Rmu_sc0024470.1_g000005

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024470.1
Physical Location & Seq
Forward (+)
14399 .. 16098
1700 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024470.1_g000005.1.cds

Sequence Viewer

Length: 705 bp
atgtctgcatctcctcctgatgacaacggtcattggataggccaatctaatcttttacctcgatcctctcgcagggagtctcatggctcacatattccttcaaggacaaatgatagctctagcacaagatcaggaggctcatcaagcatcagaggtggagatagtggaagttacagcggaggtggaggtgatgatagagttggaggttataatggaagtcaaattggtcacatgagcccatttactggtgagccaaacttcacacatgcaacacaagatgaagatcatgggagtaggagagcaggatcgggtattggtgctataggaaaacactatacaccaagggaaagaggtcaaggaagcatgtcaaggcatgaagatgattctttatctcccacttttgactcatttggtgtgggaggaagcaattatggaccttactcttatgggcaaaacttggcaatgccttacccagcatacatgacgccttatgggatgcaatcaagtgacaactcatggacacaatctgaaggacaatcttcaaatgattatggttatggccaaagtcaagcaatgcatgatccctactataactaccagcaccaaaacccacagccaatccccccggacccatatggttggcatgtaagtcaatacatgcaaaactacagaggggaggtatcatttaatgactattcttcataa
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

234

Amino Acids

25.39

Weight (kDa)

5.55

Isoelectric Point (pI)

70.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 210
AccB7I CCANNNNNTGG 1 cut(s) 245
AciI CCGC 1 cut(s) 177
AclWI GGATC 3 cut(s) 57, 313, 575
AcoI YGGCCR 1 cut(s) 559
AcuI CTGAAG 1 cut(s) 549
AcyI GRCGYC 1 cut(s) 485
AfiI CCNNNNNNNGG 2 cut(s) 72, 245
AgsI TTSAA 2 cut(s) 102, 543
AluBI AGCT 1 cut(s) 117
AluI AGCT 1 cut(s) 117
Alw26I GTCTC 1 cut(s) 84
AlwI GGATC 3 cut(s) 57, 313, 575
AoxI GGCC 2 cut(s) 40, 559
AspS9I GGNCC 2 cut(s) 434, 628
AsuC2I CCSGG 1 cut(s) 626
AsuHPI GGTGA 2 cut(s) 200, 260
AvaII GGWCC 2 cut(s) 434, 628
BalI TGGCCA 1 cut(s) 561
BanII GRGCYC 1 cut(s) 239
BcnI CCSGG 1 cut(s) 626
BcoDI GTCTC 1 cut(s) 84
BfaI CTAG 1 cut(s) 120
BfmI CTRYAG 2 cut(s) 321, 667
Bme1390I CCNGG 1 cut(s) 626
Bme18I GGWCC 2 cut(s) 434, 628
BmgT120I GGNCC 2 cut(s) 434, 628
BmiI GGNNCC 1 cut(s) 630
BmrFI CCNGG 1 cut(s) 626
BmsI GCATC 3 cut(s) 17, 156, 486
BoxI GACNNNNGTC 1 cut(s) 27
BpuMI CCSGG 1 cut(s) 626
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 485
BsaJI CCNNGG 2 cut(s) 341, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 72, 245
Bse1I ACTGG 1 cut(s) 250
Bse3DI GCAATG 2 cut(s) 468, 579
Bse8I GATNNNNATC 1 cut(s) 282
BseDI CCNNGG 2 cut(s) 341, 624
BseGI GGATG 1 cut(s) 501
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 2 cut(s) 72, 245
BseMI GCAATG 2 cut(s) 468, 579
BseNI ACTGG 1 cut(s) 250
BseYI CCCAGC 1 cut(s) 472
BshFI GGCC 2 cut(s) 42, 561
BsiSI CCGG 1 cut(s) 626
BslI CCNNNNNNNGG 2 cut(s) 72, 245
BsmAI GTCTC 1 cut(s) 84
BsnI GGCC 2 cut(s) 42, 561
Bsp1286I GDGCHC 1 cut(s) 239
Bsp143I GATC 5 cut(s) 62, 128, 283, 305, 580
BspACI CCGC 1 cut(s) 177
BspANI GGCC 2 cut(s) 42, 561
BspLI GGNNCC 1 cut(s) 630
BspPI GGATC 3 cut(s) 57, 313, 575
BsrDI GCAATG 2 cut(s) 468, 579
BsrI ACTGG 1 cut(s) 250
BssECI CCNNGG 2 cut(s) 341, 624
BssMI GATC 5 cut(s) 62, 128, 283, 305, 580
BssNI GRCGYC 1 cut(s) 485
BssT1I CCWWGG 1 cut(s) 341
Bst4CI ACNGT 1 cut(s) 29
BstACI GRCGYC 1 cut(s) 485
BstENI CCTNNNNNAGG 1 cut(s) 70
BstF5I GGATG 1 cut(s) 501
BstKTI GATC 5 cut(s) 65, 131, 286, 308, 583
BstMAI GTCTC 1 cut(s) 84
BstMBI GATC 5 cut(s) 62, 128, 283, 305, 580
BstMWI GCNNNNNNNGC 1 cut(s) 144
BstNSI RCATGY 4 cut(s) 269, 367, 647, 661
BstPAI GACNNNNGTC 1 cut(s) 27
BstSCI CCNGG 1 cut(s) 624
BstSFI CTRYAG 2 cut(s) 321, 667
BstXI CCANNNNNNTGG 1 cut(s) 639
BsuRI GGCC 2 cut(s) 42, 561
BtsCI GGATG 1 cut(s) 501
Cfr13I GGNCC 2 cut(s) 434, 628
CseI GACGC 1 cut(s) 493
CviJI RGCY 8 cut(s) 42, 87, 117, 138, 237, 253, 561, 616
CviKI_1 RGCY 8 cut(s) 42, 87, 117, 138, 237, 253, 561, 616
DpnI GATC 5 cut(s) 64, 130, 285, 307, 582
DpnII GATC 5 cut(s) 62, 128, 283, 305, 580
EaeI YGGCCR 1 cut(s) 559
Eco130I CCWWGG 1 cut(s) 341
Eco24I GRGCYC 1 cut(s) 239
Eco47I GGWCC 2 cut(s) 434, 628
Eco57I CTGAAG 1 cut(s) 549
EcoNI CCTNNNNNAGG 1 cut(s) 70
EcoT14I CCWWGG 1 cut(s) 341
EcoT22I ATGCAT 1 cut(s) 579
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 1 cut(s) 341
FauNDI CATATG 1 cut(s) 634
FokI GGATG 1 cut(s) 508
FriOI GRGCYC 1 cut(s) 239
FspBI CTAG 1 cut(s) 120
GsaI CCCAGC 1 cut(s) 476
HaeIII GGCC 2 cut(s) 42, 561
HapII CCGG 1 cut(s) 626
HgaI GACGC 1 cut(s) 493
Hin1I GRCGYC 1 cut(s) 485
HinfI GANTC 3 cut(s) 77, 383, 404
HpaII CCGG 1 cut(s) 626
HphI GGTGA 2 cut(s) 200, 260
Hpy188I TCNGA 2 cut(s) 152, 529
Hpy188III TCNNGA 2 cut(s) 17, 132
HpyAV CCTTC 2 cut(s) 108, 524
HpyCH4III ACNGT 1 cut(s) 29
HpyCH4V TGCA 5 cut(s) 8, 269, 499, 577, 661
HpyF10VI GCNNNNNNNGC 1 cut(s) 144
Hsp92I GRCGYC 1 cut(s) 485
Kzo9I GATC 5 cut(s) 62, 128, 283, 305, 580
LpnPI CCDG 8 cut(s) 30, 58, 117, 231, 288, 486, 611, 639
LweI GCATC 3 cut(s) 17, 156, 486
MaeI CTAG 1 cut(s) 120
MaeIII GTNAC 3 cut(s) 170, 227, 506
MalI GATC 5 cut(s) 64, 130, 285, 307, 582
MboI GATC 5 cut(s) 62, 128, 283, 305, 580
MboII GAAGA 4 cut(s) 293, 389, 531, 690
MhlI GDGCHC 1 cut(s) 239
MlsI TGGCCA 1 cut(s) 561
MluCI AATT 2 cut(s) 222, 427
MluNI TGGCCA 1 cut(s) 561
MlyI GAGTC 2 cut(s) 86, 398
MmeI TCCRAC 1 cut(s) 181
Mox20I TGGCCA 1 cut(s) 561
Mph1103I ATGCAT 1 cut(s) 579
MscI TGGCCA 1 cut(s) 561
MseI TTAA 1 cut(s) 687
MslI CAYNNNNRTG 1 cut(s) 378
Msp20I TGGCCA 1 cut(s) 561
MspA1I CMGCKG 1 cut(s) 177
MspI CCGG 1 cut(s) 626
MspR9I CCNGG 1 cut(s) 626
MwoI GCNNNNNNNGC 1 cut(s) 144
NciI CCSGG 1 cut(s) 626
NdeI CATATG 1 cut(s) 634
NdeII GATC 5 cut(s) 62, 128, 283, 305, 580
NlaIV GGNNCC 1 cut(s) 630
NmuCI GTSAC 2 cut(s) 227, 506
NsiI ATGCAT 1 cut(s) 579
NspI RCATGY 4 cut(s) 269, 367, 647, 661
PfeI GAWTC 1 cut(s) 383
PflMI CCANNNNNTGG 1 cut(s) 245
PleI GAGTC 2 cut(s) 85, 398
PpsI GAGTC 2 cut(s) 85, 398
PshAI GACNNNNGTC 1 cut(s) 27
PsiI TTATAA 1 cut(s) 210
PspFI CCCAGC 1 cut(s) 472
PspN4I GGNNCC 1 cut(s) 630
PspPI GGNCC 2 cut(s) 434, 628
RseI CAYNNNNRTG 1 cut(s) 378
SaqAI TTAA 1 cut(s) 687
Sau3AI GATC 5 cut(s) 62, 128, 283, 305, 580
Sau96I GGNCC 2 cut(s) 434, 628
SchI GAGTC 2 cut(s) 86, 398
ScrFI CCNGG 1 cut(s) 626
SduI GDGCHC 1 cut(s) 239
SetI ASST 9 cut(s) 61, 119, 157, 184, 190, 208, 355, 439, 681
SfaNI GCATC 3 cut(s) 17, 156, 486
SfcI CTRYAG 2 cut(s) 321, 667
SinI GGWCC 2 cut(s) 434, 628
SmiMI CAYNNNNRTG 1 cut(s) 378
Sse9I AATT 2 cut(s) 222, 427
SsiI CCGC 1 cut(s) 177
SspMI CTAG 1 cut(s) 120
StyD4I CCNGG 1 cut(s) 624
StyI CCWWGG 1 cut(s) 341
TaaI ACNGT 1 cut(s) 29
TaqI TCGA 1 cut(s) 61
TasI AATT 2 cut(s) 222, 427
TfiI GAWTC 1 cut(s) 383
Tru1I TTAA 1 cut(s) 687
Tru9I TTAA 1 cut(s) 687
TseFI GTSAC 2 cut(s) 227, 506
Tsp45I GTSAC 2 cut(s) 227, 506
TspDTI ATGAA 3 cut(s) 294, 390, 690
Van91I CCANNNNNTGG 1 cut(s) 245
VpaK11BI GGWCC 2 cut(s) 434, 628
XagI CCTNNNNNAGG 1 cut(s) 70
XceI RCATGY 4 cut(s) 269, 367, 647, 661
XspI CTAG 1 cut(s) 120
Zsp2I ATGCAT 1 cut(s) 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.