FvH4_6g04722

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000220
Physical Location & Seq
Reverse (-)
2600068 .. 2604974
4907 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g04722.t1

Sequence Viewer

Length: 1935 bp
ATGGCTAGTGGGGGAAGTAGACGTGATCCTGCATGGGAGCATGGAGAACAAATTCCTAGCAACAAAAATGGTAGCATATGCAAATATTGTCGGTTGACAATGAAAAGTGGTGGAGTGACACGTCTCAAGTACCACCTAAGCGGCATGGATCCTGGAAACAATGTGTTGCGATGTGAGTCTGTTCCAACAGAAGTGAAGGCATATATTAAATCCTTATTGATGAATAAGCAAAAAGAAAAGGCAAAAAAGGCACATGTGATGGAAGAGGTTCGTGCAGAGTTTCGTGGAGAATCAATTGGCTCACAAGATGACAGTGATGATGAAGGAATTGTATATCCTGATGAGAACATGACCGTTGAGGAACTGAGAGAGTATCGACAAGCAATTCGTAACTCTAAAGAAGCACAATGGAACAGAGAGCACCTCCATAAAGTTCCTAACCGGGATGGGTCAAGTAGCGGTACACACATGCGGCGAGCAACAAGTCTACGAGAGCCACAACCAAGTCAACCAACACAACCGTTGGGAGCAAAGTTTAGCAGCTCTTTTCGAGCCCGTCAAAAGAGCATCAAAGATTCCTTCTCAAAGGGTTCAGTGAAGGAGATGATGGGTCGTTTCATCAGTAAGTTTTTCATTTATGATAATATCCCTGCTGAGAAAGCAAATTCTCTTCATTATGAAAATATGGTAATCGGAATCCAAAGAGCAGGAGAAGGAGTACTGCCCCCTACACCTTATGAGATAAGACACAAGTATTTGGATATGGAGTTTAACGACATTACTGAACATGTTAACACACTGAGGGCAACATGGGAGACCTACGGATGCACGATTATGTGCGATGGATGGACAGGGCCAACTAGATTGTCTATCATAAATTTTATGGTTTACTCCAAAGGTTATTATTTAAACCCTCGATACAACTATAAATCTGGCGTGGGAGACGATTATAAGCTGATTGAAGCTGTGCATAAAGTTTTTTCAAGATGTGACCCTAATTGTCCAACAATAGGCCAATTTGGAAAGGAGCTTACATATTTTAAAGATGCAAAGTTAAACTTTGGAATGCCGGCAGCCATTGCATCAAGATCAGAGATGTCTCCAAGTGAAGAGGCAGCTTATTCGCATGTGGACCAGAAAGATCCATCAGATGTCTTTGATATTGGTACAGAGTTTGATGATGAAGCAATAGATCAACTTTGTGAATGGATAAGGCCACTTCATCTTGATGACGAGGAACGCAATCCATCACCTACAGTTGCTCGAGAAGCACGTGCGGAAGGAATAAATGTAGAAAGAGTAATTCAAGAAGAGGTTATAGGTCCTAATAGAGAATCTATCGATGCATTAGTGGGTAGAGCTAACATTCTAATTTCCTCTCGTAGCTCACAAGTTCCTTCCAGGACAAACGAAAACTCTAGCACCAGATCAGGAGGCTCATCAAGCATCAGGGGTGATGATAGTGGAAGCTACGGCGGTGGTGGAGATGATGTTGGAGTTCAAGATTACAATGGGAGCCAACCTGGTCATATGAGCCCATTCACTTGTGAGCCAAACTTCACACATGCAACACAAGATGGTGATCATGGAAGTAGGAGAGCAGCCTCAATATTACGGCTCAACCCAGCTACCGCCGCATCTTCTTTTCCAAAAGTAGTTGCTGTTGCTGTGCCCAGCTGCCGCCGTCGTCGTCTCTGCCCCGCCGTCGTCGTCTCTGCCCAGAAGTTGTCATCGTGCCCAGAGGACGCCGCCGTGCCACAACCCGCGCCAAAACCCAGGTCTCGACGCCGCCGTGCCAAAGCCCAGGTCCCGACGCCACCGGTCTCGACGCTGCCGCGCCCTTGTGCCGTGCCGATCCACTCTGTCACGACGCAGCCGACGCCGCGTTTCTTGGACCCGGTTCTGCTAATCCGATCCGACCCGTTTCTAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

645

Amino Acids

71.52

Weight (kDa)

8.12

Isoelectric Point (pI)

56.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 243 - 299 5.8e-13 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AccI GTMKAC 2 cut(s) 19, 487
AccII CGCG 3 cut(s) 1766, 1837, 1885
AclWI GGATC 6 cut(s) 20, 143, 156, 1136, 1849, 1908
AcsI RAATTY 3 cut(s) 51, 664, 877
AcvI CACGTG 1 cut(s) 1274
AcyI GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
AfaI GTAC 4 cut(s) 131, 463, 720, 1168
AfiI CCNNNNNNNGG 1 cut(s) 1010
AflIII ACRYGT 3 cut(s) 119, 253, 787
AgeI ACCGGT 1 cut(s) 1819
AgsI TTSAA 4 cut(s) 962, 984, 1307, 1502
AjiI CACGTC 2 cut(s) 23, 122
AjnI CCWGG 5 cut(s) 151, 1400, 1522, 1775, 1803
Alw21I GWGCWC 1 cut(s) 423
Alw26I GTCTC 8 cut(s) 128, 809, 936, 1104, 1697, 1717, 1785, 1828
AlwI GGATC 6 cut(s) 20, 143, 156, 1136, 1849, 1908
Ama87I CYCGRG 1 cut(s) 1263
AoxI GGCC 3 cut(s) 854, 1012, 1214
ApeKI GCWGC 7 cut(s) 540, 1073, 1115, 1601, 1677, 1831, 1873
ApoI RAATTY 3 cut(s) 51, 664, 877
ArsI GACNNNNNNTTYG 6 cut(s) 369, 401, 1763, 1791, 1795, 1823
AsiGI ACCGGT 1 cut(s) 1819
Asp700I GAANNNNTTC 2 cut(s) 51, 267
AspLEI GCGC 2 cut(s) 1768, 1839
AspS9I GGNCC 5 cut(s) 854, 1132, 1322, 1807, 1894
AsuC2I CCSGG 2 cut(s) 443, 1898
AsuHPI GGTGA 3 cut(s) 1242, 1466, 1592
AvaI CYCGRG 1 cut(s) 1263
AvaII GGWCC 4 cut(s) 1132, 1322, 1807, 1894
BaeGI GKGCMC 2 cut(s) 1674, 1739
BamHI GGATCC 1 cut(s) 148
BanII GRGCYC 2 cut(s) 556, 1538
BbrPI CACGTG 1 cut(s) 1274
Bbv12I GWGCWC 1 cut(s) 423
BbvI GCAGC 7 cut(s) 552, 1085, 1127, 1613, 1664, 1818, 1885
BccI CCATC 8 cut(s) 253, 440, 601, 836, 840, 1153, 1255, 1571
BceAI ACGGC 7 cut(s) 1489, 1631, 1668, 1688, 1736, 1776, 1832
BcgI CGANNNNNNTGC 2 cut(s) 1104, 1138
BciT130I CCWGG 5 cut(s) 153, 1402, 1524, 1777, 1805
BclI TGATCA 1 cut(s) 1582
BcnI CCSGG 2 cut(s) 443, 1898
BcoDI GTCTC 8 cut(s) 128, 809, 936, 1104, 1697, 1717, 1785, 1828
BfaI CTAG 5 cut(s) 6, 57, 861, 1419, 1928
BfmI CTRYAG 1 cut(s) 1254
BmcAI AGTACT 1 cut(s) 720
Bme1390I CCNGG 7 cut(s) 153, 443, 1402, 1524, 1777, 1805, 1898
Bme18I GGWCC 4 cut(s) 1132, 1322, 1807, 1894
BmeT110I CYCGRG 1 cut(s) 1263
BmgBI CACGTC 2 cut(s) 23, 122
BmgT120I GGNCC 5 cut(s) 854, 1132, 1322, 1807, 1894
BmiI GGNNCC 4 cut(s) 150, 1517, 1809, 1896
BmrFI CCNGG 7 cut(s) 153, 443, 1402, 1524, 1777, 1805, 1898
BmsI GCATC 7 cut(s) 576, 815, 1036, 1091, 1333, 1455, 1646
BplI GAGNNNNNCTC 2 cut(s) 408, 440
Bpu10I CCTNAGC 1 cut(s) 137
BpuEI CTTGAG 1 cut(s) 110
BpuMI CCSGG 2 cut(s) 443, 1898
Bsa29I ATCGAT 1 cut(s) 1341
BsaAI YACGTR 1 cut(s) 1274
BsaBI GATNNNNATC 1 cut(s) 1581
BsaHI GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
BsaI GGTCTC 3 cut(s) 809, 1785, 1828
BsaJI CCNNGG 2 cut(s) 1775, 1803
BsaWI WCCGGW 1 cut(s) 1819
BsaXI ACNNNNNCTCC 4 cut(s) 702, 732, 1476, 1506
Bsc4I CCNNNNNNNGG 1 cut(s) 1010
Bse118I RCCGGY 2 cut(s) 1069, 1819
Bse3DI GCAATG 1 cut(s) 1077
Bse8I GATNNNNATC 1 cut(s) 1581
BseBI CCWGG 5 cut(s) 153, 1402, 1524, 1777, 1805
BseCI ATCGAT 1 cut(s) 1341
BseDI CCNNGG 2 cut(s) 1775, 1803
BseGI GGATG 3 cut(s) 451, 830, 851
BseJI GATNNNNATC 1 cut(s) 1581
BseLI CCNNNNNNNGG 1 cut(s) 1010
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 3 cut(s) 356, 645, 791
BseSI GKGCMC 2 cut(s) 1674, 1739
BseXI GCAGC 7 cut(s) 552, 1085, 1127, 1613, 1664, 1818, 1885
BseYI CCCAGC 2 cut(s) 1624, 1673
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 3 cut(s) 1766, 1837, 1885
BshFI GGCC 3 cut(s) 856, 1014, 1216
BshTI ACCGGT 1 cut(s) 1819
BshVI ATCGAT 1 cut(s) 1341
BsiHKAI GWGCWC 1 cut(s) 423
BsiHKCI CYCGRG 1 cut(s) 1263
BsiSI CCGG 4 cut(s) 442, 1070, 1820, 1898
BslFI GGGAC 1 cut(s) 1793
BslI CCNNNNNNNGG 1 cut(s) 1010
BsmAI GTCTC 8 cut(s) 128, 809, 936, 1104, 1697, 1717, 1785, 1828
BsmBI CGTCTC 4 cut(s) 128, 936, 1697, 1717
BsmFI GGGAC 1 cut(s) 1793
BsmI GAATGC 1 cut(s) 1071
BsnI GGCC 3 cut(s) 856, 1014, 1216
Bso31I GGTCTC 3 cut(s) 809, 1785, 1828
BsoBI CYCGRG 1 cut(s) 1263
Bsp1286I GDGCHC 5 cut(s) 423, 556, 1538, 1674, 1739
Bsp143I GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
BspANI GGCC 3 cut(s) 856, 1014, 1216
BspCNI CTCAG 3 cut(s) 357, 646, 792
BspDI ATCGAT 1 cut(s) 1341
BspFNI CGCG 3 cut(s) 1766, 1837, 1885
BspLI GGNNCC 4 cut(s) 150, 1517, 1809, 1896
BspPI GGATC 6 cut(s) 20, 143, 156, 1136, 1849, 1908
BspTNI GGTCTC 3 cut(s) 809, 1785, 1828
BsrDI GCAATG 1 cut(s) 1077
BsrFI RCCGGY 2 cut(s) 1069, 1819
BssAI RCCGGY 2 cut(s) 1069, 1819
BssECI CCNNGG 2 cut(s) 1775, 1803
BssMI GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
BssNI GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
Bst2UI CCWGG 5 cut(s) 153, 1402, 1524, 1777, 1805
Bst4CI ACNGT 4 cut(s) 314, 355, 522, 1258
Bst6I CTCTTC 4 cut(s) 258, 675, 1104, 1305
BstACI GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
BstAPI GCANNNNNTGC 1 cut(s) 1079
BstBAI YACGTR 1 cut(s) 1274
BstC8I GCNNGC 2 cut(s) 477, 1071
BstDEI CTNAG 4 cut(s) 137, 365, 654, 800
BstF5I GGATG 3 cut(s) 451, 830, 851
BstFNI CGCG 3 cut(s) 1766, 1837, 1885
BstHHI GCGC 2 cut(s) 1768, 1839
BstKTI GATC 9 cut(s) 28, 151, 1091, 1144, 1195, 1430, 1585, 1857, 1916
BstMAI GTCTC 8 cut(s) 128, 809, 936, 1104, 1697, 1717, 1785, 1828
BstMBI GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
BstMWI GCNNNNNNNGC 8 cut(s) 248, 659, 1079, 1268, 1443, 1634, 1879, 1882
BstNI CCWGG 5 cut(s) 153, 1402, 1524, 1777, 1805
BstNSI RCATGY 5 cut(s) 257, 472, 791, 1130, 1568
BstSCI CCNGG 7 cut(s) 151, 441, 1400, 1522, 1775, 1803, 1896
BstSFI CTRYAG 1 cut(s) 1254
BstSLI GKGCMC 2 cut(s) 1674, 1739
BstUI CGCG 3 cut(s) 1766, 1837, 1885
BstV1I GCAGC 7 cut(s) 552, 1085, 1127, 1613, 1664, 1818, 1885
BstX2I RGATCY 2 cut(s) 148, 1141
BstYI RGATCY 2 cut(s) 148, 1141
Bsu15I ATCGAT 1 cut(s) 1341
BsuRI GGCC 3 cut(s) 856, 1014, 1216
BsuTUI ATCGAT 1 cut(s) 1341
BtgZI GCGATG 2 cut(s) 184, 855
BtrI CACGTC 2 cut(s) 23, 122
BtsCI GGATG 3 cut(s) 451, 830, 851
BtsIMutI CAGTG 3 cut(s) 319, 600, 797
Cac8I GCNNGC 2 cut(s) 477, 1071
CfoI GCGC 2 cut(s) 1768, 1839
Cfr10I RCCGGY 2 cut(s) 1069, 1819
Cfr13I GGNCC 5 cut(s) 854, 1132, 1322, 1807, 1894
ClaI ATCGAT 1 cut(s) 1341
CseI GACGC 6 cut(s) 1754, 1794, 1822, 1837, 1879, 1888
CsiI ACCWGGT 1 cut(s) 1522
Csp6I GTAC 4 cut(s) 130, 462, 719, 1167
CspAI ACCGGT 1 cut(s) 1819
CviQI GTAC 4 cut(s) 130, 462, 719, 1167
DdeI CTNAG 4 cut(s) 137, 365, 654, 800
DpnI GATC 9 cut(s) 27, 150, 1090, 1143, 1194, 1429, 1584, 1856, 1915
DpnII GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
DraI TTTAAA 2 cut(s) 909, 1042
Eam1104I CTCTTC 4 cut(s) 258, 675, 1104, 1305
EarI CTCTTC 4 cut(s) 258, 675, 1104, 1305
Eco24I GRGCYC 2 cut(s) 556, 1538
Eco31I GGTCTC 3 cut(s) 809, 1785, 1828
Eco47I GGWCC 4 cut(s) 1132, 1322, 1807, 1894
Eco72I CACGTG 1 cut(s) 1274
Eco88I CYCGRG 1 cut(s) 1263
EcoO109I RGGNCCY 2 cut(s) 1322, 1807
EcoRII CCWGG 5 cut(s) 151, 1400, 1522, 1775, 1803
EcoT22I ATGCAT 1 cut(s) 1348
EcoT38I GRGCYC 2 cut(s) 556, 1538
Esp3I CGTCTC 4 cut(s) 128, 936, 1697, 1717
FalI AAGNNNNNCTT 2 cut(s) 1043, 1075
FaqI GGGAC 1 cut(s) 1793
FauI CCCGC 2 cut(s) 1708, 1771
FauNDI CATATG 2 cut(s) 77, 1530
FbaI TGATCA 1 cut(s) 1582
FblI GTMKAC 2 cut(s) 19, 487
FokI GGATG 3 cut(s) 458, 837, 858
FriOI GRGCYC 2 cut(s) 556, 1538
FspBI CTAG 5 cut(s) 6, 57, 861, 1419, 1928
GlaI GCGC 2 cut(s) 1767, 1838
GsaI CCCAGC 2 cut(s) 1628, 1677
HaeIII GGCC 3 cut(s) 856, 1014, 1216
HapII CCGG 4 cut(s) 442, 1070, 1820, 1898
HgaI GACGC 6 cut(s) 1754, 1794, 1822, 1837, 1879, 1888
HhaI GCGC 2 cut(s) 1768, 1839
Hin1I GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
Hin6I GCGC 2 cut(s) 1766, 1837
HinP1I GCGC 2 cut(s) 1766, 1837
HincII GTYRAC 3 cut(s) 96, 509, 793
HindII GTYRAC 3 cut(s) 96, 509, 793
HinfI GANTC 5 cut(s) 176, 290, 575, 696, 1334
HpaI GTTAAC 1 cut(s) 793
HpaII CCGG 4 cut(s) 442, 1070, 1820, 1898
HphI GGTGA 3 cut(s) 1242, 1466, 1592
Hpy166II GTNNAC 8 cut(s) 20, 96, 464, 488, 509, 793, 889, 1132
Hpy188I TCNGA 6 cut(s) 695, 1093, 1150, 1913, 1918, 1934
Hpy8I GTNNAC 8 cut(s) 20, 96, 464, 488, 509, 793, 889, 1132
Hpy99I CGWCG 9 cut(s) 1689, 1692, 1709, 1712, 1788, 1816, 1831, 1873, 1882
HpyAV CCTTC 7 cut(s) 190, 317, 589, 592, 707, 1274, 1407
HpyCH4III ACNGT 4 cut(s) 314, 355, 522, 1258
HpyCH4IV ACGT 3 cut(s) 22, 121, 1273
HpyCH4V TGCA 9 cut(s) 32, 81, 275, 828, 970, 1049, 1082, 1346, 1568
HpyF10VI GCNNNNNNNGC 8 cut(s) 248, 659, 1079, 1268, 1443, 1634, 1879, 1882
HpyF3I CTNAG 4 cut(s) 137, 365, 654, 800
HpySE526I ACGT 3 cut(s) 22, 121, 1273
Hsp92I GRCGYC 4 cut(s) 1746, 1786, 1814, 1880
HspAI GCGC 2 cut(s) 1766, 1837
KroI GCCGGC 1 cut(s) 1069
KroNI GCCGGC 1 cut(s) 1071
Ksp22I TGATCA 1 cut(s) 1582
KspAI GTTAAC 1 cut(s) 793
Kzo9I GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
LmnI GCTCC 4 cut(s) 37, 527, 1027, 1515
Lsp1109I GCAGC 7 cut(s) 552, 1085, 1127, 1613, 1664, 1818, 1885
LweI GCATC 7 cut(s) 576, 815, 1036, 1091, 1333, 1455, 1646
MabI ACCWGGT 1 cut(s) 1522
MaeI CTAG 5 cut(s) 6, 57, 861, 1419, 1928
MaeII ACGT 3 cut(s) 22, 121, 1273
MaeIII GTNAC 4 cut(s) 115, 389, 989, 1864
MalI GATC 9 cut(s) 27, 150, 1090, 1143, 1194, 1429, 1584, 1856, 1915
MboI GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
MboII GAAGA 5 cut(s) 275, 662, 1121, 1322, 1632
MfeI CAATTG 1 cut(s) 294
MflI RGATCY 2 cut(s) 148, 1141
MhlI GDGCHC 5 cut(s) 423, 556, 1538, 1674, 1739
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 3 cut(s) 209, 1028, 1474
Mph1103I ATGCAT 1 cut(s) 1348
MroNI GCCGGC 1 cut(s) 1069
MroXI GAANNNNTTC 2 cut(s) 51, 267
MseI TTAA 6 cut(s) 207, 771, 792, 908, 1041, 1055
MslI CAYNNNNRTG 2 cut(s) 833, 1227
MspA1I CMGCKG 1 cut(s) 1677
MspI CCGG 4 cut(s) 442, 1070, 1820, 1898
MspR9I CCNGG 7 cut(s) 153, 443, 1402, 1524, 1777, 1805, 1898
MunI CAATTG 1 cut(s) 294
Mva1269I GAATGC 1 cut(s) 1071
MvaI CCWGG 5 cut(s) 153, 1402, 1524, 1777, 1805
MvnI CGCG 3 cut(s) 1766, 1837, 1885
MwoI GCNNNNNNNGC 8 cut(s) 248, 659, 1079, 1268, 1443, 1634, 1879, 1882
NaeI GCCGGC 1 cut(s) 1071
NciI CCSGG 2 cut(s) 443, 1898
NdeI CATATG 2 cut(s) 77, 1530
NdeII GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
NgoMIV GCCGGC 1 cut(s) 1069
NlaIV GGNNCC 4 cut(s) 150, 1517, 1809, 1896
NmuCI GTSAC 3 cut(s) 115, 989, 1864
NsiI ATGCAT 1 cut(s) 1348
NspI RCATGY 5 cut(s) 257, 472, 791, 1130, 1568
PaeR7I CTCGAG 1 cut(s) 1263
PciI ACATGT 2 cut(s) 253, 787
PcsI WCGNNNNNNNCGW 3 cut(s) 1270, 1789, 1874
PctI GAATGC 1 cut(s) 1071
PdiI GCCGGC 1 cut(s) 1071
PdmI GAANNNNTTC 2 cut(s) 51, 267
PfeI GAWTC 4 cut(s) 290, 575, 696, 1334
PfoI TCCNGGA 2 cut(s) 151, 1400
PinAI ACCGGT 1 cut(s) 1819
PleI GAGTC 1 cut(s) 184
PmaCI CACGTG 1 cut(s) 1274
PmlI CACGTG 1 cut(s) 1274
PpsI GAGTC 1 cut(s) 184
Ppu21I YACGTR 1 cut(s) 1274
PpuMI RGGWCCY 2 cut(s) 1322, 1807
PscI ACATGT 2 cut(s) 253, 787
PsiI TTATAA 1 cut(s) 951
Psp5II RGGWCCY 2 cut(s) 1322, 1807
Psp6I CCWGG 5 cut(s) 151, 1400, 1522, 1775, 1803
PspCI CACGTG 1 cut(s) 1274
PspFI CCCAGC 2 cut(s) 1624, 1673
PspGI CCWGG 5 cut(s) 151, 1400, 1522, 1775, 1803
PspN4I GGNNCC 4 cut(s) 150, 1517, 1809, 1896
PspPI GGNCC 5 cut(s) 854, 1132, 1322, 1807, 1894
PspPPI RGGWCCY 2 cut(s) 1322, 1807
PsuI RGATCY 2 cut(s) 148, 1141
PvuII CAGCTG 1 cut(s) 1677
RsaI GTAC 4 cut(s) 131, 463, 720, 1168
RsaNI GTAC 4 cut(s) 130, 462, 719, 1167
RseI CAYNNNNRTG 2 cut(s) 833, 1227
SaqAI TTAA 6 cut(s) 207, 771, 792, 908, 1041, 1055
Sau3AI GATC 9 cut(s) 25, 148, 1088, 1141, 1192, 1427, 1582, 1854, 1913
Sau96I GGNCC 5 cut(s) 854, 1132, 1322, 1807, 1894
ScaI AGTACT 1 cut(s) 720
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 7 cut(s) 153, 443, 1402, 1524, 1777, 1805, 1898
SduI GDGCHC 5 cut(s) 423, 556, 1538, 1674, 1739
SexAI ACCWGGT 1 cut(s) 1522
SfaNI GCATC 7 cut(s) 576, 815, 1036, 1091, 1333, 1455, 1646
SfcI CTRYAG 1 cut(s) 1254
Sfr274I CTCGAG 1 cut(s) 1263
SinI GGWCC 4 cut(s) 1132, 1322, 1807, 1894
SlaI CTCGAG 1 cut(s) 1263
SmiMI CAYNNNNRTG 2 cut(s) 833, 1227
SmlI CTYRAG 2 cut(s) 125, 1263
SmoI CTYRAG 2 cut(s) 125, 1263
SspI AATATT 2 cut(s) 86, 1611
SspMI CTAG 5 cut(s) 6, 57, 861, 1419, 1928
StyD4I CCNGG 7 cut(s) 151, 441, 1400, 1522, 1775, 1803, 1896
TaaI ACNGT 4 cut(s) 314, 355, 522, 1258
TaiI ACGT 3 cut(s) 25, 124, 1276
TaqI TCGA 7 cut(s) 376, 550, 916, 1264, 1341, 1783, 1826
TatI WGTACW 1 cut(s) 718
TauI GCSGC 8 cut(s) 144, 475, 1637, 1683, 1751, 1791, 1837, 1885
TfiI GAWTC 4 cut(s) 290, 575, 696, 1334
Tru1I TTAA 6 cut(s) 207, 771, 792, 908, 1041, 1055
Tru9I TTAA 6 cut(s) 207, 771, 792, 908, 1041, 1055
TscAI CASTG 3 cut(s) 319, 600, 804
TseFI GTSAC 3 cut(s) 115, 989, 1864
TseI GCWGC 7 cut(s) 540, 1073, 1115, 1601, 1677, 1831, 1873
Tsp45I GTSAC 3 cut(s) 115, 989, 1864
TspDTI ATGAA 9 cut(s) 116, 236, 336, 607, 622, 662, 693, 1197, 1211
TspGWI ACGGA 1 cut(s) 837
TspRI CASTG 3 cut(s) 319, 600, 804
VpaK11BI GGWCC 4 cut(s) 1132, 1322, 1807, 1894
XapI RAATTY 3 cut(s) 51, 664, 877
XceI RCATGY 5 cut(s) 257, 472, 791, 1130, 1568
XhoI CTCGAG 1 cut(s) 1263
XmiI GTMKAC 2 cut(s) 19, 487
XmnI GAANNNNTTC 2 cut(s) 51, 267
XspI CTAG 5 cut(s) 6, 57, 861, 1419, 1928
ZrmI AGTACT 1 cut(s) 720
Zsp2I ATGCAT 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.