Rw0G008270

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00308
OG0000220
Physical Location & Seq
Reverse (-)
19014 .. 22296
3283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G008270.1

Sequence Viewer

Length: 1824 bp
ATGGCAAGCAGCGGTAGAGGTGGAAATGATCCAGCATGGAAGTACGCAACTCCCGTCGAAGGAAATCGAAATGGTACAACATGTATATTTTGTTTTGGCACTTTTAAAAATGGAGGAATTACAAGATTGAAGAGTCATTTAGCGGGTTATGATCCTCACAAGAGTGTAAAGAAATGTGATAAGGTGCCACCGGAGATCAAAACAGAGGTGATAACATGGATAAAGAGAAAAGATTCTATTAAGCAAGAAAAGGCAGCTGTTCAAGATGATATTAGAGAAGAACTCCGCAATGATTATCTTGGCAATCAAACAAGTCCTGGTGTAAAGCTTCCTACCTCCTATGAAATTCAGACTCGTTACTTAGAGAATGAGTACACAGAAATGAAAAGGTATGTGGATACTCACAGAGAAACCTGGAAAATATATGGATGCACTATCATGTGTGATGGATGGACTGGCCCAACCAAAATGTCAATTCTAAATTTCATGGTGTATTCAAAAGGTTCAACTGTGTTTTTGAAGTCTGTAGATGCTTCACATATGAAAAAAAATGCTCAGTACATCGAACTATTGTTAGATGAGATTATCCAAGATGTTGAACCAGGAAATGTTGTCCAGATTGTCACTGACAATGCATCAGCATTTAAAAAGGCTAGAAGGGAACTACAGAAAAAATATCCGCTATTCTGGACCCTGTGTGCTGCCCACTGCATCGATTTGATATTTGAAGATATCGGGAAGCAAGAGACTGTTTCCACTGTCGTCAAATGGGCTCAAAGTGTAACTAACTACATCTACAATCATGGTTGGGTACTGGCTGAAATGAGGAGCATTACAAAGGAAGATTTGATTCGACCGGGTAAAACTCGATTTGCGACAAATCACATTGCCATCGACAGCATTTTGAAGAAGAAATCAGATTTGAGAAAATTGTTTACAAGTAGCGCATGGAATGAAAATGCAGCGAGCAGGACCAGAGATGGCAAAAGGATAGAAAAAAGAGTCCTCGATGGGACATTTTGGGATGGCATGGAAGCAGTCCATAAAATTTATAAGCCATTGTATGAGATTCTTCGAATTGTTGACACAGAAATTCAGCCAACCATGCCCATATTAATATATATGAGAGGAAAGAAATGGGTGCTTAAAATCATCAATGATAGATGGGATAACACATTAAGTCAACCATTGCATGCAGCAGCACATTTCTTAAACCCAAATTTTCATTATCGACATGATGTTGGTTATAGCCCACGTTTCACAAACTCTCTGGCAACAATTGTCGAACAATTTAACATAAATGGAGAAATTGCAGATACATTTGTGGATGAGAGATGCAAAGGAATCATTTGGGTCAACCATAGCAAGAAAAACAAGAGAAACCAAAAATACAGAGTCTTATCTGAAGAAGTTGTTAAAAACCCAGAAGATAATTCAGATAGTGATGATGCGTGGGGTGGTACAGCAACTCCAGATAGTTCTGATGATGGTGGAGAGGGTGGAAGCGGAACAGGTGGTGGAGGTGAAAGATATGAATATGGGCAATCTTCTAGCGCAGTGGGATCTCAAATGAATCTCATGAAGGCAACAATCAATTTGGTTATGATGCCTATGGATATAATCAATATGGAGAAGTATATGTTCAGTCATCTAGTTGGGTTCATCCTTATAGGGGAAACAGTCGGCAGCTCTAAAGAGATCTATAACTATCATGTTCATCACTACAATTCGCACTATATGGGTCATATGTCTTGGTCTGATTATTGCATTTTTGTAGACCAGCGAGCGGCTTTTCAACCTCCTAGAGTCTCTTTTTGGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

607

Amino Acids

69.35

Weight (kDa)

8.46

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 111 - 261 9.4e-50 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000220)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14882 FvH4_1g25271 FvH4_2g02251 FvH4_2g02251 FvH4_2g12511 FvH4_3g12392 FvH4_4g13981 FvH4_5g27011 FvH4_5g27012 FvH4_6g04722 FvH4_6g19751 FvH4_6g31371 FvH4_6g35011 FvH4_7g02741 FvH4_7g02741 FvH4_7g11332
malus_domestica MD00G1003900.v1.1 MD00G1004000.v1.1 MD10G1094800.v1.1 MD13G1044700.v1.1 MD13G1176700.v1.1 MD15G1343300.v1.1 MD15G1444800.v1.1
prunus_persica Prupe.1G199600_v2.0.a1 Prupe.1G215800_v2.0.a1 Prupe.3G104200_v2.0.a1
pyrus_communis pycom06g06750 pycom08g00120 pycom08g00130 pycom10g02160 pycom11g16040 pycom11g16050 pycom11g17730 pycom15g19390 pycom15g25050 pycom15g25060 pycom16g24700 pycom16g24710 pycom5153684g00040
rosa_chinensis RchiOBHm_Chr1g0361971 RchiOBHm_Chr1g0383751 RchiOBHm_Chr2g0121831 RchiOBHm_Chr2g0121841 RchiOBHm_Chr2g0168971 RchiOBHm_Chr4g0384811 RchiOBHm_Chr4g0385621 RchiOBHm_Chr5g0012611 RchiOBHm_Chr6g0271241 RchiOBHm_Chr6g0289011 RchiOBHm_Chr7g0216171 RchiOBHm_Chr7g0216181 RchiOBHm_Chr7g0239421
rosa_laevigata RLG00000001765 RLG00000002860 RLG00000003609 RLG00000004743 RLG00000018385 RLG00000022782 RLG00000024093 RLG00000035412
rosa_multiflora Rmu_sc0000239.1_g000042 Rmu_sc0000292.1_g000005 Rmu_sc0000414.1_g000004 Rmu_sc0000441.1_g000099 Rmu_sc0000578.1_g000002 Rmu_sc0000666.1_g000019 Rmu_sc0000690.1_g000008 Rmu_sc0000821.1_g000011 Rmu_sc0001068.1_g000021 Rmu_sc0001696.1_g000017 Rmu_sc0001851.1_g000006 Rmu_sc0001940.1_g000018 Rmu_sc0002322.1_g000025 Rmu_sc0002343.1_g000030 Rmu_sc0002351.1_g000020 Rmu_sc0002371.1_g000025 Rmu_sc0002530.1_g000003 Rmu_sc0003206.1_g000001 Rmu_sc0003556.1_g000020 Rmu_sc0003906.1_g000002 Rmu_sc0004122.1_g000002 Rmu_sc0004283.1_g000013 Rmu_sc0004657.1_g000053 Rmu_sc0004657.1_g000054 Rmu_sc0004920.1_g000006 Rmu_sc0004990.1_g000001 Rmu_sc0005046.1_g000011 Rmu_sc0005134.1_g000006 Rmu_sc0005281.1_g000004 Rmu_sc0005704.1_g000010 Rmu_sc0005767.1_g000009 Rmu_sc0005789.1_g000031 Rmu_sc0005849.1_g000010 Rmu_sc0006736.1_g000020 Rmu_sc0006754.1_g000001 Rmu_sc0007663.1_g000010 Rmu_sc0007705.1_g000005 Rmu_sc0007883.1_g000003 Rmu_sc0007941.1_g000003 Rmu_sc0009618.1_g000009 Rmu_sc0009840.1_g000007 Rmu_sc0010800.1_g000007 Rmu_sc0011620.1_g000005 Rmu_sc0013423.1_g000002 Rmu_sc0014544.1_g000001 Rmu_sc0015323.1_g000004 Rmu_sc0023737.1_g000001 Rmu_sc0024470.1_g000005 Rmu_sc0032114.1_g000001 Rmu_ssc0000372.1_g000050 Rmu_ssc0000420.1_g000006
rosa_roxburghii Rroxscaffold_1G00014580 Rroxscaffold_1G00050290 Rroxscaffold_2G00093920 Rroxscaffold_2G00131720 Rroxscaffold_5G00351350 Rroxscaffold_5G00386210 Rroxscaffold_6G00392840 Rroxscaffold_6G00404480 Rroxscaffold_6G00405300
rosa_rugosa Rorug02G0533800 Rorug03G0200600 Rorug05G0329600 Rorug07G0139200 Rorug07G0341500 Rorug07G0341600 Rorug07G0341700 Rorug07G0341800
rosa_samantha Rh2BG114900 Rh2BG222900 Rh2DG253700 Rh3CG200000 Rh4BG186200 Rh4DG156200 Rh5AG145800 Rh5BG370600 Rh6AG123800 Rh6BG424900 Rh6DG105300 Rh7AG381900 Rh7CG288100 Rh7CG401400
rosa_wichuraiana Rw0G008270 Rw1G014540 Rw2G043790 Rw6G021690 Rw7G030100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1053
AccB1I GGYRCC 1 cut(s) 184
AccBSI CCGCTC 1 cut(s) 1787
AccI GTMKAC 1 cut(s) 1776
AciI CCGC 6 cut(s) 12, 143, 286, 680, 1506, 1787
AclWI GGATC 3 cut(s) 23, 146, 1570
AcsI RAATTY 5 cut(s) 345, 481, 1047, 1092, 1219
AcuI CTGAAG 1 cut(s) 1425
AfaI GTAC 6 cut(s) 44, 76, 374, 560, 813, 1462
AfiI CCNNNNNNNGG 3 cut(s) 59, 1672, 1786
AflIII ACRYGT 1 cut(s) 80
AgsI TTSAA 9 cut(s) 130, 263, 498, 507, 520, 599, 728, 907, 1796
AjnI CCWGG 3 cut(s) 316, 413, 601
AleI CACNNNNGTG 1 cut(s) 162
AluBI AGCT 3 cut(s) 257, 328, 1689
AluI AGCT 3 cut(s) 257, 328, 1689
Alw26I GTCTC 2 cut(s) 740, 1813
AlwI GGATC 3 cut(s) 23, 146, 1570
AoxI GGCC 1 cut(s) 457
ApeKI GCWGC 7 cut(s) 9, 254, 701, 962, 1196, 1199, 1686
ApoI RAATTY 5 cut(s) 345, 481, 1047, 1092, 1219
AseI ATTAAT 1 cut(s) 1115
Asp700I GAANNNNTTC 1 cut(s) 232
AspLEI GCGC 2 cut(s) 947, 1556
AspS9I GGNCC 3 cut(s) 458, 690, 972
AsuC2I CCSGG 1 cut(s) 858
AsuHPI GGTGA 2 cut(s) 220, 1535
AsuII TTCGAA 1 cut(s) 1075
AvaII GGWCC 2 cut(s) 690, 972
BaeI ACNNNNGTAYC 2 cut(s) 1308, 1341
BanI GGYRCC 1 cut(s) 184
BanII GRGCYC 1 cut(s) 775
BbvI GCAGC 7 cut(s) 21, 266, 688, 974, 1208, 1211, 1698
BccI CCATC 8 cut(s) 440, 444, 899, 974, 1004, 1019, 1158, 1481
BciT130I CCWGG 3 cut(s) 318, 415, 603
BciVI GTATCC 1 cut(s) 391
BcnI CCSGG 1 cut(s) 858
BcoDI GTCTC 2 cut(s) 740, 1813
BfaI CTAG 4 cut(s) 654, 1551, 1652, 1803
BfmI CTRYAG 2 cut(s) 525, 665
BfuI GTATCC 1 cut(s) 391
BglII AGATCT 1 cut(s) 1698
BisI GCNGC 8 cut(s) 10, 255, 702, 963, 1197, 1200, 1687, 1788
BlsI GCNGC 8 cut(s) 11, 256, 703, 964, 1198, 1201, 1688, 1789
Bme1390I CCNGG 4 cut(s) 318, 415, 603, 858
Bme18I GGWCC 2 cut(s) 690, 972
BmgT120I GGNCC 3 cut(s) 458, 690, 972
BmiI GGNNCC 2 cut(s) 186, 692
BmrFI CCNGG 4 cut(s) 318, 415, 603, 858
BmsI GCATC 7 cut(s) 419, 520, 644, 720, 1325, 1438, 1596
BplI GAGNNNNNCTC 2 cut(s) 267, 299
BpmI CTGGAG 1 cut(s) 1455
Bpu14I TTCGAA 1 cut(s) 1075
BpuMI CCSGG 1 cut(s) 858
Bsa29I ATCGAT 1 cut(s) 714
BsaWI WCCGGW 1 cut(s) 190
BsaXI ACNNNNNCTCC 2 cut(s) 1453, 1483
Bsc4I CCNNNNNNNGG 3 cut(s) 59, 1672, 1786
Bse1I ACTGG 2 cut(s) 460, 819
Bse3DI GCAATG 3 cut(s) 295, 885, 1187
BseBI CCWGG 3 cut(s) 318, 415, 603
BseCI ATCGAT 1 cut(s) 714
BseGI GGATG 6 cut(s) 434, 455, 1030, 1333, 1662, 1824
BseLI CCNNNNNNNGG 3 cut(s) 59, 1672, 1786
BseMI GCAATG 3 cut(s) 295, 885, 1187
BseMII CTCAG 1 cut(s) 569
BseNI ACTGG 2 cut(s) 460, 819
BseRI GAGGAG 1 cut(s) 841
BseXI GCAGC 7 cut(s) 21, 266, 688, 974, 1208, 1211, 1698
Bsh1285I CGRYCG 1 cut(s) 857
BshFI GGCC 1 cut(s) 459
BshNI GGYRCC 1 cut(s) 184
BshVI ATCGAT 1 cut(s) 714
BsiEI CGRYCG 1 cut(s) 857
BsiSI CCGG 2 cut(s) 191, 857
BslFI GGGAC 1 cut(s) 1027
BslI CCNNNNNNNGG 3 cut(s) 59, 1672, 1786
BsmAI GTCTC 2 cut(s) 740, 1813
BsmFI GGGAC 1 cut(s) 1027
BsnI GGCC 1 cut(s) 459
Bsp119I TTCGAA 1 cut(s) 1075
Bsp1286I GDGCHC 1 cut(s) 775
Bsp143I GATC 5 cut(s) 28, 151, 195, 1562, 1698
BspACI CCGC 6 cut(s) 12, 143, 286, 680, 1506, 1787
BspANI GGCC 1 cut(s) 459
BspCNI CTCAG 1 cut(s) 568
BspDI ATCGAT 1 cut(s) 714
BspHI TCATGA 1 cut(s) 1578
BspLI GGNNCC 2 cut(s) 186, 692
BspPI GGATC 3 cut(s) 23, 146, 1570
BspT104I TTCGAA 1 cut(s) 1075
BspT107I GGYRCC 1 cut(s) 184
BsrBI CCGCTC 1 cut(s) 1787
BsrDI GCAATG 3 cut(s) 295, 885, 1187
BsrI ACTGG 2 cut(s) 460, 819
BssMI GATC 5 cut(s) 28, 151, 195, 1562, 1698
Bst2UI CCWGG 3 cut(s) 318, 415, 603
Bst4CI ACNGT 4 cut(s) 511, 751, 760, 1681
Bst6I CTCTTC 1 cut(s) 125
BstBI TTCGAA 1 cut(s) 1075
BstC8I GCNNGC 4 cut(s) 7, 967, 1194, 1785
BstDEI CTNAG 2 cut(s) 361, 555
BstF5I GGATG 6 cut(s) 434, 455, 1030, 1333, 1662, 1824
BstHHI GCGC 2 cut(s) 947, 1556
BstKTI GATC 5 cut(s) 31, 154, 198, 1565, 1701
BstMAI GTCTC 2 cut(s) 740, 1813
BstMBI GATC 5 cut(s) 28, 151, 195, 1562, 1698
BstMCI CGRYCG 1 cut(s) 857
BstMWI GCNNNNNNNGC 1 cut(s) 1105
BstNI CCWGG 3 cut(s) 318, 415, 603
BstNSI RCATGY 2 cut(s) 84, 1196
BstSCI CCNGG 4 cut(s) 316, 413, 601, 856
BstSFI CTRYAG 2 cut(s) 525, 665
BstV1I GCAGC 7 cut(s) 21, 266, 688, 974, 1208, 1211, 1698
BstX2I RGATCY 2 cut(s) 1562, 1698
BstYI RGATCY 2 cut(s) 1562, 1698
Bsu15I ATCGAT 1 cut(s) 714
BsuI GTATCC 1 cut(s) 391
BsuRI GGCC 1 cut(s) 459
BsuTUI ATCGAT 1 cut(s) 714
BtsCI GGATG 6 cut(s) 434, 455, 1030, 1333, 1662, 1824
BtsI GCAGTG 2 cut(s) 706, 1563
BtsIMutI CAGTG 4 cut(s) 624, 706, 756, 1563
Cac8I GCNNGC 4 cut(s) 7, 967, 1194, 1785
CciI TCATGA 1 cut(s) 1578
CfoI GCGC 2 cut(s) 947, 1556
Cfr13I GGNCC 3 cut(s) 458, 690, 972
ClaI ATCGAT 1 cut(s) 714
Csp6I GTAC 6 cut(s) 43, 75, 373, 559, 812, 1461
CviQI GTAC 6 cut(s) 43, 75, 373, 559, 812, 1461
DdeI CTNAG 2 cut(s) 361, 555
DpnI GATC 5 cut(s) 30, 153, 197, 1564, 1700
DpnII GATC 5 cut(s) 28, 151, 195, 1562, 1698
DraI TTTAAA 2 cut(s) 106, 646
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
Eco24I GRGCYC 1 cut(s) 775
Eco32I GATATC 1 cut(s) 733
Eco47I GGWCC 2 cut(s) 690, 972
Eco57I CTGAAG 1 cut(s) 1425
EcoRII CCWGG 3 cut(s) 316, 413, 601
EcoRV GATATC 1 cut(s) 733
EcoT22I ATGCAT 1 cut(s) 637
EcoT38I GRGCYC 1 cut(s) 775
FaqI GGGAC 1 cut(s) 1027
FauI CCCGC 1 cut(s) 136
FauNDI CATATG 2 cut(s) 540, 1746
FblI GTMKAC 1 cut(s) 1776
Fnu4HI GCNGC 8 cut(s) 10, 255, 702, 963, 1197, 1200, 1687, 1788
FokI GGATG 5 cut(s) 441, 462, 1037, 1340, 1649
FriOI GRGCYC 1 cut(s) 775
Fsp4HI GCNGC 8 cut(s) 10, 255, 702, 963, 1197, 1200, 1687, 1788
FspBI CTAG 4 cut(s) 654, 1551, 1652, 1803
GlaI GCGC 2 cut(s) 946, 1555
GluI GCNGC 8 cut(s) 10, 255, 702, 963, 1197, 1200, 1687, 1788
GsuI CTGGAG 1 cut(s) 1455
HaeIII GGCC 1 cut(s) 459
HapII CCGG 2 cut(s) 191, 857
HhaI GCGC 2 cut(s) 947, 1556
Hin6I GCGC 2 cut(s) 945, 1554
HinP1I GCGC 2 cut(s) 945, 1554
HincII GTYRAC 3 cut(s) 1084, 1184, 1357
HindII GTYRAC 3 cut(s) 1084, 1184, 1357
HindIII AAGCTT 1 cut(s) 326
HpaII CCGG 2 cut(s) 191, 857
HphI GGTGA 2 cut(s) 220, 1535
Hpy166II GTNNAC 6 cut(s) 375, 936, 1084, 1184, 1357, 1777
Hpy188I TCNGA 6 cut(s) 351, 919, 1405, 1438, 1483, 1759
Hpy188III TCNNGA 6 cut(s) 263, 616, 688, 736, 1472, 1579
Hpy8I GTNNAC 6 cut(s) 375, 936, 1084, 1184, 1357, 1777
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 3 cut(s) 53, 651, 1576
HpyCH4III ACNGT 4 cut(s) 511, 751, 760, 1681
HpyCH4IV ACGT 1 cut(s) 1255
HpyCH4V TGCA 9 cut(s) 432, 635, 711, 962, 1192, 1196, 1313, 1338, 1767
HpyF10VI GCNNNNNNNGC 1 cut(s) 1105
HpyF3I CTNAG 2 cut(s) 361, 555
HpySE526I ACGT 1 cut(s) 1255
HspAI GCGC 2 cut(s) 945, 1554
Kzo9I GATC 5 cut(s) 28, 151, 195, 1562, 1698
LmnI GCTCC 1 cut(s) 828
Lsp1109I GCAGC 7 cut(s) 21, 266, 688, 974, 1208, 1211, 1698
LweI GCATC 7 cut(s) 419, 520, 644, 720, 1325, 1438, 1596
MaeI CTAG 4 cut(s) 654, 1551, 1652, 1803
MaeII ACGT 1 cut(s) 1255
MaeIII GTNAC 3 cut(s) 356, 622, 781
MalI GATC 5 cut(s) 30, 153, 197, 1564, 1700
MbiI CCGCTC 1 cut(s) 1787
MboI GATC 5 cut(s) 28, 151, 195, 1562, 1698
MfeI CAATTG 1 cut(s) 1278
MflI RGATCY 2 cut(s) 1562, 1698
MhlI GDGCHC 1 cut(s) 775
MlyI GAGTC 5 cut(s) 142, 346, 1011, 1404, 1815
Mph1103I ATGCAT 1 cut(s) 637
MroXI GAANNNNTTC 1 cut(s) 232
MseI TTAA 9 cut(s) 105, 240, 645, 1115, 1146, 1178, 1211, 1293, 1416
MslI CAYNNNNRTG 3 cut(s) 162, 380, 437
MspA1I CMGCKG 2 cut(s) 12, 257
MspI CCGG 2 cut(s) 191, 857
MspR9I CCNGG 4 cut(s) 318, 415, 603, 858
MunI CAATTG 1 cut(s) 1278
MvaI CCWGG 3 cut(s) 318, 415, 603
MwoI GCNNNNNNNGC 1 cut(s) 1105
NciI CCSGG 1 cut(s) 858
NdeI CATATG 2 cut(s) 540, 1746
NdeII GATC 5 cut(s) 28, 151, 195, 1562, 1698
NlaIV GGNNCC 2 cut(s) 186, 692
NmuCI GTSAC 1 cut(s) 622
NsiI ATGCAT 1 cut(s) 637
NspI RCATGY 2 cut(s) 84, 1196
NspV TTCGAA 1 cut(s) 1075
OliI CACNNNNGTG 1 cut(s) 162
PaeI GCATGC 1 cut(s) 1196
PagI TCATGA 1 cut(s) 1578
PciI ACATGT 1 cut(s) 80
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 232
PfeI GAWTC 5 cut(s) 233, 850, 1069, 1344, 1573
PkrI GCNGC 8 cut(s) 11, 256, 703, 964, 1198, 1201, 1688, 1789
PleI GAGTC 5 cut(s) 141, 346, 1010, 1403, 1814
PpsI GAGTC 5 cut(s) 141, 346, 1010, 1403, 1814
PscI ACATGT 1 cut(s) 80
PshBI ATTAAT 1 cut(s) 1115
PsiI TTATAA 1 cut(s) 1053
Psp6I CCWGG 3 cut(s) 316, 413, 601
PspGI CCWGG 3 cut(s) 316, 413, 601
PspN4I GGNNCC 2 cut(s) 186, 692
PspPI GGNCC 3 cut(s) 458, 690, 972
PsuI RGATCY 2 cut(s) 1562, 1698
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 6 cut(s) 44, 76, 374, 560, 813, 1462
RsaNI GTAC 6 cut(s) 43, 75, 373, 559, 812, 1461
RseI CAYNNNNRTG 3 cut(s) 162, 380, 437
SaqAI TTAA 9 cut(s) 105, 240, 645, 1115, 1146, 1178, 1211, 1293, 1416
SatI GCNGC 8 cut(s) 10, 255, 702, 963, 1197, 1200, 1687, 1788
Sau3AI GATC 5 cut(s) 28, 151, 195, 1562, 1698
Sau96I GGNCC 3 cut(s) 458, 690, 972
SchI GAGTC 5 cut(s) 142, 346, 1011, 1404, 1815
ScrFI CCNGG 4 cut(s) 318, 415, 603, 858
SduI GDGCHC 1 cut(s) 775
SfaNI GCATC 7 cut(s) 419, 520, 644, 720, 1325, 1438, 1596
SfcI CTRYAG 2 cut(s) 525, 665
SfuI TTCGAA 1 cut(s) 1075
SinI GGWCC 2 cut(s) 690, 972
SmiMI CAYNNNNRTG 3 cut(s) 162, 380, 437
SphI GCATGC 1 cut(s) 1196
SsiI CCGC 6 cut(s) 12, 143, 286, 680, 1506, 1787
SspMI CTAG 4 cut(s) 654, 1551, 1652, 1803
StyD4I CCNGG 4 cut(s) 316, 413, 601, 856
TaaI ACNGT 4 cut(s) 511, 751, 760, 1681
TaiI ACGT 1 cut(s) 1258
TatI WGTACW 2 cut(s) 372, 558
TauI GCSGC 1 cut(s) 1790
TfiI GAWTC 5 cut(s) 233, 850, 1069, 1344, 1573
Tru1I TTAA 9 cut(s) 105, 240, 645, 1115, 1146, 1178, 1211, 1293, 1416
Tru9I TTAA 9 cut(s) 105, 240, 645, 1115, 1146, 1178, 1211, 1293, 1416
TscAI CASTG 4 cut(s) 631, 713, 763, 1563
TseFI GTSAC 1 cut(s) 622
TseI GCWGC 7 cut(s) 9, 254, 701, 962, 1196, 1199, 1686
Tsp45I GTSAC 1 cut(s) 622
TspRI CASTG 4 cut(s) 631, 713, 763, 1563
VpaK11BI GGWCC 2 cut(s) 690, 972
VspI ATTAAT 1 cut(s) 1115
XapI RAATTY 5 cut(s) 345, 481, 1047, 1092, 1219
XceI RCATGY 2 cut(s) 84, 1196
XmiI GTMKAC 1 cut(s) 1776
XmnI GAANNNNTTC 1 cut(s) 232
XspI CTAG 4 cut(s) 654, 1551, 1652, 1803
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.