGTG 1 cut(s) 466
AfaI GTAC 3 cut(s) 560, 836, 931
AfiI CCNNNNNNNGG 3 cut(s) 500, 783, 1039
AflIII ACRYGT 1 cut(s) 172
AgsI TTSAA 7 cut(s) 77, 271, 287, 295, 417, 754, 876
AjnI CCWGG 2 cut(s) 47, 90
AjuI GAANNNNNNNTTGG 2 cut(s) 692, 724
AloI GAACNNNNNNTCC 2 cut(s) 416, 448
AluBI AGCT 9 cut(s) 382, 406, 472, 604, 761, 781, 844, 1222, 1287
AluI AGCT 9 cut(s) 382, 406, 472, 604, 761, 781, 844, 1222, 1287
Alw21I GWGCWC 3 cut(s) 384, 408, 921
Alw26I GTCTC 4 cut(s) 49, 89, 190, 253
AlwI GGATC 2 cut(s) 30, 447
AlwNI CAGNNNCTG 1 cut(s) 1445
AoxI GGCC 5 cut(s) 238, 348, 989, 1212, 1320
ApeKI GCWGC 3 cut(s) 604, 856, 1513
ApoI RAATTY 1 cut(s) 1349
Asp700I GAANNNNTTC 1 cut(s) 482
AspS9I GGNCC 1 cut(s) 348
AsuC2I CCSGG 1 cut(s) 1232
AsuHPI GGTGA 7 cut(s) 508, 735, 1012, 1057, 1246, 1352, 1382
AsuII TTCGAA 1 cut(s) 634
BanII GRGCYC 3 cut(s) 384, 408, 675
BbsI GAAGAC 2 cut(s) 1102, 1395
Bbv12I GWGCWC 3 cut(s) 384, 408, 921
BbvI GCAGC 2 cut(s) 591, 843
BccI CCATC 2 cut(s) 493, 999
BcgI CGANNNNNNTGC 2 cut(s) 908, 942
BciT130I CCWGG 2 cut(s) 49, 92
BcnI CCSGG 1 cut(s) 1232
BcoDI GTCTC 4 cut(s) 49, 89, 190, 253
BfaI CTAG 2 cut(s) 845, 1089
BglI GCCNNNNNGGC 1 cut(s) 988
BisI GCNGC 3 cut(s) 605, 857, 1514
BlsI GCNGC 3 cut(s) 606, 858, 1515
Bme1390I CCNGG 3 cut(s) 49, 92, 1232
BmgT120I GGNCC 1 cut(s) 348
BmrFI CCNGG 3 cut(s) 49, 92, 1232
BmrI ACTGGG 1 cut(s) 346
BmsI GCATC 5 cut(s) 480, 796, 963, 1348, 1490
BmuI ACTGGG 1 cut(s) 346
BpiI GAAGAC 2 cut(s) 1102, 1395
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 3 cut(s) 31, 113, 1467
Bpu10I CCTNAGC 1 cut(s) 978
Bpu14I TTCGAA 1 cut(s) 634
BpuEI CTTGAG 1 cut(s) 52
BpuMI CCSGG 1 cut(s) 1232
BsaI GGTCTC 2 cut(s) 49, 190
BsaJI CCNNGG 2 cut(s) 39, 241
BsaXI ACNNNNNCTCC 2 cut(s) 416, 446
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 783, 1039
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 1 cut(s) 341
BseBI CCWGG 2 cut(s) 49, 92
BseDI CCNNGG 2 cut(s) 39, 241
BseGI GGATG 4 cut(s) 382, 451, 495, 559
BseLI CCNNNNNNNGG 3 cut(s) 500, 783, 1039
BseMII CTCAG 5 cut(s) 477, 554, 561, 756, 812
BseNI ACTGG 1 cut(s) 341
BseRI GAGGAG 3 cut(s) 119, 249, 1315
BseXI GCAGC 2 cut(s) 591, 843
BsgI GTGCAG 1 cut(s) 1286
BshFI GGCC 5 cut(s) 240, 350, 991, 1214, 1322
BsiHKAI GWGCWC 3 cut(s) 384, 408, 921
BsiSI CCGG 3 cut(s) 494, 992, 1232
BslFI GGGAC 1 cut(s) 324
BslI CCNNNNNNNGG 3 cut(s) 500, 783, 1039
BsmAI GTCTC 4 cut(s) 49, 89, 190, 253
BsmFI GGGAC 1 cut(s) 324
BsmI GAATGC 1 cut(s) 650
BsnI GGCC 5 cut(s) 240, 350, 991, 1214, 1322
Bso31I GGTCTC 2 cut(s) 49, 190
Bsp119I TTCGAA 1 cut(s) 634
Bsp1286I GDGCHC 4 cut(s) 384, 408, 675, 921
Bsp143I GATC 2 cut(s) 35, 439
Bsp19I CCATGG 1 cut(s) 39
BspACI CCGC 2 cut(s) 998, 1043
BspANI GGCC 5 cut(s) 240, 350, 991, 1214, 1322
BspCNI CTCAG 5 cut(s) 476, 553, 562, 757, 813
BspHI TCATGA 2 cut(s) 157, 190
BspPI GGATC 2 cut(s) 30, 447
BspT104I TTCGAA 1 cut(s) 634
BspTNI GGTCTC 2 cut(s) 49, 190
BsrFI RCCGGY 1 cut(s) 493
BsrI ACTGG 1 cut(s) 341
BssAI RCCGGY 1 cut(s) 493
BssECI CCNNGG 2 cut(s) 39, 241
BssMI GATC 2 cut(s) 35, 439
BssT1I CCWWGG 1 cut(s) 39
Bst2UI CCWGG 2 cut(s) 49, 92
Bst4CI ACNGT 2 cut(s) 1039, 1370
Bst6I CTCTTC 5 cut(s) 146, 202, 366, 499, 1197
BstBI TTCGAA 1 cut(s) 634
BstC8I GCNNGC 1 cut(s) 1453
BstDEI CTNAG 7 cut(s) 463, 540, 570, 663, 765, 821, 978
BstDSI CCRYGG 1 cut(s) 39
BstF5I GGATG 4 cut(s) 382, 451, 495, 559
BstKTI GATC 2 cut(s) 38, 442
BstMAI GTCTC 4 cut(s) 49, 89, 190, 253
BstMBI GATC 2 cut(s) 35, 439
BstMWI GCNNNNNNNGC 3 cut(s) 356, 679, 988
BstNI CCWGG 2 cut(s) 49, 92
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 3 cut(s) 47, 90, 1230
BstV1I GCAGC 2 cut(s) 591, 843
BstV2I GAAGAC 2 cut(s) 1102, 1395
BstX2I RGATCY 2 cut(s) 35, 439
BstYI RGATCY 2 cut(s) 35, 439
BsuRI GGCC 5 cut(s) 240, 350, 991, 1214, 1322
BtgI CCRYGG 1 cut(s) 39
BtsCI GGATG 4 cut(s) 382, 451, 495, 559
BtsIMutI CAGTG 2 cut(s) 471, 1360
Cac8I GCNNGC 1 cut(s) 1453
CaiI CAGNNNCTG 1 cut(s) 1445
CciI TCATGA 2 cut(s) 157, 190
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 1 cut(s) 348
Csp6I GTAC 3 cut(s) 559, 835, 930
CspCI CAANNNNNGTGG 2 cut(s) 1227, 1262
CviAII CATG 8 cut(s) 40, 137, 158, 173, 191, 727, 747, 1016
CviQI GTAC 3 cut(s) 559, 835, 930
DdeI CTNAG 7 cut(s) 463, 540, 570, 663, 765, 821, 978
DpnI GATC 2 cut(s) 37, 441
DpnII GATC 2 cut(s) 35, 439
DraIII CACNNNGTG 1 cut(s) 466
EaeI YGGCCR 1 cut(s) 989
Eam1104I CTCTTC 5 cut(s) 146, 202, 366, 499, 1197
EarI CTCTTC 5 cut(s) 146, 202, 366, 499, 1197
Ecl136II GAGCTC 2 cut(s) 382, 406
Eco130I CCWWGG 1 cut(s) 39
Eco147I AGGCCT 1 cut(s) 1214
Eco24I GRGCYC 3 cut(s) 384, 408, 675
Eco31I GGTCTC 2 cut(s) 49, 190
Eco53kI GAGCTC 2 cut(s) 382, 406
Eco57I CTGAAG 2 cut(s) 200, 469
EcoICRI GAGCTC 2 cut(s) 382, 406
EcoRI GAATTC 1 cut(s) 1349
EcoRII CCWGG 2 cut(s) 47, 90
EcoT14I CCWWGG 1 cut(s) 39
EcoT22I ATGCAT 2 cut(s) 684, 1483
EcoT38I GRGCYC 3 cut(s) 384, 408, 675
ErhI CCWWGG 1 cut(s) 39
FaeI CATG 8 cut(s) 43, 140, 161, 176, 194, 730, 750, 1019
FalI AAGNNNNNCTT 2 cut(s) 211, 243
FaqI GGGAC 1 cut(s) 324
FatI CATG 8 cut(s) 39, 136, 157, 172, 190, 726, 746, 1015
FauNDI CATATG 1 cut(s) 690
Fnu4HI GCNGC 3 cut(s) 605, 857, 1514
FokI GGATG 4 cut(s) 389, 458, 502, 566
FriOI GRGCYC 3 cut(s) 384, 408, 675
Fsp4HI GCNGC 3 cut(s) 605, 857, 1514
FspBI CTAG 2 cut(s) 845, 1089
GluI GCNGC 3 cut(s) 605, 857, 1514
GsuI CTGGAG 3 cut(s) 31, 113, 1467
HaeIII GGCC 5 cut(s) 240, 350, 991, 1214, 1322
HapII CCGG 3 cut(s) 494, 992, 1232
Hin1II CATG 8 cut(s) 43, 140, 161, 176, 194, 730, 750, 1019
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 9 cut(s) 80, 154, 519, 631, 651, 808, 825, 1107, 1205
HpaII CCGG 3 cut(s) 494, 992, 1232
HphI GGTGA 7 cut(s) 508, 735, 1012, 1057, 1246, 1352, 1382
Hpy166II GTNNAC 1 cut(s) 559
Hpy188I TCNGA 9 cut(s) 518, 553, 717, 766, 778, 964, 1106, 1471, 1486
Hpy8I GTNNAC 1 cut(s) 559
HpyAV CCTTC 4 cut(s) 175, 395, 607, 1042
HpyCH4III ACNGT 2 cut(s) 1039, 1370
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 679, 988
HpyF3I CTNAG 7 cut(s) 463, 540, 570, 663, 765, 821, 978
Hsp92II CATG 8 cut(s) 43, 140, 161, 176, 194, 730, 750, 1019
Kzo9I GATC 2 cut(s) 35, 439
LmnI GCTCC 3 cut(s) 387, 1096, 1448
Lsp1109I GCAGC 2 cut(s) 591, 843
LweI GCATC 5 cut(s) 480, 796, 963, 1348, 1490
MaeI CTAG 2 cut(s) 845, 1089
MaeIII GTNAC 3 cut(s) 299, 535, 1234
MalI GATC 2 cut(s) 37, 441
MboI GATC 2 cut(s) 35, 439
MfeI CAATTG 1 cut(s) 295
MflI RGATCY 2 cut(s) 35, 439
MhlI GDGCHC 4 cut(s) 384, 408, 675, 921
MluCI AATT 8 cut(s) 105, 295, 352, 412, 452, 1291, 1349, 1411
MlyI GAGTC 4 cut(s) 163, 513, 1116, 1214
MmeI TCCRAC 2 cut(s) 723, 1052
Mph1103I ATGCAT 2 cut(s) 684, 1483
MroXI GAANNNNTTC 1 cut(s) 482
MseI TTAA 3 cut(s) 575, 1023, 1272
MslI CAYNNNNRTG 1 cut(s) 1179
MspA1I CMGCKG 1 cut(s) 604
MspI CCGG 3 cut(s) 494, 992, 1232
MspR9I CCNGG 3 cut(s) 49, 92, 1232
MunI CAATTG 1 cut(s) 295
Mva1269I GAATGC 1 cut(s) 650
MvaI CCWGG 2 cut(s) 49, 92
MwoI GCNNNNNNNGC 3 cut(s) 356, 679, 988
NciI CCSGG 1 cut(s) 1232
NcoI CCATGG 1 cut(s) 39
NdeI CATATG 1 cut(s) 690
NdeII GATC 2 cut(s) 35, 439
NlaIII CATG 8 cut(s) 43, 140, 161, 176, 194, 730, 750, 1019
NmeAIII GCCGAG 2 cut(s) 266, 1283
NmuCI GTSAC 2 cut(s) 299, 1234
NsiI ATGCAT 2 cut(s) 684, 1483
NspI RCATGY 1 cut(s) 176
NspV TTCGAA 1 cut(s) 634
PagI TCATGA 2 cut(s) 157, 190
PceI AGGCCT 1 cut(s) 1214
PciI ACATGT 1 cut(s) 172
PctI GAATGC 1 cut(s) 650
PdmI GAANNNNTTC 1 cut(s) 482
PfeI GAWTC 5 cut(s) 80, 631, 651, 808, 825
PkrI GCNGC 3 cut(s) 606, 858, 1515
PleI GAGTC 4 cut(s) 162, 513, 1115, 1213
PpsI GAGTC 4 cut(s) 162, 513, 1115, 1213
PscI ACATGT 1 cut(s) 172
Psp124BI GAGCTC 2 cut(s) 384, 408
Psp6I CCWGG 2 cut(s) 47, 90
PspGI CCWGG 2 cut(s) 47, 90
PspPI GGNCC 1 cut(s) 348
PstNI CAGNNNCTG 1 cut(s) 1445
PsuI RGATCY 2 cut(s) 35, 439
PvuII CAGCTG 1 cut(s) 604
RsaI GTAC 3 cut(s) 560, 836, 931
RsaNI GTAC 3 cut(s) 559, 835, 930
RseI CAYNNNNRTG 1 cut(s) 1179
SacI GAGCTC 2 cut(s) 384, 408
SaqAI TTAA 3 cut(s) 575, 1023, 1272
SatI GCNGC 3 cut(s) 605, 857, 1514
Sau3AI GATC 2 cut(s) 35, 439
Sau96I GGNCC 1 cut(s) 348
SchI GAGTC 4 cut(s) 163, 513, 1116, 1214
ScrFI CCNGG 3 cut(s) 49, 92, 1232
SduI GDGCHC 4 cut(s) 384, 408, 675, 921
SfaNI GCATC 5 cut(s) 480, 796, 963, 1348, 1490
SfuI TTCGAA 1 cut(s) 634
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 1 cut(s) 31
SmoI CTYRAG 1 cut(s) 31
Sse9I AATT 8 cut(s) 105, 295, 352, 412, 452, 1291, 1349, 1411
SseBI AGGCCT 1 cut(s) 1214
SsiI CCGC 2 cut(s) 998, 1043
SspMI CTAG 2 cut(s) 845, 1089
SstI GAGCTC 2 cut(s) 384, 408
StuI AGGCCT 1 cut(s) 1214
StyD4I CCNGG 3 cut(s) 47, 90, 1230
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 2 cut(s) 1039, 1370
TaqI TCGA 5 cut(s) 71, 522, 634, 790, 949
TasI AATT 8 cut(s) 105, 295, 352, 412, 452, 1291, 1349, 1411
TatI WGTACW 2 cut(s) 558, 834
TfiI GAWTC 5 cut(s) 80, 631, 651, 808, 825
Tru1I TTAA 3 cut(s) 575, 1023, 1272
Tru9I TTAA 3 cut(s) 575, 1023, 1272
TscAI CASTG 2 cut(s) 471, 1360
TseFI GTSAC 2 cut(s) 299, 1234
TseI GCWGC 3 cut(s) 604, 856, 1513
Tsp45I GTSAC 2 cut(s) 299, 1234
TspRI CASTG 2 cut(s) 471, 1360
XapI RAATTY 1 cut(s) 1349
XceI RCATGY 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 2 cut(s) 940, 1068
XmnI GAANNNNTTC 1 cut(s) 482
XspI CTAG 2 cut(s) 845, 1089
Zsp2I ATGCAT 2 cut(s) 684, 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.