Rmu_sc0000441.1_g000099

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000441.1
OG0000220
Physical Location & Seq
Reverse (-)
354420 .. 360336
5917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000441.1_g000099.1.cds

Sequence Viewer

Length: 1539 bp
atggttgtgaggctgcttccggcgcctgagattgatagcaggctgatcgaggtatgcatagtcgtcggcgtcaagcatttgtcgaatcgtgccagagtggagcagaaacagaagttggaaaagcttgtatactgctactacaacatgacgccgctactgcgagatagacaggcaatgaataatgtggtaaatgaaaacaactatatagatctacttcatgttgcaattgagtcacttgataatggcattgatccacttcatgattggattatgcatgcacacctcgatgatgaagctggaagatctcttgcacaagttgtagaaactgcaactaatgctggaatcaacgtagagagggtcttatctgaagaagttgttaaaaacacaggagataattcagatagtgatgatgcgtggggtggtacagcaactccaaattgttctgatgatggcggagagggtggaagcggaacatgtggtaattttgatcataccatgcaagatgaagaccatggagtgagaacagctggtcatggtgctcaagagaatacccgatatgggaggaggactagaggtgcaaatgatgatcaaagtaccccatctgatgtttcttcaattgtcttaagttttgactctatcagtttaggcacagagcgcagtgggatctcaaatgaatctcatgaaggcaacaatcaatttggctatgacacttatggatataatcaatatggagaagtatatgataaccttcaaatcccaaaaacctccacggcccaccttgaagctctcaactccagcagtccagaaccggcggtgccaccccaagaaccagccgggaaaataccaaaccggccactagaagaggcagaaaatcccttgtccggttcgcacccttccagtccaactttgaccaccatattttgtcaccaccagagccttgattctagcatccaggaacagggaccaccttcccagaaaccggtgaaaaaaagcccaagccgcagacgtcactgccctctgccacgtcatccgcccacgtcagcaactgtgcaacgtcagccagccacgtcaacaccggtgccacgtcagtactggctaaagtcaccgccgatgacttttccgaccattttcctgcgactttttcctaccactatttccggccaaattttccggcgacctatttcaaggatgagtaacctgaataaattggactttgctccattgggaacaactggctctggatatcacaggtgggttcgtgatgtccgccatcatctcaaggccgatgaaatcctggatacgattctcgagccttgccaggaggtgctaactgttgagcaagctcaagctttggaagcaaatagagcagccttagaggcaaataaggcgaaatccatcatcctaatgactcgtcagatggatgattcgctccagtacgagtgtatgaatgaagaagaccccagaagactgtgggtctcactcgaagaaagatttggcaatgtccgtgactccctgcttcctaccctagaagtgagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

512

Amino Acids

56.97

Weight (kDa)

5.42

Isoelectric Point (pI)

53.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1009
AccB1I GGYRCC 3 cut(s) 22, 814, 1078
AccI GTMKAC 1 cut(s) 129
AciI CCGC 8 cut(s) 152, 453, 468, 812, 1000, 1031, 1106, 1267
AclWI GGATC 2 cut(s) 245, 671
AcoI YGGCCR 2 cut(s) 851, 1159
AcsI RAATTY 1 cut(s) 1164
AcuI CTGAAG 1 cut(s) 387
AcyI GRCGYC 4 cut(s) 23, 69, 149, 1006
AfaI GTAC 4 cut(s) 424, 595, 1091, 1436
AfiI CCNNNNNNNGG 4 cut(s) 558, 881, 958, 979
AflII CTTAAG 1 cut(s) 622
AflIII ACRYGT 1 cut(s) 473
AgeI ACCGGT 2 cut(s) 979, 1075
AgsI TTSAA 4 cut(s) 615, 752, 782, 1185
AhdI GACNNNNNGTC 1 cut(s) 1472
AjiI CACGTC 4 cut(s) 1025, 1038, 1068, 1085
AjnI CCWGG 3 cut(s) 951, 1293, 1317
AjuI GAANNNNNNNTTGG 4 cut(s) 98, 130, 1476, 1508
AluBI AGCT 6 cut(s) 124, 296, 527, 785, 1343, 1349
AluI AGCT 6 cut(s) 124, 296, 527, 785, 1343, 1349
Alw21I GWGCWC 1 cut(s) 541
Alw26I GTCTC 1 cut(s) 1480
AlwI GGATC 2 cut(s) 245, 671
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 1 cut(s) 1307
AoxI GGCC 4 cut(s) 771, 851, 1159, 1281
ApeKI GCWGC 2 cut(s) 13, 1367
ApoI RAATTY 1 cut(s) 1164
AsiGI ACCGGT 2 cut(s) 979, 1075
AspLEI GCGC 2 cut(s) 25, 657
AspS9I GGNCC 2 cut(s) 772, 962
AsuC2I CCSGG 1 cut(s) 835
AsuHPI GGTGA 3 cut(s) 917, 994, 1095
AvaI CYCGRG 1 cut(s) 1307
AvaII GGWCC 1 cut(s) 962
BanI GGYRCC 3 cut(s) 22, 814, 1078
BbsI GAAGAC 3 cut(s) 513, 1461, 1471
Bbv12I GWGCWC 1 cut(s) 541
BbvI GCAGC 1 cut(s) 1379
BccI CCATC 5 cut(s) 443, 607, 1278, 1403, 1411
BceAI ACGGC 1 cut(s) 786
BcgI CGANNNNNNTGC 4 cut(s) 28, 46, 62, 80
BciT130I CCWGG 3 cut(s) 953, 1295, 1319
BciVI GTATCC 1 cut(s) 1291
BclI TGATCA 2 cut(s) 487, 586
BcnI CCSGG 1 cut(s) 835
BcoDI GTCTC 1 cut(s) 1480
BfaI CTAG 4 cut(s) 570, 857, 945, 1526
BfoI RGCGCY 1 cut(s) 26
BfrI CTTAAG 1 cut(s) 622
BfuI GTATCC 1 cut(s) 1291
BglI GCCNNNNNGGC 1 cut(s) 1376
BglII AGATCT 2 cut(s) 208, 302
BisI GCNGC 4 cut(s) 14, 152, 1000, 1368
BlsI GCNGC 4 cut(s) 15, 153, 1001, 1369
BmcAI AGTACT 1 cut(s) 1091
Bme1390I CCNGG 4 cut(s) 835, 953, 1295, 1319
Bme18I GGWCC 1 cut(s) 962
BmeRI GACNNNNNGTC 1 cut(s) 1472
BmeT110I CYCGRG 1 cut(s) 1307
BmgBI CACGTC 4 cut(s) 1025, 1038, 1068, 1085
BmgT120I GGNCC 2 cut(s) 772, 962
BmiI GGNNCC 4 cut(s) 24, 816, 963, 1080
BmrFI CCNGG 4 cut(s) 835, 953, 1295, 1319
BmsI GCATC 2 cut(s) 400, 957
BpiI GAAGAC 3 cut(s) 513, 1461, 1471
BpmI CTGGAG 2 cut(s) 778, 1415
BpuEI CTTGAG 3 cut(s) 525, 1262, 1329
BpuMI CCSGG 1 cut(s) 835
BsaHI GRCGYC 4 cut(s) 23, 69, 149, 1006
BsaI GGTCTC 1 cut(s) 1480
BsaJI CCNNGG 2 cut(s) 511, 768
BsaWI WCCGGW 3 cut(s) 881, 979, 1075
BsaXI ACNNNNNCTCC 2 cut(s) 415, 445
Bsc4I CCNNNNNNNGG 4 cut(s) 558, 881, 958, 979
Bse118I RCCGGY 4 cut(s) 808, 849, 979, 1075
Bse1I ACTGG 4 cut(s) 897, 1097, 1237, 1432
Bse3DI GCAATG 2 cut(s) 180, 1504
BseBI CCWGG 3 cut(s) 953, 1295, 1319
BseDI CCNNGG 2 cut(s) 511, 768
BseGI GGATG 5 cut(s) 948, 1027, 1194, 1398, 1426
BseLI CCNNNNNNNGG 4 cut(s) 558, 881, 958, 979
BseMI GCAATG 2 cut(s) 180, 1504
BseMII CTCAG 1 cut(s) 18
BseNI ACTGG 4 cut(s) 897, 1097, 1237, 1432
BseRI GAGGAG 1 cut(s) 577
BseXI GCAGC 1 cut(s) 1379
BshFI GGCC 4 cut(s) 773, 853, 1161, 1283
BshNI GGYRCC 3 cut(s) 22, 814, 1078
BshTI ACCGGT 2 cut(s) 979, 1075
BsiHKAI GWGCWC 1 cut(s) 541
BsiHKCI CYCGRG 1 cut(s) 1307
BsiSI CCGG 9 cut(s) 20, 809, 834, 850, 882, 980, 1076, 1158, 1171
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 4 cut(s) 558, 881, 958, 979
BsmAI GTCTC 1 cut(s) 1480
BsmFI GGGAC 1 cut(s) 975
BsnI GGCC 4 cut(s) 773, 853, 1161, 1283
Bso31I GGTCTC 1 cut(s) 1480
BsoBI CYCGRG 1 cut(s) 1307
Bsp1286I GDGCHC 1 cut(s) 541
Bsp143I GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
Bsp19I CCATGG 1 cut(s) 511
BspACI CCGC 8 cut(s) 152, 453, 468, 812, 1000, 1031, 1106, 1267
BspANI GGCC 4 cut(s) 773, 853, 1161, 1283
BspCNI CTCAG 1 cut(s) 19
BspHI TCATGA 2 cut(s) 259, 679
BspLI GGNNCC 4 cut(s) 24, 816, 963, 1080
BspPI GGATC 2 cut(s) 245, 671
BspT107I GGYRCC 3 cut(s) 22, 814, 1078
BspTI CTTAAG 1 cut(s) 622
BspTNI GGTCTC 1 cut(s) 1480
BsrDI GCAATG 2 cut(s) 180, 1504
BsrFI RCCGGY 4 cut(s) 808, 849, 979, 1075
BsrI ACTGG 4 cut(s) 897, 1097, 1237, 1432
BssAI RCCGGY 4 cut(s) 808, 849, 979, 1075
BssECI CCNNGG 2 cut(s) 511, 768
BssMI GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
BssNAI GTATAC 1 cut(s) 130
BssNI GRCGYC 4 cut(s) 23, 69, 149, 1006
BssT1I CCWWGG 1 cut(s) 511
Bst1107I GTATAC 1 cut(s) 130
Bst2UI CCWGG 3 cut(s) 953, 1295, 1319
Bst4CI ACNGT 3 cut(s) 1048, 1333, 1470
Bst6I CTCTTC 1 cut(s) 855
BstACI GRCGYC 4 cut(s) 23, 69, 149, 1006
BstAFI CTTAAG 1 cut(s) 622
BstAPI GCANNNNNTGC 1 cut(s) 335
BstC8I GCNNGC 4 cut(s) 41, 276, 1062, 1341
BstDEI CTNAG 2 cut(s) 27, 1372
BstDSI CCRYGG 2 cut(s) 511, 768
BstF5I GGATG 5 cut(s) 948, 1027, 1194, 1398, 1426
BstH2I RGCGCY 1 cut(s) 26
BstHHI GCGC 2 cut(s) 25, 657
BstKTI GATC 7 cut(s) 48, 211, 253, 305, 490, 589, 666
BstMAI GTCTC 1 cut(s) 1480
BstMBI GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
BstNI CCWGG 3 cut(s) 953, 1295, 1319
BstNSI RCATGY 2 cut(s) 278, 477
BstSCI CCNGG 4 cut(s) 833, 951, 1293, 1317
BstV1I GCAGC 1 cut(s) 1379
BstV2I GAAGAC 3 cut(s) 513, 1461, 1471
BstX2I RGATCY 3 cut(s) 208, 302, 663
BstYI RGATCY 3 cut(s) 208, 302, 663
BstZ17I GTATAC 1 cut(s) 130
BsuI GTATCC 1 cut(s) 1291
BsuRI GGCC 4 cut(s) 773, 853, 1161, 1283
BtgI CCRYGG 2 cut(s) 511, 768
BtrI CACGTC 4 cut(s) 1025, 1038, 1068, 1085
BtsCI GGATG 5 cut(s) 948, 1027, 1194, 1398, 1426
BtsI GCAGTG 2 cut(s) 664, 1009
BtsIMutI CAGTG 2 cut(s) 664, 1009
Cac8I GCNNGC 4 cut(s) 41, 276, 1062, 1341
CaiI CAGNNNCTG 1 cut(s) 1046
CciI TCATGA 2 cut(s) 259, 679
CfoI GCGC 2 cut(s) 25, 657
Cfr10I RCCGGY 4 cut(s) 808, 849, 979, 1075
Cfr13I GGNCC 2 cut(s) 772, 962
CseI GACGC 2 cut(s) 58, 157
Csp6I GTAC 4 cut(s) 423, 594, 1090, 1435
CspAI ACCGGT 2 cut(s) 979, 1075
CviAII CATG 9 cut(s) 145, 218, 260, 275, 474, 496, 512, 533, 680
CviQI GTAC 4 cut(s) 423, 594, 1090, 1435
DdeI CTNAG 2 cut(s) 27, 1372
DinI GGCGCC 1 cut(s) 24
DpnI GATC 7 cut(s) 47, 210, 252, 304, 489, 588, 665
DpnII GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
DriI GACNNNNNGTC 1 cut(s) 1472
EaeI YGGCCR 2 cut(s) 851, 1159
Eam1104I CTCTTC 1 cut(s) 855
Eam1105I GACNNNNNGTC 1 cut(s) 1472
EarI CTCTTC 1 cut(s) 855
EciI GGCGGA 3 cut(s) 468, 1020, 1256
Eco130I CCWWGG 1 cut(s) 511
Eco31I GGTCTC 1 cut(s) 1480
Eco32I GATATC 1 cut(s) 1244
Eco47I GGWCC 1 cut(s) 962
Eco57I CTGAAG 1 cut(s) 387
Eco88I CYCGRG 1 cut(s) 1307
EcoRII CCWGG 3 cut(s) 951, 1293, 1317
EcoRV GATATC 1 cut(s) 1244
EcoT14I CCWWGG 1 cut(s) 511
EcoT22I ATGCAT 2 cut(s) 59, 276
EgeI GGCGCC 1 cut(s) 24
EheI GGCGCC 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 511
FaeI CATG 9 cut(s) 148, 221, 263, 278, 477, 499, 515, 536, 683
FaqI GGGAC 1 cut(s) 975
FatI CATG 9 cut(s) 144, 217, 259, 274, 473, 495, 511, 532, 679
FbaI TGATCA 2 cut(s) 487, 586
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 4 cut(s) 14, 152, 1000, 1368
FokI GGATG 5 cut(s) 935, 1014, 1201, 1385, 1433
Fsp4HI GCNGC 4 cut(s) 14, 152, 1000, 1368
FspBI CTAG 4 cut(s) 570, 857, 945, 1526
GlaI GCGC 2 cut(s) 24, 656
GluI GCNGC 4 cut(s) 14, 152, 1000, 1368
GsuI CTGGAG 2 cut(s) 778, 1415
HaeII RGCGCY 1 cut(s) 26
HaeIII GGCC 4 cut(s) 773, 853, 1161, 1283
HapII CCGG 9 cut(s) 20, 809, 834, 850, 882, 980, 1076, 1158, 1171
HgaI GACGC 2 cut(s) 58, 157
HhaI GCGC 2 cut(s) 25, 657
Hin1I GRCGYC 4 cut(s) 23, 69, 149, 1006
Hin1II CATG 9 cut(s) 148, 221, 263, 278, 477, 499, 515, 536, 683
Hin6I GCGC 2 cut(s) 23, 655
HinP1I GCGC 2 cut(s) 23, 655
HincII GTYRAC 1 cut(s) 1071
HindII GTYRAC 1 cut(s) 1071
HindIII AAGCTT 2 cut(s) 122, 1347
HpaII CCGG 9 cut(s) 20, 809, 834, 850, 882, 980, 1076, 1158, 1171
HphI GGTGA 3 cut(s) 917, 994, 1095
Hpy166II GTNNAC 2 cut(s) 130, 1071
Hpy188I TCNGA 6 cut(s) 367, 400, 445, 604, 1122, 1416
Hpy188III TCNNGA 7 cut(s) 260, 542, 680, 803, 1239, 1259, 1307
Hpy8I GTNNAC 2 cut(s) 130, 1071
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 4 cut(s) 677, 758, 903, 978
HpyCH4III ACNGT 3 cut(s) 1048, 1333, 1470
HpyCH4IV ACGT 7 cut(s) 348, 1006, 1024, 1037, 1054, 1067, 1084
HpyCH4V TGCA 9 cut(s) 57, 224, 274, 278, 311, 329, 499, 578, 1051
HpyF3I CTNAG 2 cut(s) 27, 1372
HpySE526I ACGT 7 cut(s) 348, 1006, 1024, 1037, 1054, 1067, 1084
Hsp92I GRCGYC 4 cut(s) 23, 69, 149, 1006
Hsp92II CATG 9 cut(s) 148, 221, 263, 278, 477, 499, 515, 536, 683
HspAI GCGC 2 cut(s) 23, 655
KasI GGCGCC 1 cut(s) 22
Ksp22I TGATCA 2 cut(s) 487, 586
Kzo9I GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
LmnI GCTCC 3 cut(s) 100, 1222, 1434
Lsp1109I GCAGC 1 cut(s) 1379
LweI GCATC 2 cut(s) 400, 957
MaeI CTAG 4 cut(s) 570, 857, 945, 1526
MaeII ACGT 7 cut(s) 348, 1006, 1024, 1037, 1054, 1067, 1084
MaeIII GTNAC 6 cut(s) 231, 923, 1007, 1101, 1193, 1505
MalI GATC 7 cut(s) 47, 210, 252, 304, 489, 588, 665
MboI GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
MboII GAAGA 9 cut(s) 312, 380, 518, 603, 872, 1463, 1466, 1476, 1496
MfeI CAATTG 2 cut(s) 225, 615
MflI RGATCY 3 cut(s) 208, 302, 663
MhlI GDGCHC 1 cut(s) 541
MluCI AATT 8 cut(s) 225, 394, 436, 481, 615, 695, 1164, 1205
Mly113I GGCGCC 1 cut(s) 23
MlyI GAGTC 4 cut(s) 239, 626, 1402, 1502
MmeI TCCRAC 3 cut(s) 96, 926, 1145
Mph1103I ATGCAT 2 cut(s) 59, 276
MseI TTAA 2 cut(s) 378, 623
MslI CAYNNNNRTG 2 cut(s) 285, 1403
MspA1I CMGCKG 1 cut(s) 527
MspCI CTTAAG 1 cut(s) 622
MspI CCGG 9 cut(s) 20, 809, 834, 850, 882, 980, 1076, 1158, 1171
MspR9I CCNGG 4 cut(s) 835, 953, 1295, 1319
MunI CAATTG 2 cut(s) 225, 615
MvaI CCWGG 3 cut(s) 953, 1295, 1319
NarI GGCGCC 1 cut(s) 23
NciI CCSGG 1 cut(s) 835
NcoI CCATGG 1 cut(s) 511
NdeII GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
NlaIII CATG 9 cut(s) 148, 221, 263, 278, 477, 499, 515, 536, 683
NlaIV GGNNCC 4 cut(s) 24, 816, 963, 1080
NmuCI GTSAC 5 cut(s) 231, 923, 1007, 1101, 1505
NsiI ATGCAT 2 cut(s) 59, 276
NspI RCATGY 2 cut(s) 278, 477
PaeI GCATGC 1 cut(s) 278
PaeR7I CTCGAG 1 cut(s) 1307
PagI TCATGA 2 cut(s) 259, 679
PciI ACATGT 1 cut(s) 473
PfeI GAWTC 6 cut(s) 85, 342, 674, 941, 1303, 1424
PfoI TCCNGGA 2 cut(s) 951, 1293
PinAI ACCGGT 2 cut(s) 979, 1075
PkrI GCNGC 4 cut(s) 15, 153, 1001, 1369
PleI GAGTC 4 cut(s) 238, 626, 1402, 1502
PluTI GGCGCC 1 cut(s) 26
PpsI GAGTC 4 cut(s) 238, 626, 1402, 1502
PscI ACATGT 1 cut(s) 473
Psp6I CCWGG 3 cut(s) 951, 1293, 1317
PspGI CCWGG 3 cut(s) 951, 1293, 1317
PspN4I GGNNCC 4 cut(s) 24, 816, 963, 1080
PspPI GGNCC 2 cut(s) 772, 962
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 3 cut(s) 208, 302, 663
PvuII CAGCTG 1 cut(s) 527
RsaI GTAC 4 cut(s) 424, 595, 1091, 1436
RsaNI GTAC 4 cut(s) 423, 594, 1090, 1435
RseI CAYNNNNRTG 2 cut(s) 285, 1403
SaqAI TTAA 2 cut(s) 378, 623
SatI GCNGC 4 cut(s) 14, 152, 1000, 1368
Sau3AI GATC 7 cut(s) 45, 208, 250, 302, 487, 586, 663
Sau96I GGNCC 2 cut(s) 772, 962
ScaI AGTACT 1 cut(s) 1091
SchI GAGTC 4 cut(s) 239, 626, 1402, 1502
ScrFI CCNGG 4 cut(s) 835, 953, 1295, 1319
SduI GDGCHC 1 cut(s) 541
SfaNI GCATC 2 cut(s) 400, 957
SfoI GGCGCC 1 cut(s) 24
Sfr274I CTCGAG 1 cut(s) 1307
SgrAI CRCCGGYG 1 cut(s) 1075
SinI GGWCC 1 cut(s) 962
SlaI CTCGAG 1 cut(s) 1307
SmiMI CAYNNNNRTG 2 cut(s) 285, 1403
SmlI CTYRAG 5 cut(s) 540, 622, 1277, 1307, 1344
SmoI CTYRAG 5 cut(s) 540, 622, 1277, 1307, 1344
SphI GCATGC 1 cut(s) 278
Sse9I AATT 8 cut(s) 225, 394, 436, 481, 615, 695, 1164, 1205
SsiI CCGC 8 cut(s) 152, 453, 468, 812, 1000, 1031, 1106, 1267
SspDI GGCGCC 1 cut(s) 22
SspMI CTAG 4 cut(s) 570, 857, 945, 1526
StyD4I CCNGG 4 cut(s) 833, 951, 1293, 1317
StyI CCWWGG 1 cut(s) 511
TaaI ACNGT 3 cut(s) 1048, 1333, 1470
TaiI ACGT 7 cut(s) 351, 1009, 1027, 1040, 1057, 1070, 1087
TaqI TCGA 5 cut(s) 48, 83, 285, 1308, 1482
TasI AATT 8 cut(s) 225, 394, 436, 481, 615, 695, 1164, 1205
TatI WGTACW 1 cut(s) 1089
TauI GCSGC 2 cut(s) 154, 1002
TfiI GAWTC 6 cut(s) 85, 342, 674, 941, 1303, 1424
Tru1I TTAA 2 cut(s) 378, 623
Tru9I TTAA 2 cut(s) 378, 623
TscAI CASTG 2 cut(s) 664, 1016
TseFI GTSAC 5 cut(s) 231, 923, 1007, 1101, 1505
TseI GCWGC 2 cut(s) 13, 1367
Tsp45I GTSAC 5 cut(s) 231, 923, 1007, 1101, 1505
TspGWI ACGGA 1 cut(s) 1493
TspRI CASTG 2 cut(s) 664, 1016
Vha464I CTTAAG 1 cut(s) 622
VpaK11BI GGWCC 1 cut(s) 962
XapI RAATTY 1 cut(s) 1164
XceI RCATGY 2 cut(s) 278, 477
XcmI CCANNNNNNNNNTGG 2 cut(s) 261, 1089
XhoI CTCGAG 1 cut(s) 1307
XmiI GTMKAC 1 cut(s) 129
XspI CTAG 4 cut(s) 570, 857, 945, 1526
ZraI GACGTC 1 cut(s) 1007
ZrmI AGTACT 1 cut(s) 1091
Zsp2I ATGCAT 2 cut(s) 59, 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.