Rmu_sc0032114.1_g000001
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032114.1
Physical Location & Seq
Reverse (-)
557 .. 1288
732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032114.1_g000001.1.cds

Sequence Viewer

Length: 732 bp
atgcctgcacacctcgatgatgaagctggaagacctcttccacaagttgtagaaattgcaattaatgttggaatcaacgtagagagagtcttatctgaagaagttgttaaaaacacagaagataatttcgatagtgatgatgcgtggggtggtatagcaactccaaatagttctgatgatggtggagagggtggaagcggaacaggtggtggaggtgaaaaatatgaatatggacaatcttctgtggatggaggcttccaatttacctgtgaaggtaattttgatcatgtcacccaagatgaagaccacggagtgagaacagctggtcatggtgctcaagagaagacccgatatgggaggaggactagaggtgcaactgatgatcaaagtaccccatctgatgtttcttcaattgccttaagttctgactctatcagtttaggcacaaagctcagtgagatctcaaatgaatctcatgaaggcaacaatcaatttggttctgatgcttatggatataatcaatatggagaagtatatgatcagtcatccagtttggttcatccttattatccccttataggggaaacagtcggcagctctaaagagatctataactatcatgttcattactacatttcgcactatatgggtcatatctcgtggtctgattattgcattttcatataccagcgagcagcttttcaacctcctagagtctctttttggatgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

243

Amino Acids

26.61

Weight (kDa)

4.51

Isoelectric Point (pI)

42.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 198
AcuI CTGAAG 1 cut(s) 117
AdeI CACNNNGTG 1 cut(s) 313
AfaI GTAC 1 cut(s) 391
AfiI CCNNNNNNNGG 4 cut(s) 354, 578, 579, 580
AflII CTTAAG 1 cut(s) 418
AgsI TTSAA 2 cut(s) 411, 704
AluBI AGCT 5 cut(s) 26, 323, 451, 597, 698
AluI AGCT 5 cut(s) 26, 323, 451, 597, 698
Alw21I GWGCWC 1 cut(s) 337
Alw26I GTCTC 1 cut(s) 721
ApeKI GCWGC 2 cut(s) 594, 695
AseI ATTAAT 1 cut(s) 63
AsuHPI GGTGA 2 cut(s) 227, 283
BauI CACGAG 1 cut(s) 658
BbsI GAAGAC 3 cut(s) 37, 309, 350
Bbv12I GWGCWC 1 cut(s) 337
BbvI GCAGC 2 cut(s) 606, 707
BccI CCATC 3 cut(s) 173, 242, 403
BclI TGATCA 3 cut(s) 283, 382, 538
BcoDI GTCTC 1 cut(s) 721
BfaI CTAG 2 cut(s) 366, 711
BfrI CTTAAG 1 cut(s) 418
BglII AGATCT 2 cut(s) 459, 606
BisI GCNGC 2 cut(s) 595, 696
BlsI GCNGC 2 cut(s) 596, 697
BmsI GCATC 2 cut(s) 130, 493
BpiI GAAGAC 3 cut(s) 37, 309, 350
BpuEI CTTGAG 1 cut(s) 321
BsaJI CCNNGG 1 cut(s) 307
Bsc4I CCNNNNNNNGG 4 cut(s) 354, 578, 579, 580
Bse1I ACTGG 1 cut(s) 549
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 4 cut(s) 253, 545, 559, 732
BseLI CCNNNNNNNGG 4 cut(s) 354, 578, 579, 580
BseMII CTCAG 1 cut(s) 466
BseNI ACTGG 1 cut(s) 549
BseRI GAGGAG 1 cut(s) 373
BseXI GCAGC 2 cut(s) 606, 707
BsiHKAI GWGCWC 1 cut(s) 337
BslI CCNNNNNNNGG 4 cut(s) 354, 578, 579, 580
BsmAI GTCTC 1 cut(s) 721
Bsp1286I GDGCHC 1 cut(s) 337
Bsp143I GATC 5 cut(s) 283, 382, 459, 538, 606
BspACI CCGC 1 cut(s) 198
BspCNI CTCAG 1 cut(s) 465
BspHI TCATGA 1 cut(s) 475
BspTI CTTAAG 1 cut(s) 418
BsrI ACTGG 1 cut(s) 549
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 5 cut(s) 283, 382, 459, 538, 606
BssSI CACGAG 1 cut(s) 658
Bst2BI CACGAG 1 cut(s) 658
Bst4CI ACNGT 1 cut(s) 589
Bst6I CTCTTC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 418
BstC8I GCNNGC 2 cut(s) 6, 693
BstDEI CTNAG 1 cut(s) 452
BstDSI CCRYGG 1 cut(s) 307
BstF5I GGATG 4 cut(s) 253, 545, 559, 732
BstKTI GATC 5 cut(s) 286, 385, 462, 541, 609
BstMAI GTCTC 1 cut(s) 721
BstMBI GATC 5 cut(s) 283, 382, 459, 538, 606
BstV1I GCAGC 2 cut(s) 606, 707
BstV2I GAAGAC 3 cut(s) 37, 309, 350
BstX2I RGATCY 2 cut(s) 459, 606
BstYI RGATCY 2 cut(s) 459, 606
BtgI CCRYGG 1 cut(s) 307
BtsCI GGATG 4 cut(s) 253, 545, 559, 732
BtsIMutI CAGTG 1 cut(s) 460
Cac8I GCNNGC 2 cut(s) 6, 693
CciI TCATGA 1 cut(s) 475
Csp6I GTAC 1 cut(s) 390
CviAII CATG 4 cut(s) 287, 329, 476, 620
CviJI RGCY 6 cut(s) 26, 255, 323, 451, 597, 698
CviKI_1 RGCY 6 cut(s) 26, 255, 323, 451, 597, 698
CviQI GTAC 1 cut(s) 390
DdeI CTNAG 1 cut(s) 452
DpnI GATC 5 cut(s) 285, 384, 461, 540, 608
DpnII GATC 5 cut(s) 283, 382, 459, 538, 606
DraIII CACNNNGTG 1 cut(s) 313
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 117
FaeI CATG 4 cut(s) 290, 332, 479, 623
FatI CATG 4 cut(s) 286, 328, 475, 619
FbaI TGATCA 3 cut(s) 283, 382, 538
Fnu4HI GCNGC 2 cut(s) 595, 696
FokI GGATG 3 cut(s) 260, 532, 546
Fsp4HI GCNGC 2 cut(s) 595, 696
FspBI CTAG 2 cut(s) 366, 711
GluI GCNGC 2 cut(s) 595, 696
Hin1II CATG 4 cut(s) 290, 332, 479, 623
HinfI GANTC 5 cut(s) 72, 87, 428, 470, 714
HphI GGTGA 2 cut(s) 227, 283
Hpy188I TCNGA 6 cut(s) 97, 175, 400, 427, 502, 667
Hpy188III TCNNGA 2 cut(s) 338, 476
HpyAV CCTTC 2 cut(s) 266, 473
HpyCH4III ACNGT 1 cut(s) 589
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 4 cut(s) 8, 59, 374, 675
HpyF3I CTNAG 1 cut(s) 452
HpySE526I ACGT 1 cut(s) 78
Hsp92II CATG 4 cut(s) 290, 332, 479, 623
Ksp22I TGATCA 3 cut(s) 283, 382, 538
Kzo9I GATC 5 cut(s) 283, 382, 459, 538, 606
LpnPI CCDG 7 cut(s) 12, 18, 189, 280, 309, 562, 701
Lsp1109I GCAGC 2 cut(s) 606, 707
LweI GCATC 2 cut(s) 130, 493
MaeI CTAG 2 cut(s) 366, 711
MaeII ACGT 1 cut(s) 78
MaeIII GTNAC 1 cut(s) 289
MalI GATC 5 cut(s) 285, 384, 461, 540, 608
MboI GATC 5 cut(s) 283, 382, 459, 538, 606
MboII GAAGA 8 cut(s) 29, 42, 110, 131, 231, 314, 355, 399
MfeI CAATTG 1 cut(s) 411
MflI RGATCY 2 cut(s) 459, 606
MhlI GDGCHC 1 cut(s) 337
MluCI AATT 7 cut(s) 54, 60, 124, 260, 277, 411, 491
MlyI GAGTC 3 cut(s) 96, 422, 723
MmeI TCCRAC 1 cut(s) 49
MnlI CCTC 9 cut(s) 23, 45, 181, 206, 245, 351, 354, 362, 717
MseI TTAA 3 cut(s) 63, 108, 419
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 1 cut(s) 323
MspCI CTTAAG 1 cut(s) 418
MunI CAATTG 1 cut(s) 411
NdeII GATC 5 cut(s) 283, 382, 459, 538, 606
NlaIII CATG 4 cut(s) 290, 332, 479, 623
NmuCI GTSAC 1 cut(s) 289
PagI TCATGA 1 cut(s) 475
PfeI GAWTC 2 cut(s) 72, 470
PkrI GCNGC 2 cut(s) 596, 697
PleI GAGTC 3 cut(s) 95, 422, 722
PpsI GAGTC 3 cut(s) 95, 422, 722
PshBI ATTAAT 1 cut(s) 63
PsuI RGATCY 2 cut(s) 459, 606
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 1 cut(s) 391
RsaNI GTAC 1 cut(s) 390
RseI CAYNNNNRTG 1 cut(s) 15
SaqAI TTAA 3 cut(s) 63, 108, 419
SatI GCNGC 2 cut(s) 595, 696
Sau3AI GATC 5 cut(s) 283, 382, 459, 538, 606
SchI GAGTC 3 cut(s) 96, 422, 723
SduI GDGCHC 1 cut(s) 337
SfaNI GCATC 2 cut(s) 130, 493
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 2 cut(s) 336, 418
SmoI CTYRAG 2 cut(s) 336, 418
Sse9I AATT 7 cut(s) 54, 60, 124, 260, 277, 411, 491
SsiI CCGC 1 cut(s) 198
SspMI CTAG 2 cut(s) 366, 711
TaaI ACNGT 1 cut(s) 589
TaiI ACGT 1 cut(s) 81
TaqI TCGA 2 cut(s) 15, 129
TasI AATT 7 cut(s) 54, 60, 124, 260, 277, 411, 491
TfiI GAWTC 2 cut(s) 72, 470
Tru1I TTAA 3 cut(s) 63, 108, 419
Tru9I TTAA 3 cut(s) 63, 108, 419
TscAI CASTG 1 cut(s) 460
TseFI GTSAC 1 cut(s) 289
TseI GCWGC 2 cut(s) 594, 695
Tsp45I GTSAC 1 cut(s) 289
TspDTI ATGAA 8 cut(s) 36, 240, 315, 483, 492, 548, 614, 670
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 1 cut(s) 460
Vha464I CTTAAG 1 cut(s) 418
VspI ATTAAT 1 cut(s) 63
XspI CTAG 2 cut(s) 366, 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.