Rorug03G0200600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000220
Physical Location & Seq
Forward (+)
17681310 .. 17683367
2058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0200600.1

Sequence Viewer

Length: 1413 bp
ATGGGCCGGCACGAGCCCGGCACGATAATAAATGGGTCAGCCCAAGCACGACTAGGCCCGCTTAAAATGGGCCGGGCCGGGTCCGGCCCGACCCATGCCGAGAATTTTGATGGATTTTCCTGGAAGGACTTACGGACTTATGATAAGAGGTTGAGGTTGAGGTTGTGGAGTTATTTGGATAGGTACTTGTTTCATCGTGGGGTTAATAGGATAGAGCGCTTTTGTATTTACTGGGAACTTCACTATGCGGACCAACAACAAAGCTTACTTGAAGATGAGAGATTTCGTTTGGACAAATGGATCTACAACATAAGGTATAATGTTGAATTCCTTGACATCAAGTATTTGGGTTGGGAGGCACTGCTCTTTCCTCCTTGCGTCTTACTTGGTGGATCTTTGAAATCTCTCTCTGTGCATATGAATGGTATGATTTTTAAAGCACCCTCACTCGCTTCTTTCTCTAATCTGGAATGCTTGAAGTTGCAAGGTGTTATTCTAGTAGATGAGGGGCTTTTCAAATGGATCTCGTGTTCATGCAAATGCATTAAGGAATTGTCTCTTAAACATGTTTGTGGGAAGGGGACAAAGAATGTCACTATTGAAGCACATCTTTGGAATCATATATTGTGCATTGAATGGGTTTCTAGTATCTGTTATCTTTACATTACCGGTGAGAAACTTAGAAAAATAACTATCGACTGGAGATTTGGCTTACTTACAGACAAACCACATACAGATAAATCATTAAATATCTGTGCTCCGAATCTCAACAGTTTAAACTGGACCGGGAGTTTGATGAATCAACCTAACCTTGGAAGATTAGAATGTTTAGAAGAAGCTAAGATTTGTCTTCTGCCTAGTGATGATGATTTTGTCTATGTATCTGAGGTTCTTTCCTGCTTATCCAGTGCTAAAGTTCTCACACTGAACGACGAGACTACGATGGTTCTGTTCAAGGGAAGTTCCATGCCATTGCTAAAGAATGTTTGTTATTTGTGTATTCATATTGAAGGCTTTCTTGATATTCCAGTCCCTGCAATGACCTCTCTTTTGGGAGGAATGTCTAAGTTGAGTACATTAATCATAAAGTCTGACTCTTTCTTCCGTGGCCTTCAAGCTGATTGTCGTGGGTTTAATATGGGATACTGGAAGCTGCAATACACTGCTTTTATTTATCAGCTCAAGGAGGTTACCATAGAGCTTTCCCATGGGTCTAACGGAATCCAGTTTGCAAGATATATCCTTGAACATGCTCAGAATTTGAATAAAATGACACTTGTGCATTCACCACAGCAGTCTAATGCTATGAGTAAGTTAAAGAAAAGCAAGATGGCTTCCAACATCACACTGGACTTTCAGGAAGATCAAGAAAGAGGGCCTCAGAAACGAAGAAGAAGAAGAAGGGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

470

Amino Acids

53.94

Weight (kDa)

8.98

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 59, 248
AclWI GGATC 3 cut(s) 308, 400, 530
AcsI RAATTY 3 cut(s) 103, 326, 1258
AfaI GTAC 2 cut(s) 185, 1075
AfeI AGCGCT 1 cut(s) 218
AfiI CCNNNNNNNGG 1 cut(s) 812
AflIII ACRYGT 1 cut(s) 565
AgeI ACCGGT 1 cut(s) 668
AjnI CCWGG 1 cut(s) 119
AloI GAACNNNNNNTCC 2 cut(s) 514, 546
AluBI AGCT 6 cut(s) 264, 839, 1118, 1153, 1180, 1201
AluI AGCT 6 cut(s) 264, 839, 1118, 1153, 1180, 1201
Alw21I GWGCWC 1 cut(s) 760
Alw26I GTCTC 2 cut(s) 561, 929
AlwI GGATC 3 cut(s) 308, 400, 530
AlwNI CAGNNNCTG 1 cut(s) 1034
Aor51HI AGCGCT 1 cut(s) 218
AoxI GGCC 7 cut(s) 4, 55, 70, 75, 85, 1108, 1376
ApeKI GCWGC 1 cut(s) 1153
ApoI RAATTY 3 cut(s) 103, 326, 1258
ArsI GACNNNNNNTTYG 6 cut(s) 689, 721, 775, 807, 1033, 1065
AseI ATTAAT 1 cut(s) 1079
AsiGI ACCGGT 1 cut(s) 668
Asp700I GAANNNNTTC 1 cut(s) 1014
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 9 cut(s) 4, 56, 70, 75, 81, 86, 250, 783, 1376
AsuC2I CCSGG 4 cut(s) 18, 74, 79, 787
AsuHPI GGTGA 2 cut(s) 683, 1278
AvaII GGWCC 3 cut(s) 81, 250, 783
BanII GRGCYC 1 cut(s) 18
BarI GAAGNNNNNNTAC 2 cut(s) 1142, 1174
BauI CACGAG 2 cut(s) 11, 526
BbsI GAAGAC 1 cut(s) 842
Bbv12I GWGCWC 1 cut(s) 760
BbvI GCAGC 1 cut(s) 1140
BccI CCATC 3 cut(s) 104, 937, 1324
BciT130I CCWGG 1 cut(s) 121
BciVI GTATCC 1 cut(s) 1136
BcnI CCSGG 4 cut(s) 18, 74, 79, 787
BcoDI GTCTC 2 cut(s) 561, 929
BfaI CTAG 4 cut(s) 53, 497, 645, 858
BfoI RGCGCY 1 cut(s) 220
BfuI GTATCC 1 cut(s) 1136
BisI GCNGC 1 cut(s) 1154
BlsI GCNGC 1 cut(s) 1155
Bme1390I CCNGG 5 cut(s) 18, 74, 79, 121, 787
Bme18I GGWCC 3 cut(s) 81, 250, 783
BmgT120I GGNCC 9 cut(s) 4, 56, 70, 75, 81, 86, 250, 783, 1376
BmiI GGNNCC 1 cut(s) 82
BmrFI CCNGG 5 cut(s) 18, 74, 79, 121, 787
BmrI ACTGGG 1 cut(s) 241
BmuI ACTGGG 1 cut(s) 241
BpiI GAAGAC 1 cut(s) 842
BpmI CTGGAG 1 cut(s) 721
BpuEI CTTGAG 1 cut(s) 1166
BpuMI CCSGG 4 cut(s) 18, 74, 79, 787
BsaJI CCNNGG 3 cut(s) 811, 1105, 1207
BsaWI WCCGGW 1 cut(s) 668
Bsc4I CCNNNNNNNGG 1 cut(s) 812
Bse118I RCCGGY 2 cut(s) 6, 668
Bse1I ACTGG 8 cut(s) 236, 704, 785, 906, 1028, 1151, 1225, 1353
Bse3DI GCAATG 2 cut(s) 971, 1044
BseBI CCWGG 1 cut(s) 121
BseDI CCNNGG 3 cut(s) 811, 1105, 1207
BseLI CCNNNNNNNGG 1 cut(s) 812
BseMI GCAATG 2 cut(s) 971, 1044
BseMII CTCAG 3 cut(s) 876, 1268, 1394
BseNI ACTGG 8 cut(s) 236, 704, 785, 906, 1028, 1151, 1225, 1353
BseXI GCAGC 1 cut(s) 1140
BshFI GGCC 7 cut(s) 6, 57, 72, 77, 87, 1110, 1378
BshTI ACCGGT 1 cut(s) 668
BsiHKAI GWGCWC 1 cut(s) 760
BsiSI CCGG 7 cut(s) 7, 18, 73, 78, 84, 669, 786
BslFI GGGAC 2 cut(s) 595, 1016
BslI CCNNNNNNNGG 1 cut(s) 812
BsmAI GTCTC 2 cut(s) 561, 929
BsmFI GGGAC 2 cut(s) 595, 1016
BsmI GAATGC 2 cut(s) 476, 1282
BsnI GGCC 7 cut(s) 6, 57, 72, 77, 87, 1110, 1378
Bsp1286I GDGCHC 2 cut(s) 18, 760
Bsp143I GATC 4 cut(s) 300, 392, 522, 1363
Bsp19I CCATGG 1 cut(s) 1207
BspACI CCGC 2 cut(s) 59, 248
BspANI GGCC 7 cut(s) 6, 57, 72, 77, 87, 1110, 1378
BspCNI CTCAG 3 cut(s) 877, 1267, 1393
BspLI GGNNCC 1 cut(s) 82
BspPI GGATC 3 cut(s) 308, 400, 530
BsrDI GCAATG 2 cut(s) 971, 1044
BsrFI RCCGGY 2 cut(s) 6, 668
BsrI ACTGG 8 cut(s) 236, 704, 785, 906, 1028, 1151, 1225, 1353
BssAI RCCGGY 2 cut(s) 6, 668
BssECI CCNNGG 3 cut(s) 811, 1105, 1207
BssMI GATC 4 cut(s) 300, 392, 522, 1363
BssSI CACGAG 2 cut(s) 11, 526
BssT1I CCWWGG 2 cut(s) 811, 1207
Bst2BI CACGAG 2 cut(s) 11, 526
Bst2UI CCWGG 1 cut(s) 121
Bst4CI ACNGT 1 cut(s) 773
BstC8I GCNNGC 2 cut(s) 8, 59
BstDEI CTNAG 6 cut(s) 680, 840, 885, 1065, 1254, 1380
BstDSI CCRYGG 2 cut(s) 1105, 1207
BstEII GGTNACC 1 cut(s) 1189
BstH2I RGCGCY 1 cut(s) 220
BstHHI GCGC 1 cut(s) 219
BstKTI GATC 4 cut(s) 303, 395, 525, 1366
BstMAI GTCTC 2 cut(s) 561, 929
BstMBI GATC 4 cut(s) 300, 392, 522, 1363
BstNI CCWGG 1 cut(s) 121
BstNSI RCATGY 2 cut(s) 569, 1253
BstPI GGTNACC 1 cut(s) 1189
BstSCI CCNGG 5 cut(s) 16, 72, 77, 119, 785
BstV1I GCAGC 1 cut(s) 1140
BstV2I GAAGAC 1 cut(s) 842
BstX2I RGATCY 3 cut(s) 300, 392, 522
BstYI RGATCY 3 cut(s) 300, 392, 522
BsuI GTATCC 1 cut(s) 1136
BsuRI GGCC 7 cut(s) 6, 57, 72, 77, 87, 1110, 1378
BtgI CCRYGG 2 cut(s) 1105, 1207
BtsI GCAGTG 2 cut(s) 359, 1161
BtsIMutI CAGTG 5 cut(s) 359, 913, 923, 1161, 1346
Cac8I GCNNGC 2 cut(s) 8, 59
CaiI CAGNNNCTG 1 cut(s) 1034
CfoI GCGC 1 cut(s) 219
Cfr10I RCCGGY 2 cut(s) 6, 668
Cfr13I GGNCC 9 cut(s) 4, 56, 70, 75, 81, 86, 250, 783, 1376
CseI GACGC 1 cut(s) 367
Csp6I GTAC 2 cut(s) 184, 1074
CspAI ACCGGT 1 cut(s) 668
CviAII CATG 6 cut(s) 95, 534, 566, 967, 1208, 1250
CviQI GTAC 2 cut(s) 184, 1074
DdeI CTNAG 6 cut(s) 680, 840, 885, 1065, 1254, 1380
DpnI GATC 4 cut(s) 302, 394, 524, 1365
DpnII GATC 4 cut(s) 300, 392, 522, 1363
DraI TTTAAA 2 cut(s) 436, 777
Eco130I CCWWGG 2 cut(s) 811, 1207
Eco24I GRGCYC 1 cut(s) 18
Eco47I GGWCC 3 cut(s) 81, 250, 783
Eco47III AGCGCT 1 cut(s) 218
Eco91I GGTNACC 1 cut(s) 1189
EcoO109I RGGNCCY 1 cut(s) 1376
EcoO65I GGTNACC 1 cut(s) 1189
EcoRI GAATTC 1 cut(s) 326
EcoRII CCWGG 1 cut(s) 119
EcoT14I CCWWGG 2 cut(s) 811, 1207
EcoT22I ATGCAT 1 cut(s) 545
EcoT38I GRGCYC 1 cut(s) 18
ErhI CCWWGG 2 cut(s) 811, 1207
FaeI CATG 6 cut(s) 98, 537, 569, 970, 1211, 1253
FalI AAGNNNNNCTT 4 cut(s) 594, 626, 1002, 1034
FaqI GGGAC 2 cut(s) 595, 1016
FatI CATG 6 cut(s) 94, 533, 565, 966, 1207, 1249
FauI CCCGC 1 cut(s) 66
FauNDI CATATG 1 cut(s) 417
Fnu4HI GCNGC 1 cut(s) 1154
FriOI GRGCYC 1 cut(s) 18
Fsp4HI GCNGC 1 cut(s) 1154
FspBI CTAG 4 cut(s) 53, 497, 645, 858
GlaI GCGC 1 cut(s) 218
GluI GCNGC 1 cut(s) 1154
GsuI CTGGAG 1 cut(s) 721
HaeII RGCGCY 1 cut(s) 220
HaeIII GGCC 7 cut(s) 6, 57, 72, 77, 87, 1110, 1378
HapII CCGG 7 cut(s) 7, 18, 73, 78, 84, 669, 786
HgaI GACGC 1 cut(s) 367
HhaI GCGC 1 cut(s) 219
Hin1II CATG 6 cut(s) 98, 537, 569, 970, 1211, 1253
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 262
HinfI GANTC 5 cut(s) 616, 763, 799, 1094, 1221
HpaII CCGG 7 cut(s) 7, 18, 73, 78, 84, 669, 786
HphI GGTGA 2 cut(s) 683, 1278
Hpy188I TCNGA 6 cut(s) 762, 886, 1093, 1257, 1383, 1412
Hpy188III TCNNGA 4 cut(s) 467, 1019, 1358, 1367
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 5 cut(s) 118, 571, 1004, 1121, 1395
HpyCH4III ACNGT 1 cut(s) 773
HpyCH4V TGCA 9 cut(s) 415, 484, 537, 543, 630, 1037, 1156, 1232, 1282
HpyF3I CTNAG 6 cut(s) 680, 840, 885, 1065, 1254, 1380
Hsp92II CATG 6 cut(s) 98, 537, 569, 970, 1211, 1253
HspAI GCGC 1 cut(s) 217
KroI GCCGGC 1 cut(s) 6
KroNI GCCGGC 1 cut(s) 8
Kzo9I GATC 4 cut(s) 300, 392, 522, 1363
LmnI GCTCC 1 cut(s) 763
Lsp1109I GCAGC 1 cut(s) 1140
MaeI CTAG 4 cut(s) 53, 497, 645, 858
MaeIII GTNAC 2 cut(s) 592, 1189
MalI GATC 4 cut(s) 302, 394, 524, 1365
MboI GATC 4 cut(s) 300, 392, 522, 1363
MflI RGATCY 3 cut(s) 300, 392, 522
MhlI GDGCHC 2 cut(s) 18, 760
MluCI AATT 4 cut(s) 103, 326, 551, 1258
MlyI GAGTC 1 cut(s) 1088
MmeI TCCRAC 1 cut(s) 1362
Mph1103I ATGCAT 1 cut(s) 545
MroNI GCCGGC 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 1014
MslI CAYNNNNRTG 3 cut(s) 420, 538, 570
MspI CCGG 7 cut(s) 7, 18, 73, 78, 84, 669, 786
MspR9I CCNGG 5 cut(s) 18, 74, 79, 121, 787
MssI GTTTAAAC 1 cut(s) 777
Mva1269I GAATGC 2 cut(s) 476, 1282
MvaI CCWGG 1 cut(s) 121
NaeI GCCGGC 1 cut(s) 8
NciI CCSGG 4 cut(s) 18, 74, 79, 787
NcoI CCATGG 1 cut(s) 1207
NdeI CATATG 1 cut(s) 417
NdeII GATC 4 cut(s) 300, 392, 522, 1363
NgoMIV GCCGGC 1 cut(s) 6
NlaIII CATG 6 cut(s) 98, 537, 569, 970, 1211, 1253
NlaIV GGNNCC 1 cut(s) 82
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 1 cut(s) 592
NsiI ATGCAT 1 cut(s) 545
NspI RCATGY 2 cut(s) 569, 1253
PciI ACATGT 1 cut(s) 565
PctI GAATGC 2 cut(s) 476, 1282
PdiI GCCGGC 1 cut(s) 8
PdmI GAANNNNTTC 1 cut(s) 1014
PfeI GAWTC 4 cut(s) 616, 763, 799, 1221
PfoI TCCNGGA 1 cut(s) 119
PinAI ACCGGT 1 cut(s) 668
PkrI GCNGC 1 cut(s) 1155
PleI GAGTC 1 cut(s) 1088
PmeI GTTTAAAC 1 cut(s) 777
PpsI GAGTC 1 cut(s) 1088
PscI ACATGT 1 cut(s) 565
PshBI ATTAAT 1 cut(s) 1079
Psp6I CCWGG 1 cut(s) 119
PspEI GGTNACC 1 cut(s) 1189
PspGI CCWGG 1 cut(s) 119
PspN4I GGNNCC 1 cut(s) 82
PspPI GGNCC 9 cut(s) 4, 56, 70, 75, 81, 86, 250, 783, 1376
PsrI GAACNNNNNNTAC 2 cut(s) 873, 905
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 3 cut(s) 300, 392, 522
RsaI GTAC 2 cut(s) 185, 1075
RsaNI GTAC 2 cut(s) 184, 1074
RseI CAYNNNNRTG 3 cut(s) 420, 538, 570
SatI GCNGC 1 cut(s) 1154
Sau3AI GATC 4 cut(s) 300, 392, 522, 1363
Sau96I GGNCC 9 cut(s) 4, 56, 70, 75, 81, 86, 250, 783, 1376
SchI GAGTC 1 cut(s) 1088
ScrFI CCNGG 5 cut(s) 18, 74, 79, 121, 787
SduI GDGCHC 2 cut(s) 18, 760
SinI GGWCC 3 cut(s) 81, 250, 783
SmiMI CAYNNNNRTG 3 cut(s) 420, 538, 570
SmlI CTYRAG 1 cut(s) 1181
SmoI CTYRAG 1 cut(s) 1181
Sse9I AATT 4 cut(s) 103, 326, 551, 1258
SsiI CCGC 2 cut(s) 59, 248
SspMI CTAG 4 cut(s) 53, 497, 645, 858
StyD4I CCNGG 5 cut(s) 16, 72, 77, 119, 785
StyI CCWWGG 2 cut(s) 811, 1207
TaaI ACNGT 1 cut(s) 773
TaqI TCGA 1 cut(s) 696
TasI AATT 4 cut(s) 103, 326, 551, 1258
TatI WGTACW 1 cut(s) 1073
TfiI GAWTC 4 cut(s) 616, 763, 799, 1221
TscAI CASTG 5 cut(s) 366, 913, 930, 1168, 1353
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 1 cut(s) 1153
Tsp45I GTSAC 1 cut(s) 592
TspDTI ATGAA 5 cut(s) 182, 434, 522, 812, 992
TspGWI ACGGA 3 cut(s) 148, 1094, 1233
TspRI CASTG 5 cut(s) 366, 913, 930, 1168, 1353
VpaK11BI GGWCC 3 cut(s) 81, 250, 783
VspI ATTAAT 1 cut(s) 1079
XapI RAATTY 3 cut(s) 103, 326, 1258
XceI RCATGY 2 cut(s) 569, 1253
XcmI CCANNNNNNNNNTGG 1 cut(s) 1345
XmnI GAANNNNTTC 1 cut(s) 1014
XspI CTAG 4 cut(s) 53, 497, 645, 858
Zsp2I ATGCAT 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.