FvH4_4g15061
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000106
Physical Location & Seq
Forward (+)
18645967 .. 18646959
993 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15061.t1

Sequence Viewer

Length: 993 bp
ATGTACATCTTCATCGGGTATCCTGTTGGTCAGAAACCCTATAAACTTTACGATCTCTCAAGTCATAAAGTTTTTACAAGTCGTGATGTAATCTTTCATGAGAATATCTTTCCATATCACTCTGTTGTACCCAAGTCCAATTCTTGTCCAATTCTTCCTCTAGCCCACATCACTGGCCCAACTAGTCCACCCACTCTCTCACAAAACCAGTCAAGTCCAACTCATCCTTCCTCTCTTCAATCGGGTCAACCCATCCTTCAGTCTGCTCTGCCTCTTCCCGAGTCAGAATTGCGTCCACCGCCTAGTCCTCTCCGGCGCGCCGTCGCTCTGCCAGTCCAACCACCGTCCGGTTCTTCTCCGTCTTCCTCCCCTAACCACATCACCCTTCGAACCTATGCCCGTCGTCCGCCACCTTCAGCACCACCAAAGGGTTTTGAATCTTCGCCGTCTCTTTCCGGCGTCGCCTCGCCACCTTCTGGCTCACCTAATCCCGATCCACCACAGGGCGGTCCTCCACCTATTTCGCCTCCATCTCAGTCTATTTCCAATCAGCCCGCTGCCGTCTCTAATACTGAGCCTCACCATCTCTTTCCGGCGTCCCAGTCTGCTGCCACGCCACAGCCAAATATTCCAGAGCCATCACCACCACTTCCAGACCCGCAACCATCCATCACTGACCAACAAGATCAGCCTCTCCGTCGTTCTACCCGGCCAACTGTTCCTTCAGTCAAATTGCGTGACTACATCTGCTCCCAGGTGACCTCTACTTTCCCAAACTCGTCGTCTTCTCCATCTCCAGGTTCTGTTAACGGTACTCGCTATCCTTTGTCTAATTTTTTATCGTACCATCGATATACACCTGCGCATCGTGCTTTTACTGCTCAGATTACACAGGATATTGAGCCACGTAGCTATGCCGAAGCAGTTACTAATCTAGAATGGCAAGCTGCCATGCATTCTGAATTACAAGCATTAGAGGATAATAATACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

331

Amino Acids

35.51

Weight (kDa)

7.87

Isoelectric Point (pI)

102.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_retrovirus PF25597 2 - 41 4.2e-13 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 868
Acc16I TGCGCA 1 cut(s) 864
Acc36I ACCTGC 1 cut(s) 868
AccB7I CCANNNNNTGG 1 cut(s) 476
AccII CGCG 1 cut(s) 318
AciI CCGC 5 cut(s) 299, 407, 507, 555, 659
AclWI GGATC 1 cut(s) 488
AcoI YGGCCR 1 cut(s) 710
AcuI CTGAAG 3 cut(s) 242, 399, 708
AcyI GRCGYC 2 cut(s) 459, 596
AfaI GTAC 4 cut(s) 5, 129, 814, 845
AfiI CCNNNNNNNGG 6 cut(s) 347, 428, 476, 503, 506, 797
AgsI TTSAA 2 cut(s) 239, 437
AhlI ACTAGT 1 cut(s) 182
AjnI CCWGG 2 cut(s) 753, 796
AjuI GAANNNNNNNTTGG 4 cut(s) 211, 243, 706, 738
AluBI AGCT 2 cut(s) 912, 947
AluI AGCT 2 cut(s) 912, 947
Alw26I GTCTC 2 cut(s) 453, 568
AlwI GGATC 1 cut(s) 488
AlwNI CAGNNNCTG 1 cut(s) 803
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 2 cut(s) 175, 710
ApeKI GCWGC 3 cut(s) 557, 608, 947
ArsI GACNNNNNNTTYG 2 cut(s) 767, 799
AscI GGCGCGCC 1 cut(s) 316
AspLEI GCGC 3 cut(s) 318, 320, 865
AspS9I GGNCC 2 cut(s) 176, 509
AsuC2I CCSGG 1 cut(s) 709
AsuHPI GGTGA 5 cut(s) 373, 474, 572, 633, 769
AsuII TTCGAA 1 cut(s) 388
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 1 cut(s) 509
BbsI GAAGAC 2 cut(s) 354, 777
BbvI GCAGC 3 cut(s) 544, 595, 934
BccI CCATC 8 cut(s) 260, 538, 591, 646, 673, 677, 799, 855
BceAI ACGGC 3 cut(s) 305, 430, 545
BciT130I CCWGG 2 cut(s) 755, 798
BciVI GTATCC 1 cut(s) 30
BcnI CCSGG 1 cut(s) 709
BcoDI GTCTC 2 cut(s) 453, 568
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 5 cut(s) 161, 183, 303, 935, 991
BfuAI ACCTGC 1 cut(s) 868
BfuI GTATCC 1 cut(s) 30
BisI GCNGC 3 cut(s) 558, 609, 948
BlsI GCNGC 3 cut(s) 559, 610, 949
Bme1390I CCNGG 3 cut(s) 709, 755, 798
Bme18I GGWCC 1 cut(s) 509
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 176, 509
BmrFI CCNGG 3 cut(s) 709, 755, 798
BmrI ACTGGG 1 cut(s) 595
BmsI GCATC 1 cut(s) 874
BmuI ACTGGG 1 cut(s) 595
BpiI GAAGAC 2 cut(s) 354, 777
BpmI CTGGAG 1 cut(s) 780
Bpu14I TTCGAA 1 cut(s) 388
BpuEI CTTGAG 1 cut(s) 43
BpuMI CCSGG 1 cut(s) 709
Bsa29I ATCGAT 1 cut(s) 850
BsaAI YACGTR 1 cut(s) 908
BsaHI GRCGYC 2 cut(s) 459, 596
BsaJI CCNNGG 1 cut(s) 753
BsaWI WCCGGW 1 cut(s) 347
BsaXI ACNNNNNCTCC 2 cut(s) 734, 764
Bsc4I CCNNNNNNNGG 6 cut(s) 347, 428, 476, 503, 506, 797
Bse1I ACTGG 4 cut(s) 178, 208, 332, 601
BseBI CCWGG 2 cut(s) 755, 798
BseCI ATCGAT 1 cut(s) 850
BseDI CCNNGG 1 cut(s) 753
BseGI GGATG 3 cut(s) 223, 252, 665
BseLI CCNNNNNNNGG 6 cut(s) 347, 428, 476, 503, 506, 797
BseMII CTCAG 3 cut(s) 548, 564, 896
BseNI ACTGG 4 cut(s) 178, 208, 332, 601
BsePI GCGCGC 1 cut(s) 316
BseXI GCAGC 3 cut(s) 544, 595, 934
Bsh1236I CGCG 1 cut(s) 318
BshFI GGCC 2 cut(s) 177, 712
BshVI ATCGAT 1 cut(s) 850
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 5 cut(s) 313, 348, 456, 593, 709
BslFI GGGAC 1 cut(s) 583
BslI CCNNNNNNNGG 6 cut(s) 347, 428, 476, 503, 506, 797
BsmAI GTCTC 2 cut(s) 453, 568
BsmBI CGTCTC 2 cut(s) 453, 568
BsmFI GGGAC 1 cut(s) 583
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 2 cut(s) 177, 712
BsoBI CYCGRG 1 cut(s) 278
Bsp119I TTCGAA 1 cut(s) 388
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 3 cut(s) 52, 493, 685
BspACI CCGC 5 cut(s) 299, 407, 507, 555, 659
BspANI GGCC 2 cut(s) 177, 712
BspCNI CTCAG 3 cut(s) 547, 565, 895
BspDI ATCGAT 1 cut(s) 850
BspFNI CGCG 1 cut(s) 318
BspHI TCATGA 1 cut(s) 97
BspMI ACCTGC 1 cut(s) 868
BspPI GGATC 1 cut(s) 488
BspT104I TTCGAA 1 cut(s) 388
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 4 cut(s) 178, 208, 332, 601
BssECI CCNNGG 1 cut(s) 753
BssHII GCGCGC 1 cut(s) 316
BssMI GATC 3 cut(s) 52, 493, 685
BssNI GRCGYC 2 cut(s) 459, 596
Bst2UI CCWGG 2 cut(s) 755, 798
Bst4CI ACNGT 3 cut(s) 345, 718, 812
Bst6I CTCTTC 2 cut(s) 240, 279
BstACI GRCGYC 2 cut(s) 459, 596
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 388
BstC8I GCNNGC 3 cut(s) 318, 555, 945
BstDEI CTNAG 3 cut(s) 534, 573, 882
BstEII GGTNACC 1 cut(s) 757
BstF5I GGATG 3 cut(s) 223, 252, 665
BstFNI CGCG 1 cut(s) 318
BstHHI GCGC 3 cut(s) 318, 320, 865
BstKTI GATC 3 cut(s) 55, 496, 688
BstMAI GTCTC 2 cut(s) 453, 568
BstMBI GATC 3 cut(s) 52, 493, 685
BstMWI GCNNNNNNNGC 3 cut(s) 298, 869, 878
BstNI CCWGG 2 cut(s) 755, 798
BstPI GGTNACC 1 cut(s) 757
BstSCI CCNGG 3 cut(s) 707, 753, 796
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 3 cut(s) 544, 595, 934
BstV2I GAAGAC 2 cut(s) 354, 777
BstXI CCANNNNNNTGG 1 cut(s) 173
Bsu15I ATCGAT 1 cut(s) 850
BsuI GTATCC 1 cut(s) 30
BsuRI GGCC 2 cut(s) 177, 712
BsuTUI ATCGAT 1 cut(s) 850
BtsCI GGATG 3 cut(s) 223, 252, 665
BtsIMutI CAGTG 2 cut(s) 171, 672
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 3 cut(s) 318, 555, 945
CaiI CAGNNNCTG 1 cut(s) 803
CciI TCATGA 1 cut(s) 97
CfoI GCGC 3 cut(s) 318, 320, 865
Cfr13I GGNCC 2 cut(s) 176, 509
ClaI ATCGAT 1 cut(s) 850
CseI GACGC 3 cut(s) 281, 448, 585
Csp6I GTAC 4 cut(s) 4, 128, 813, 844
CviAII CATG 2 cut(s) 98, 952
CviQI GTAC 4 cut(s) 4, 128, 813, 844
DdeI CTNAG 3 cut(s) 534, 573, 882
DpnI GATC 3 cut(s) 54, 495, 687
DpnII GATC 3 cut(s) 52, 493, 685
EaeI YGGCCR 1 cut(s) 710
Eam1104I CTCTTC 2 cut(s) 240, 279
EarI CTCTTC 2 cut(s) 240, 279
EciI GGCGGA 1 cut(s) 396
Eco47I GGWCC 1 cut(s) 509
Eco57I CTGAAG 3 cut(s) 242, 399, 708
Eco88I CYCGRG 1 cut(s) 278
Eco91I GGTNACC 1 cut(s) 757
EcoO65I GGTNACC 1 cut(s) 757
EcoRII CCWGG 2 cut(s) 753, 796
EcoT22I ATGCAT 1 cut(s) 957
Esp3I CGTCTC 2 cut(s) 453, 568
FaeI CATG 2 cut(s) 101, 955
FaiI YATR 8 cut(s) 42, 66, 99, 115, 396, 855, 915, 953
FaqI GGGAC 1 cut(s) 583
FatI CATG 2 cut(s) 97, 951
FauI CCCGC 2 cut(s) 562, 666
Fnu4HI GCNGC 3 cut(s) 558, 609, 948
FokI GGATG 3 cut(s) 210, 239, 652
Fsp4HI GCNGC 3 cut(s) 558, 609, 948
FspBI CTAG 5 cut(s) 161, 183, 303, 935, 991
FspI TGCGCA 1 cut(s) 864
GlaI GCGC 3 cut(s) 317, 319, 864
GluI GCNGC 3 cut(s) 558, 609, 948
GsuI CTGGAG 1 cut(s) 780
HaeIII GGCC 2 cut(s) 177, 712
HapII CCGG 5 cut(s) 313, 348, 456, 593, 709
HgaI GACGC 3 cut(s) 281, 448, 585
HhaI GCGC 3 cut(s) 318, 320, 865
Hin1I GRCGYC 2 cut(s) 459, 596
Hin1II CATG 2 cut(s) 101, 955
Hin6I GCGC 3 cut(s) 316, 318, 863
HinP1I GCGC 3 cut(s) 316, 318, 863
HincII GTYRAC 2 cut(s) 248, 808
HindII GTYRAC 2 cut(s) 248, 808
HinfI GANTC 2 cut(s) 281, 437
HpaI GTTAAC 1 cut(s) 808
HpaII CCGG 5 cut(s) 313, 348, 456, 593, 709
HphI GGTGA 5 cut(s) 373, 474, 572, 633, 769
Hpy166II GTNNAC 4 cut(s) 188, 248, 296, 808
Hpy188I TCNGA 4 cut(s) 33, 286, 885, 961
Hpy188III TCNNGA 7 cut(s) 83, 98, 278, 491, 632, 653, 935
Hpy8I GTNNAC 4 cut(s) 188, 248, 296, 808
Hpy99I CGWCG 5 cut(s) 326, 405, 464, 702, 784
HpyAV CCTTC 6 cut(s) 237, 266, 395, 423, 483, 732
HpyCH4III ACNGT 3 cut(s) 345, 718, 812
HpyCH4IV ACGT 1 cut(s) 907
HpyCH4V TGCA 1 cut(s) 955
HpyF10VI GCNNNNNNNGC 3 cut(s) 298, 869, 878
HpyF3I CTNAG 3 cut(s) 534, 573, 882
HpySE526I ACGT 1 cut(s) 907
Hsp92I GRCGYC 2 cut(s) 459, 596
Hsp92II CATG 2 cut(s) 101, 955
HspAI GCGC 3 cut(s) 316, 318, 863
KspAI GTTAAC 1 cut(s) 808
Kzo9I GATC 3 cut(s) 52, 493, 685
LmnI GCTCC 1 cut(s) 755
Lsp1109I GCAGC 3 cut(s) 544, 595, 934
LweI GCATC 1 cut(s) 874
MaeI CTAG 5 cut(s) 161, 183, 303, 935, 991
MaeII ACGT 1 cut(s) 907
MaeIII GTNAC 3 cut(s) 737, 757, 925
MalI GATC 3 cut(s) 54, 495, 687
MboI GATC 3 cut(s) 52, 493, 685
MboII GAAGA 7 cut(s) 146, 227, 266, 345, 354, 432, 777
MluCI AATT 6 cut(s) 139, 150, 287, 731, 832, 962
MlyI GAGTC 1 cut(s) 290
MmeI TCCRAC 2 cut(s) 242, 361
Mph1103I ATGCAT 1 cut(s) 957
MseI TTAA 1 cut(s) 807
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 5 cut(s) 313, 348, 456, 593, 709
MspR9I CCNGG 3 cut(s) 709, 755, 798
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 2 cut(s) 755, 798
MvnI CGCG 1 cut(s) 318
MwoI GCNNNNNNNGC 3 cut(s) 298, 869, 878
NciI CCSGG 1 cut(s) 709
NdeII GATC 3 cut(s) 52, 493, 685
NlaIII CATG 2 cut(s) 101, 955
NmuCI GTSAC 2 cut(s) 737, 757
NsbI TGCGCA 1 cut(s) 864
NsiI ATGCAT 1 cut(s) 957
NspV TTCGAA 1 cut(s) 388
PagI TCATGA 1 cut(s) 97
PalAI GGCGCGCC 1 cut(s) 316
PaqCI CACCTGC 1 cut(s) 868
PauI GCGCGC 1 cut(s) 316
PctI GAATGC 1 cut(s) 955
PfeI GAWTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 476
PkrI GCNGC 3 cut(s) 559, 610, 949
PleI GAGTC 1 cut(s) 289
PpsI GAGTC 1 cut(s) 289
Ppu21I YACGTR 1 cut(s) 908
Psp6I CCWGG 2 cut(s) 753, 796
PspEI GGTNACC 1 cut(s) 757
PspGI CCWGG 2 cut(s) 753, 796
PspPI GGNCC 2 cut(s) 176, 509
PstNI CAGNNNCTG 1 cut(s) 803
PteI GCGCGC 1 cut(s) 316
RsaI GTAC 4 cut(s) 5, 129, 814, 845
RsaNI GTAC 4 cut(s) 4, 128, 813, 844
SaqAI TTAA 1 cut(s) 807
SatI GCNGC 3 cut(s) 558, 609, 948
Sau3AI GATC 3 cut(s) 52, 493, 685
Sau96I GGNCC 2 cut(s) 176, 509
SchI GAGTC 1 cut(s) 290
ScrFI CCNGG 3 cut(s) 709, 755, 798
SfaNI GCATC 1 cut(s) 874
SfuI TTCGAA 1 cut(s) 388
SgsI GGCGCGCC 1 cut(s) 316
SinI GGWCC 1 cut(s) 509
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
SpeI ACTAGT 1 cut(s) 182
Sse9I AATT 6 cut(s) 139, 150, 287, 731, 832, 962
SsiI CCGC 5 cut(s) 299, 407, 507, 555, 659
SspI AATATT 1 cut(s) 628
SspMI CTAG 5 cut(s) 161, 183, 303, 935, 991
StyD4I CCNGG 3 cut(s) 707, 753, 796
TaaI ACNGT 3 cut(s) 345, 718, 812
TaiI ACGT 1 cut(s) 910
TaqI TCGA 2 cut(s) 388, 850
TasI AATT 6 cut(s) 139, 150, 287, 731, 832, 962
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 1 cut(s) 437
Tru1I TTAA 1 cut(s) 807
Tru9I TTAA 1 cut(s) 807
TscAI CASTG 2 cut(s) 178, 679
TseFI GTSAC 2 cut(s) 737, 757
TseI GCWGC 3 cut(s) 557, 608, 947
Tsp45I GTSAC 2 cut(s) 737, 757
TspDTI ATGAA 1 cut(s) 86
TspGWI ACGGA 2 cut(s) 348, 686
TspRI CASTG 2 cut(s) 178, 679
Van91I CCANNNNNTGG 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 509
XbaI TCTAGA 1 cut(s) 934
XspI CTAG 5 cut(s) 161, 183, 303, 935, 991
Zsp2I ATGCAT 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.