pycom16g24710

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
26285341 .. 26286171
831 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g24710.1

Sequence Viewer

Length: 831 bp
ATGGAAAATATTCGAGCTGGGCTACGAGGAGAAGTCATTGGCCAAGCAGTTGACAGTGATGATGATGACGATGAGGGCGAATGTGATGATGACATGGGACTTGAAGAACGACGCAATTTCAAACAAGCATTACGTGTCTCCAAACAGTCAGCATGGGAAAGAGAACACCTTCATAAAATTTCTAATAGAGCACAAGGTTTCGGGACAAGTGGTGGTGCACAAATGAGACGGGGAGCAAGTGTTAGAGAATCACAACCAACACCACCAATAGCCGCAAGTTTATATAAGTCATCCAAAGCACGTCAAAATAGTGTTTGGAGTTATTTCACAGGAGGTAATGTGAAGGAGGGAATGGGGCGTCTAATTAGCAAGTTCTTTATCTATGAAAATGTCCCTGCTGAGAAGGCATCAACACATTATTTCAAAAATATGGTATTGGGATGTCAACAGGCCGATGTTGGAGTACAACCTCCCACTCCCTATGAGGTAAAAAACAAATATTTGGAAATGAAGTATAAAGACATTGGCAAGTATGTTAACAAGTTGAGGTCAAAGTGGGAAACTAATGGTTGCACAATCATGTGTGACGGATGGATTGGCCTGACCAGATTGTCTATCATAAACTTCATGGTATACTCTAAGGGAAAGACAATTTTTTTGAAGTCCGTTGATACTTCAGACCATATAAAGAACTACAAGTATATTTACAAATTATTAAGGGATGTAATCATGGAGGTGGGAGAGCATAATGTTGTCCAAGTCATGACCGACAACGATTCTGCATTTGTCAAAGCTAGAAAAAAGTTAATGAAGCATCATAATGTGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

277

Amino Acids

31.44

Weight (kDa)

9.15

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 158 - 274 1.1e-37 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 610
AccI GTMKAC 1 cut(s) 633
AciI CCGC 1 cut(s) 273
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 177
AcuI CTGAAG 1 cut(s) 660
AcyI GRCGYC 1 cut(s) 358
AfaI GTAC 1 cut(s) 465
AflIII ACRYGT 1 cut(s) 133
AgsI TTSAA 4 cut(s) 104, 121, 424, 661
AjiI CACGTC 1 cut(s) 302
AluBI AGCT 2 cut(s) 17, 794
AluI AGCT 2 cut(s) 17, 794
Alw21I GWGCWC 2 cut(s) 193, 220
Alw26I GTCTC 2 cut(s) 142, 220
Alw44I GTGCAC 1 cut(s) 216
AoxI GGCC 3 cut(s) 40, 450, 598
ApaLI GTGCAC 1 cut(s) 216
ApoI RAATTY 1 cut(s) 177
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
Asp700I GAANNNNTTC 2 cut(s) 9, 168
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 42
Bbv12I GWGCWC 2 cut(s) 193, 220
BccI CCATC 1 cut(s) 585
BcoDI GTCTC 2 cut(s) 142, 220
BfaI CTAG 1 cut(s) 795
BisI GCNGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 274
BmgBI CACGTC 1 cut(s) 302
BmsI GCATC 2 cut(s) 416, 823
BsaAI YACGTR 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 358
BsaXI ACNNNNNCTCC 4 cut(s) 225, 255, 324, 354
BseGI GGATG 4 cut(s) 290, 446, 596, 727
BseMII CTCAG 1 cut(s) 390
BseRI GAGGAG 1 cut(s) 42
BseSI GKGCMC 1 cut(s) 220
BseYI CCCAGC 1 cut(s) 17
BshFI GGCC 3 cut(s) 42, 452, 600
BsiHKAI GWGCWC 2 cut(s) 193, 220
BslFI GGGAC 3 cut(s) 111, 217, 377
BsmAI GTCTC 2 cut(s) 142, 220
BsmBI CGTCTC 1 cut(s) 220
BsmFI GGGAC 3 cut(s) 111, 217, 377
BsnI GGCC 3 cut(s) 42, 452, 600
Bsp1286I GDGCHC 2 cut(s) 193, 220
BspACI CCGC 1 cut(s) 273
BspANI GGCC 3 cut(s) 42, 452, 600
BspCNI CTCAG 1 cut(s) 391
BspHI TCATGA 1 cut(s) 762
BssNAI GTATAC 1 cut(s) 634
BssNI GRCGYC 1 cut(s) 358
Bst1107I GTATAC 1 cut(s) 634
Bst4CI ACNGT 2 cut(s) 56, 147
BstACI GRCGYC 1 cut(s) 358
BstBAI YACGTR 1 cut(s) 134
BstDEI CTNAG 2 cut(s) 399, 639
BstF5I GGATG 4 cut(s) 290, 446, 596, 727
BstMAI GTCTC 2 cut(s) 142, 220
BstMWI GCNNNNNNNGC 1 cut(s) 404
BstSLI GKGCMC 1 cut(s) 220
BstZ17I GTATAC 1 cut(s) 634
BsuRI GGCC 3 cut(s) 42, 452, 600
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 4 cut(s) 290, 446, 596, 727
BtsIMutI CAGTG 1 cut(s) 61
CciI TCATGA 1 cut(s) 762
CseI GACGC 2 cut(s) 120, 347
Csp6I GTAC 1 cut(s) 464
CviAII CATG 6 cut(s) 94, 153, 580, 628, 730, 763
CviJI RGCY 7 cut(s) 17, 22, 42, 272, 452, 600, 794
CviKI_1 RGCY 7 cut(s) 17, 22, 42, 272, 452, 600, 794
CviQI GTAC 1 cut(s) 464
DdeI CTNAG 2 cut(s) 399, 639
DrdI GACNNNNNNGTC 1 cut(s) 610
DseDI GACNNNNNNGTC 1 cut(s) 610
EaeI YGGCCR 1 cut(s) 40
Eco57I CTGAAG 1 cut(s) 660
Esp3I CGTCTC 1 cut(s) 220
FaeI CATG 6 cut(s) 97, 156, 583, 631, 733, 766
FaqI GGGAC 3 cut(s) 111, 217, 377
FatI CATG 6 cut(s) 93, 152, 579, 627, 729, 762
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 1 cut(s) 273
FokI GGATG 4 cut(s) 277, 453, 603, 734
Fsp4HI GCNGC 1 cut(s) 273
FspBI CTAG 1 cut(s) 795
GluI GCNGC 1 cut(s) 273
GsaI CCCAGC 1 cut(s) 21
HaeIII GGCC 3 cut(s) 42, 452, 600
HgaI GACGC 2 cut(s) 120, 347
Hin1I GRCGYC 1 cut(s) 358
Hin1II CATG 6 cut(s) 97, 156, 583, 631, 733, 766
HincII GTYRAC 3 cut(s) 52, 446, 538
HindII GTYRAC 3 cut(s) 52, 446, 538
HinfI GANTC 2 cut(s) 248, 776
HpaI GTTAAC 1 cut(s) 538
Hpy166II GTNNAC 5 cut(s) 52, 218, 446, 538, 634
Hpy188I TCNGA 1 cut(s) 679
Hpy188III TCNNGA 2 cut(s) 202, 763
Hpy8I GTNNAC 5 cut(s) 52, 218, 446, 538, 634
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 3 cut(s) 179, 337, 397
HpyCH4III ACNGT 2 cut(s) 56, 147
HpyCH4IV ACGT 2 cut(s) 133, 301
HpyCH4V TGCA 3 cut(s) 218, 573, 782
HpyF10VI GCNNNNNNNGC 1 cut(s) 404
HpyF3I CTNAG 2 cut(s) 399, 639
HpySE526I ACGT 2 cut(s) 133, 301
Hsp92I GRCGYC 1 cut(s) 358
Hsp92II CATG 6 cut(s) 97, 156, 583, 631, 733, 766
KspAI GTTAAC 1 cut(s) 538
LmnI GCTCC 1 cut(s) 233
LpnPI CCDG 6 cut(s) 3, 315, 408, 434, 614, 619
LweI GCATC 2 cut(s) 416, 823
MaeI CTAG 1 cut(s) 795
MaeII ACGT 2 cut(s) 133, 301
MaeIII GTNAC 1 cut(s) 584
MboII GAAGA 1 cut(s) 116
MhlI GDGCHC 2 cut(s) 193, 220
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 5 cut(s) 115, 177, 363, 651, 710
MluNI TGGCCA 1 cut(s) 42
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 8 cut(s) 20, 67, 326, 340, 478, 480, 540, 727
Mox20I TGGCCA 1 cut(s) 42
MroXI GAANNNNTTC 2 cut(s) 9, 168
MscI TGGCCA 1 cut(s) 42
MseI TTAA 3 cut(s) 537, 716, 806
MslI CAYNNNNRTG 3 cut(s) 578, 734, 819
Msp20I TGGCCA 1 cut(s) 42
MwoI GCNNNNNNNGC 1 cut(s) 404
NlaIII CATG 6 cut(s) 97, 156, 583, 631, 733, 766
NmuCI GTSAC 1 cut(s) 584
PagI TCATGA 1 cut(s) 762
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdmI GAANNNNTTC 2 cut(s) 9, 168
PfeI GAWTC 2 cut(s) 248, 776
PkrI GCNGC 1 cut(s) 274
Ppu21I YACGTR 1 cut(s) 134
PspFI CCCAGC 1 cut(s) 17
RsaI GTAC 1 cut(s) 465
RsaNI GTAC 1 cut(s) 464
RseI CAYNNNNRTG 3 cut(s) 578, 734, 819
SaqAI TTAA 3 cut(s) 537, 716, 806
SatI GCNGC 1 cut(s) 273
SduI GDGCHC 2 cut(s) 193, 220
SfaNI GCATC 2 cut(s) 416, 823
SmiMI CAYNNNNRTG 3 cut(s) 578, 734, 819
Sse9I AATT 5 cut(s) 115, 177, 363, 651, 710
SsiI CCGC 1 cut(s) 273
SspI AATATT 2 cut(s) 10, 500
SspMI CTAG 1 cut(s) 795
TaaI ACNGT 2 cut(s) 56, 147
TaiI ACGT 2 cut(s) 136, 304
TaqI TCGA 1 cut(s) 13
TaqII GACCGA 1 cut(s) 782
TasI AATT 5 cut(s) 115, 177, 363, 651, 710
TatI WGTACW 1 cut(s) 463
TauI GCSGC 1 cut(s) 275
TfiI GAWTC 2 cut(s) 248, 776
Tru1I TTAA 3 cut(s) 537, 716, 806
Tru9I TTAA 3 cut(s) 537, 716, 806
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 1 cut(s) 584
Tsp45I GTSAC 1 cut(s) 584
TspDTI ATGAA 5 cut(s) 161, 399, 524, 616, 824
TspGWI ACGGA 2 cut(s) 603, 655
TspRI CASTG 1 cut(s) 61
VneI GTGCAC 1 cut(s) 216
XapI RAATTY 1 cut(s) 177
XmiI GTMKAC 1 cut(s) 633
XmnI GAANNNNTTC 2 cut(s) 9, 168
XspI CTAG 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.