Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002322.1

Orthogroup ID

OG0000220

Physical Location & Seq

Genomic Coordinates Forward (+)

132530 .. 138845

Gene Structure 6316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002322.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

atgtctgcacacctcgataatgaagctggaagacctcttccacaagttgtagaaactgcaactaatgctggaatcaacgtagagagagttttatctgaagaagttgttaaaaactcagaagataattcagatagtgatgatgcgtggggtgatacagcaactccagatagttctgataatggtggagagggtggaagcggaacaggtggtggaggtgaaagatataaatatagacaatcttctgtggatgaaggattcgaatttacctgtgaaggtaattttgatcatgccactcaagatgaagaccacggagtgagaacagctggtcatggtgctcaagagaagacccgatatgggaggaggactagaggtgcaactgatgatcaaagtaccccatctgatgtttcttcaattgccttaagttttgactctatcagtttaggcacagagcgcagtgggatctcaaatgaatctcatgaaagcaacaatcaatttgaccaaaaaacaagtccaactcttcttcagtcatcgtcaccttctccaatcgagaaagggctcatggcggagagcacaagtggaggctgtggagggattgagaaaatactcaataaagcaacccatcaatggctagccccggaagaagtagacttacttattcaaaattttgagaaaataacaattagtgaccaacgtccggtgaagccagaaagtggatcgatttttttttatgtcaagaagaagaagctccattacctacaggatggctataagtggaagaaaacagatgcgggaagatcggggaagttttccaacgaaaagctaaagattgcaggcaaagaggagttgcgctgttactatgcccatggagaagaagatgaaaaatttactagacgatggtattcactgattgaaaagccagggccacccaatctccccgacattattgacagatcaaaaagagttgtcgtccactacctgtatgacgagacctatatacctaagcgtcagaaaggaagcaagaataggtccgaagtggttcctgaactggataaggatctcaaggtcaagcgctctaggacatctgagagttgttctacagagattgtggaactaactgaagatgcagaagaactccatgagttggtggaaagtcaagaagcaacagacatggaggagctcaagggggttgcgagggcacctgccagtccctcagtggctctgccacagcaaccaatcccatcggttgatcaggaatctttacaagcttccgaagacactggagtaactttacccggaactttaccctgtcttcttcagcaaattaatgaacctgagcaaggtgaactgttggatgactgggatccctgcgttatgtctttgcaaacagatttagagggatatggaggcggtaggggcggttggggatatggaggcggtaggggcggtggggtatatgaaggcggtgaattcttacgtacctcaaagcaacgttgccagggttttgttaataacatagatgagatgtcgcgtatccccagaagaagcatgtcgaggaaaaaatgtggaatgtggttccgggccgtacaacgggcttttctatgttgcagccttaaaggaattgggttgcgttggaaaccaaaagggagatgtgtgggccatcccagcttgaaaatttcgtcctcaaagtggggtatgtgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071275 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 CG-1 IQ TIG

Protein Analysis

566

Amino Acids

62.41

Weight (kDa)

5.33

Isoelectric Point (pI)

59.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000220)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica	MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica	Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis	pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis	RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata	RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora	Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii	Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa	Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha	Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana	Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1207
Acc36I	ACCTGC	1 cut(s)	1207
AccB1I	GGYRCC	1 cut(s)	1195
AccB7I	CCANNNNNTGG	2 cut(s)	710, 1141
AccI	GTMKAC	1 cut(s)	645
AccII	CGCG	1 cut(s)	1528
AciI	CCGC	8 cut(s)	198, 563, 788, 1407, 1416, 1434, 1443, 1461
AclI	AACGTT	1 cut(s)	1489
AclWI	GGATC	5 cut(s)	467, 721, 1062, 1355, 1368
AcsI	RAATTY	5 cut(s)	260, 661, 881, 1466, 1671
AcuI	CTGAAG	4 cut(s)	117, 506, 1137, 1298
AdeI	CACNNNGTG	1 cut(s)	313
AfaI	GTAC	3 cut(s)	391, 1477, 1584
AfeI	AGCGCT	1 cut(s)	1070
AfiI	CCNNNNNNNGG	8 cut(s)	354, 624, 694, 710, 1141, 1337, 1587, 1686
AflII	CTTAAG	1 cut(s)	418
AgsI	TTSAA	4 cut(s)	411, 659, 911, 1669
AjnI	CCWGG	2 cut(s)	916, 1494
AluBI	AGCT	7 cut(s)	26, 323, 745, 820, 1177, 1265, 1665
AluI	AGCT	7 cut(s)	26, 323, 745, 820, 1177, 1265, 1665
Alw21I	GWGCWC	3 cut(s)	337, 572, 1179
Alw26I	GTCTC	1 cut(s)	980
AlwI	GGATC	5 cut(s)	467, 721, 1062, 1355, 1368
Aor51HI	AGCGCT	1 cut(s)	1070
AoxI	GGCC	3 cut(s)	920, 1578, 1654
ApeKI	GCWGC	1 cut(s)	1605
ApoI	RAATTY	5 cut(s)	260, 661, 881, 1466, 1671
ArsI	GACNNNNNNTTYG	2 cut(s)	493, 525
AseI	ATTAAT	1 cut(s)	1323
Asp700I	GAANNNNTTC	1 cut(s)	1035
AspLEI	GCGC	3 cut(s)	453, 849, 1071
AspS9I	GGNCC	4 cut(s)	920, 1026, 1578, 1654
AsuC2I	CCSGG	3 cut(s)	635, 1293, 1577
AsuHPI	GGTGA	6 cut(s)	161, 227, 525, 709, 1352, 1475
AsuII	TTCGAA	1 cut(s)	258
AsuNHI	GCTAGC	1 cut(s)	628
AvaII	GGWCC	1 cut(s)	1026
BaeGI	GKGCMC	1 cut(s)	1198
BamHI	GGATCC	1 cut(s)	1360
BanI	GGYRCC	1 cut(s)	1195
BanII	GRGCYC	2 cut(s)	558, 1179
BarI	GAAGNNNNNNTAC	4 cut(s)	633, 665, 734, 766
BbsI	GAAGAC	5 cut(s)	37, 309, 350, 1278, 1301
Bbv12I	GWGCWC	3 cut(s)	337, 572, 1179
BbvI	GCAGC	1 cut(s)	1617
BccI	CCATC	6 cut(s)	403, 627, 755, 888, 1246, 1665
BceAI	ACGGC	1 cut(s)	1565
BciT130I	CCWGG	2 cut(s)	918, 1496
BciVI	GTATCC	1 cut(s)	1541
BclI	TGATCA	3 cut(s)	283, 382, 1246
BcnI	CCSGG	3 cut(s)	635, 1293, 1577
BcoDI	GTCTC	1 cut(s)	980
BfaI	CTAG	4 cut(s)	366, 629, 888, 1074
BfmI	CTRYAG	2 cut(s)	755, 1095
BfoI	RGCGCY	1 cut(s)	1072
BfrI	CTTAAG	1 cut(s)	418
BfuAI	ACCTGC	1 cut(s)	1207
BfuI	GTATCC	1 cut(s)	1541
BisI	GCNGC	1 cut(s)	1606
BlsI	GCNGC	1 cut(s)	1607
Bme1390I	CCNGG	5 cut(s)	635, 918, 1293, 1496, 1577
Bme18I	GGWCC	1 cut(s)	1026
BmgT120I	GGNCC	4 cut(s)	920, 1026, 1578, 1654
BmiI	GGNNCC	4 cut(s)	1038, 1197, 1362, 1574
BmrFI	CCNGG	5 cut(s)	635, 918, 1293, 1496, 1577
BmrI	ACTGGG	1 cut(s)	1366
BmsI	GCATC	3 cut(s)	130, 775, 1111
BmtI	GCTAGC	1 cut(s)	632
BmuI	ACTGGG	1 cut(s)	1366
BoxI	GACNNNNGTC	1 cut(s)	690
BpiI	GAAGAC	5 cut(s)	37, 309, 350, 1278, 1301
BpmI	CTGGAG	2 cut(s)	147, 1299
Bpu10I	CCTNAGC	2 cut(s)	999, 1332
Bpu14I	TTCGAA	1 cut(s)	258
BpuEI	CTTGAG	4 cut(s)	279, 321, 1043, 1163
BpuMI	CCSGG	3 cut(s)	635, 1293, 1577
Bsa29I	ATCGAT	1 cut(s)	716
BsaAI	YACGTR	1 cut(s)	1475
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaI	GGTCTC	1 cut(s)	980
BsaJI	CCNNGG	5 cut(s)	307, 633, 862, 917, 1495
BsaWI	WCCGGW	1 cut(s)	694
BsaXI	ACNNNNNCTCC	4 cut(s)	145, 175, 915, 945
Bsc4I	CCNNNNNNNGG	8 cut(s)	354, 624, 694, 710, 1141, 1337, 1587, 1686
Bse1I	ACTGG	4 cut(s)	1050, 1203, 1282, 1361
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	2 cut(s)	918, 1496
BseCI	ATCGAT	1 cut(s)	716
BseDI	CCNNGG	5 cut(s)	307, 633, 862, 917, 1495
BseGI	GGATG	4 cut(s)	253, 766, 1357, 1657
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	8 cut(s)	354, 624, 694, 710, 1141, 1337, 1587, 1686
BseMII	CTCAG	4 cut(s)	129, 1074, 1224, 1323
BseNI	ACTGG	4 cut(s)	1050, 1203, 1282, 1361
BseRI	GAGGAG	3 cut(s)	373, 854, 1187
BseSI	GKGCMC	1 cut(s)	1198
BseXI	GCAGC	1 cut(s)	1617
BseYI	CCCAGC	1 cut(s)	1661
Bsh1236I	CGCG	1 cut(s)	1528
BshFI	GGCC	3 cut(s)	922, 1580, 1656
BshNI	GGYRCC	1 cut(s)	1195
BshVI	ATCGAT	1 cut(s)	716
BsiHKAI	GWGCWC	3 cut(s)	337, 572, 1179
BsiSI	CCGG	4 cut(s)	635, 695, 1293, 1576
BslFI	GGGAC	1 cut(s)	1191
BslI	CCNNNNNNNGG	8 cut(s)	354, 624, 694, 710, 1141, 1337, 1587, 1686
BsmAI	GTCTC	1 cut(s)	980
BsmFI	GGGAC	1 cut(s)	1191
BsnI	GGCC	3 cut(s)	922, 1580, 1656
Bso31I	GGTCTC	1 cut(s)	980
Bsp119I	TTCGAA	1 cut(s)	258
Bsp1286I	GDGCHC	5 cut(s)	337, 558, 572, 1179, 1198
Bsp143I	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
Bsp19I	CCATGG	1 cut(s)	862
BspACI	CCGC	8 cut(s)	198, 563, 788, 1407, 1416, 1434, 1443, 1461
BspANI	GGCC	3 cut(s)	922, 1580, 1656
BspCNI	CTCAG	4 cut(s)	128, 1075, 1223, 1324
BspDI	ATCGAT	1 cut(s)	716
BspFNI	CGCG	1 cut(s)	1528
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	4 cut(s)	1038, 1197, 1362, 1574
BspMI	ACCTGC	1 cut(s)	1207
BspOI	GCTAGC	1 cut(s)	632
BspPI	GGATC	5 cut(s)	467, 721, 1062, 1355, 1368
BspT104I	TTCGAA	1 cut(s)	258
BspT107I	GGYRCC	1 cut(s)	1195
BspTI	CTTAAG	1 cut(s)	418
BspTNI	GGTCTC	1 cut(s)	980
BsrI	ACTGG	4 cut(s)	1050, 1203, 1282, 1361
BssECI	CCNNGG	5 cut(s)	307, 633, 862, 917, 1495
BssMI	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
BssT1I	CCWWGG	1 cut(s)	862
Bst2UI	CCWGG	2 cut(s)	918, 1496
Bst4CI	ACNGT	1 cut(s)	1347
Bst6I	CTCTTC	2 cut(s)	42, 522
BstAFI	CTTAAG	1 cut(s)	418
BstAPI	GCANNNNNTGC	1 cut(s)	65
BstBAI	YACGTR	1 cut(s)	1475
BstBI	TTCGAA	1 cut(s)	258
BstC8I	GCNNGC	2 cut(s)	630, 832
BstDEI	CTNAG	5 cut(s)	115, 999, 1083, 1210, 1332
BstDSI	CCRYGG	2 cut(s)	307, 862
BstENI	CCTNNNNNAGG	1 cut(s)	1335
BstF5I	GGATG	4 cut(s)	253, 766, 1357, 1657
BstFNI	CGCG	1 cut(s)	1528
BstH2I	RGCGCY	1 cut(s)	1072
BstHHI	GCGC	3 cut(s)	453, 849, 1071
BstKTI	GATC	9 cut(s)	286, 385, 462, 716, 797, 953, 1057, 1249, 1363
BstMAI	GTCTC	1 cut(s)	980
BstMBI	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
BstMWI	GCNNNNNNNGC	5 cut(s)	65, 450, 1413, 1440, 1662
BstNI	CCWGG	2 cut(s)	918, 1496
BstNSI	RCATGY	1 cut(s)	1549
BstPAI	GACNNNNGTC	1 cut(s)	690
BstSCI	CCNGG	5 cut(s)	633, 916, 1291, 1494, 1575
BstSFI	CTRYAG	2 cut(s)	755, 1095
BstSLI	GKGCMC	1 cut(s)	1198
BstSNI	TACGTA	1 cut(s)	1475
BstUI	CGCG	1 cut(s)	1528
BstV1I	GCAGC	1 cut(s)	1617
BstV2I	GAAGAC	5 cut(s)	37, 309, 350, 1278, 1301
BstX2I	RGATCY	3 cut(s)	459, 1054, 1360
BstYI	RGATCY	3 cut(s)	459, 1054, 1360
Bsu15I	ATCGAT	1 cut(s)	716
BsuI	GTATCC	1 cut(s)	1541
BsuRI	GGCC	3 cut(s)	922, 1580, 1656
BsuTUI	ATCGAT	1 cut(s)	716
BtgI	CCRYGG	2 cut(s)	307, 862
BtsCI	GGATG	4 cut(s)	253, 766, 1357, 1657
BtsI	GCAGTG	1 cut(s)	460
BtsIMutI	CAGTG	4 cut(s)	460, 902, 1218, 1275
BveI	ACCTGC	1 cut(s)	1207
Cac8I	GCNNGC	2 cut(s)	630, 832
CciI	TCATGA	1 cut(s)	475
CfoI	GCGC	3 cut(s)	453, 849, 1071
Cfr13I	GGNCC	4 cut(s)	920, 1026, 1578, 1654
ClaI	ATCGAT	1 cut(s)	716
CseI	GACGC	1 cut(s)	992
Csp6I	GTAC	3 cut(s)	390, 1476, 1583
CviAII	CATG	8 cut(s)	287, 329, 476, 559, 863, 1136, 1168, 1546
CviQI	GTAC	3 cut(s)	390, 1476, 1583
DdeI	CTNAG	5 cut(s)	115, 999, 1083, 1210, 1332
DpnI	GATC	9 cut(s)	285, 384, 461, 715, 796, 952, 1056, 1248, 1362
DpnII	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
DraIII	CACNNNGTG	1 cut(s)	313
Eam1104I	CTCTTC	2 cut(s)	42, 522
EarI	CTCTTC	2 cut(s)	42, 522
EciI	GGCGGA	1 cut(s)	578
Ecl136II	GAGCTC	1 cut(s)	1177
Eco105I	TACGTA	1 cut(s)	1475
Eco130I	CCWWGG	1 cut(s)	862
Eco24I	GRGCYC	2 cut(s)	558, 1179
Eco31I	GGTCTC	1 cut(s)	980
Eco47I	GGWCC	1 cut(s)	1026
Eco47III	AGCGCT	1 cut(s)	1070
Eco53kI	GAGCTC	1 cut(s)	1177
Eco57I	CTGAAG	4 cut(s)	117, 506, 1137, 1298
EcoICRI	GAGCTC	1 cut(s)	1177
EcoNI	CCTNNNNNAGG	1 cut(s)	1335
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	2 cut(s)	916, 1494
EcoT14I	CCWWGG	1 cut(s)	862
EcoT38I	GRGCYC	2 cut(s)	558, 1179
ErhI	CCWWGG	1 cut(s)	862
FaeI	CATG	8 cut(s)	290, 332, 479, 562, 866, 1139, 1171, 1549
FaqI	GGGAC	1 cut(s)	1191
FatI	CATG	8 cut(s)	286, 328, 475, 558, 862, 1135, 1167, 1545
FauI	CCCGC	1 cut(s)	781
FbaI	TGATCA	3 cut(s)	283, 382, 1246
FblI	GTMKAC	1 cut(s)	645
Fnu4HI	GCNGC	1 cut(s)	1606
FokI	GGATG	4 cut(s)	260, 773, 1364, 1644
FriOI	GRGCYC	2 cut(s)	558, 1179
Fsp4HI	GCNGC	1 cut(s)	1606
FspBI	CTAG	4 cut(s)	366, 629, 888, 1074
GlaI	GCGC	3 cut(s)	452, 848, 1070
GluI	GCNGC	1 cut(s)	1606
GsaI	CCCAGC	1 cut(s)	1665
GsuI	CTGGAG	2 cut(s)	147, 1299
HaeII	RGCGCY	1 cut(s)	1072
HaeIII	GGCC	3 cut(s)	922, 1580, 1656
HapII	CCGG	4 cut(s)	635, 695, 1293, 1576
HgaI	GACGC	1 cut(s)	992
HhaI	GCGC	3 cut(s)	453, 849, 1071
Hin1II	CATG	8 cut(s)	290, 332, 479, 562, 866, 1139, 1171, 1549
Hin6I	GCGC	3 cut(s)	451, 847, 1069
HinP1I	GCGC	3 cut(s)	451, 847, 1069
HindIII	AAGCTT	1 cut(s)	1263
HinfI	GANTC	5 cut(s)	72, 255, 428, 470, 1253
HpaII	CCGG	4 cut(s)	635, 695, 1293, 1576
HphI	GGTGA	6 cut(s)	161, 227, 525, 709, 1352, 1475
Hpy166II	GTNNAC	3 cut(s)	646, 970, 1343
Hpy188I	TCNGA	9 cut(s)	97, 118, 130, 175, 400, 1008, 1030, 1084, 1270
Hpy188III	TCNNGA	9 cut(s)	164, 296, 338, 476, 547, 733, 1040, 1154, 1250
Hpy8I	GTNNAC	3 cut(s)	646, 970, 1343
HpyAV	CCTTC	4 cut(s)	245, 266, 546, 1451
HpyCH4III	ACNGT	1 cut(s)	1347
HpyCH4IV	ACGT	4 cut(s)	78, 691, 1474, 1489
HpyCH4V	TGCA	7 cut(s)	8, 59, 374, 830, 1124, 1381, 1605
HpyF10VI	GCNNNNNNNGC	5 cut(s)	65, 450, 1413, 1440, 1662
HpyF3I	CTNAG	5 cut(s)	115, 999, 1083, 1210, 1332
HpySE526I	ACGT	4 cut(s)	78, 691, 1474, 1489
Hsp92II	CATG	8 cut(s)	290, 332, 479, 562, 866, 1139, 1171, 1549
HspAI	GCGC	3 cut(s)	451, 847, 1069
Ksp22I	TGATCA	3 cut(s)	283, 382, 1246
Kzo9I	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
LmnI	GCTCC	2 cut(s)	750, 1174
Lsp1109I	GCAGC	1 cut(s)	1617
LweI	GCATC	3 cut(s)	130, 775, 1111
MaeI	CTAG	4 cut(s)	366, 629, 888, 1074
MaeII	ACGT	4 cut(s)	78, 691, 1474, 1489
MaeIII	GTNAC	4 cut(s)	531, 683, 851, 1282
MalI	GATC	9 cut(s)	285, 384, 461, 715, 796, 952, 1056, 1248, 1362
MboI	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
MfeI	CAATTG	1 cut(s)	411
MflI	RGATCY	3 cut(s)	459, 1054, 1360
MhlI	GDGCHC	5 cut(s)	337, 558, 572, 1179, 1198
MlyI	GAGTC	1 cut(s)	422
MmeI	TCCRAC	4 cut(s)	536, 834, 1329, 1610
MroXI	GAANNNNTTC	1 cut(s)	1035
MseI	TTAA	5 cut(s)	108, 419, 1323, 1506, 1611
MspA1I	CMGCKG	1 cut(s)	323
MspCI	CTTAAG	1 cut(s)	418
MspI	CCGG	4 cut(s)	635, 695, 1293, 1576
MspR9I	CCNGG	5 cut(s)	635, 918, 1293, 1496, 1577
MunI	CAATTG	1 cut(s)	411
MvaI	CCWGG	2 cut(s)	918, 1496
MvnI	CGCG	1 cut(s)	1528
MwoI	GCNNNNNNNGC	5 cut(s)	65, 450, 1413, 1440, 1662
NciI	CCSGG	3 cut(s)	635, 1293, 1577
NcoI	CCATGG	1 cut(s)	862
NdeII	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
NheI	GCTAGC	1 cut(s)	628
NlaIII	CATG	8 cut(s)	290, 332, 479, 562, 866, 1139, 1171, 1549
NlaIV	GGNNCC	4 cut(s)	1038, 1197, 1362, 1574
NmuCI	GTSAC	2 cut(s)	531, 683
NspI	RCATGY	1 cut(s)	1549
NspV	TTCGAA	1 cut(s)	258
PagI	TCATGA	1 cut(s)	475
PaqCI	CACCTGC	1 cut(s)	1207
PdmI	GAANNNNTTC	1 cut(s)	1035
PfeI	GAWTC	4 cut(s)	72, 255, 470, 1253
PflMI	CCANNNNNTGG	2 cut(s)	710, 1141
PkrI	GCNGC	1 cut(s)	1607
PleI	GAGTC	1 cut(s)	422
PpsI	GAGTC	1 cut(s)	422
Ppu21I	YACGTR	1 cut(s)	1475
PshAI	GACNNNNGTC	1 cut(s)	690
PshBI	ATTAAT	1 cut(s)	1323
Psp124BI	GAGCTC	1 cut(s)	1179
Psp1406I	AACGTT	1 cut(s)	1489
Psp6I	CCWGG	2 cut(s)	916, 1494
PspFI	CCCAGC	1 cut(s)	1661
PspGI	CCWGG	2 cut(s)	916, 1494
PspN4I	GGNNCC	4 cut(s)	1038, 1197, 1362, 1574
PspPI	GGNCC	4 cut(s)	920, 1026, 1578, 1654
PsuI	RGATCY	3 cut(s)	459, 1054, 1360
PvuII	CAGCTG	1 cut(s)	323
RsaI	GTAC	3 cut(s)	391, 1477, 1584
RsaNI	GTAC	3 cut(s)	390, 1476, 1583
SacI	GAGCTC	1 cut(s)	1179
SaqAI	TTAA	5 cut(s)	108, 419, 1323, 1506, 1611
SatI	GCNGC	1 cut(s)	1606
Sau3AI	GATC	9 cut(s)	283, 382, 459, 713, 794, 950, 1054, 1246, 1360
Sau96I	GGNCC	4 cut(s)	920, 1026, 1578, 1654
SchI	GAGTC	1 cut(s)	422
ScrFI	CCNGG	5 cut(s)	635, 918, 1293, 1496, 1577
SduI	GDGCHC	5 cut(s)	337, 558, 572, 1179, 1198
SfaNI	GCATC	3 cut(s)	130, 775, 1111
SfcI	CTRYAG	2 cut(s)	755, 1095
SfuI	TTCGAA	1 cut(s)	258
SinI	GGWCC	1 cut(s)	1026
SmlI	CTYRAG	5 cut(s)	294, 336, 418, 1058, 1178
SmoI	CTYRAG	5 cut(s)	294, 336, 418, 1058, 1178
SnaBI	TACGTA	1 cut(s)	1475
SsiI	CCGC	8 cut(s)	198, 563, 788, 1407, 1416, 1434, 1443, 1461
SspMI	CTAG	4 cut(s)	366, 629, 888, 1074
SstI	GAGCTC	1 cut(s)	1179
StyD4I	CCNGG	5 cut(s)	633, 916, 1291, 1494, 1575
StyI	CCWWGG	1 cut(s)	862
TaaI	ACNGT	1 cut(s)	1347
TaiI	ACGT	4 cut(s)	81, 694, 1477, 1492
TaqI	TCGA	5 cut(s)	15, 258, 546, 716, 1550
TfiI	GAWTC	4 cut(s)	72, 255, 470, 1253
Tru1I	TTAA	5 cut(s)	108, 419, 1323, 1506, 1611
Tru9I	TTAA	5 cut(s)	108, 419, 1323, 1506, 1611
TscAI	CASTG	4 cut(s)	460, 909, 1218, 1282
TseFI	GTSAC	2 cut(s)	531, 683
TseI	GCWGC	1 cut(s)	1605
Tsp45I	GTSAC	2 cut(s)	531, 683
TspDTI	ATGAA	8 cut(s)	36, 264, 315, 483, 492, 891, 1341, 1470
TspGWI	ACGGA	1 cut(s)	324
TspRI	CASTG	4 cut(s)	460, 909, 1218, 1282
Van91I	CCANNNNNTGG	2 cut(s)	710, 1141
Vha464I	CTTAAG	1 cut(s)	418
VpaK11BI	GGWCC	1 cut(s)	1026
VspI	ATTAAT	1 cut(s)	1323
XagI	CCTNNNNNAGG	1 cut(s)	1335
XapI	RAATTY	5 cut(s)	260, 661, 881, 1466, 1671
XceI	RCATGY	1 cut(s)	1549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1210
XmiI	GTMKAC	1 cut(s)	645
XmnI	GAANNNNTTC	1 cut(s)	1035
XspI	CTAG	4 cut(s)	366, 629, 888, 1074

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.