FvH4_3g09811

serine-type endopeptidase inhibitor activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
5724631 .. 5725054
424 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g09811.t1

Sequence Viewer

Length: 354 bp
ATGTGTTTGCTTCTTCCAGATGCAATTGATGGGCTACCAGCTCTGGAGCATAGGGTTTGTTCAGAGACAGGGTTTATGGATGCTCATCTTAGTTCATGGGAAAGTGTTGAAGTTGGGCTGATGGCTCGTGACTCGAATATGTATCATCAAGCCATAATTGAAGTGAATGAAAAAGACACGACTGCTGCAGCTGCTACAGTTGATGATGGTATGGCTTTTGCTTTGTTTGAAGATTGTGTGATTAAAAAGAAAGAAGACTTTGTGGCGGATTACCCATTCATGTTTCTGATAAAGGAAGATAGGACCGGAACAGTGCTGTTCATGGGACATGTGCTCTATCCTCTTGATGACTGA

Protein Analysis

118

Amino Acids

13.07

Weight (kDa)

4.34

Isoelectric Point (pI)

29.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 45 - 114 7e-16 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 266
AflIII ACRYGT 1 cut(s) 328
AgsI TTSAA 3 cut(s) 110, 161, 230
AluBI AGCT 2 cut(s) 41, 191
AluI AGCT 2 cut(s) 41, 191
Alw21I GWGCWC 1 cut(s) 336
Alw26I GTCTC 1 cut(s) 59
ApeKI GCWGC 3 cut(s) 185, 188, 191
AspS9I GGNCC 1 cut(s) 303
AvaII GGWCC 1 cut(s) 303
BauI CACGAG 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 1 cut(s) 336
BbvI GCAGC 3 cut(s) 172, 178, 200
BccI CCATC 3 cut(s) 23, 115, 200
BcoDI GTCTC 1 cut(s) 59
BfmI CTRYAG 2 cut(s) 186, 195
BisI GCNGC 3 cut(s) 186, 189, 192
BlsI GCNGC 3 cut(s) 187, 190, 193
Bme18I GGWCC 1 cut(s) 303
BmgT120I GGNCC 1 cut(s) 303
BmsI GCATC 2 cut(s) 10, 70
BpiI GAAGAC 1 cut(s) 261
BpmI CTGGAG 1 cut(s) 65
BsaBI GATNNNNATC 1 cut(s) 84
BsaWI WCCGGW 1 cut(s) 305
Bse8I GATNNNNATC 1 cut(s) 84
BseGI GGATG 1 cut(s) 85
BseJI GATNNNNATC 1 cut(s) 84
BseXI GCAGC 3 cut(s) 172, 178, 200
BsiHKAI GWGCWC 1 cut(s) 336
BsiSI CCGG 1 cut(s) 306
BslFI GGGAC 1 cut(s) 339
BsmAI GTCTC 1 cut(s) 59
BsmFI GGGAC 1 cut(s) 339
Bsp1286I GDGCHC 1 cut(s) 336
BspACI CCGC 1 cut(s) 266
BspMAI CTGCAG 1 cut(s) 190
BssSI CACGAG 1 cut(s) 126
Bst2BI CACGAG 1 cut(s) 126
Bst4CI ACNGT 2 cut(s) 199, 313
BstDEI CTNAG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 85
BstMAI GTCTC 1 cut(s) 59
BstMWI GCNNNNNNNGC 1 cut(s) 191
BstNSI RCATGY 1 cut(s) 332
BstSFI CTRYAG 2 cut(s) 186, 195
BstV1I GCAGC 3 cut(s) 172, 178, 200
BstV2I GAAGAC 1 cut(s) 261
BtsCI GGATG 1 cut(s) 85
BtsIMutI CAGTG 1 cut(s) 318
Cfr13I GGNCC 1 cut(s) 303
CviAII CATG 4 cut(s) 96, 280, 322, 329
CviJI RGCY 7 cut(s) 34, 41, 118, 125, 152, 191, 215
CviKI_1 RGCY 7 cut(s) 34, 41, 118, 125, 152, 191, 215
DdeI CTNAG 1 cut(s) 89
EciI GGCGGA 1 cut(s) 281
Eco47I GGWCC 1 cut(s) 303
FaeI CATG 4 cut(s) 99, 283, 325, 332
FaiI YATR 9 cut(s) 51, 77, 97, 140, 155, 212, 281, 323, 330
FaqI GGGAC 1 cut(s) 339
FatI CATG 4 cut(s) 95, 279, 321, 328
Fnu4HI GCNGC 3 cut(s) 186, 189, 192
FokI GGATG 1 cut(s) 92
Fsp4HI GCNGC 3 cut(s) 186, 189, 192
GluI GCNGC 3 cut(s) 186, 189, 192
GsuI CTGGAG 1 cut(s) 65
HapII CCGG 1 cut(s) 306
Hin1II CATG 4 cut(s) 99, 283, 325, 332
HinfI GANTC 1 cut(s) 131
HpaII CCGG 1 cut(s) 306
Hpy188I TCNGA 2 cut(s) 64, 288
Hpy188III TCNNGA 4 cut(s) 17, 44, 128, 344
HpyCH4III ACNGT 2 cut(s) 199, 313
HpyCH4V TGCA 2 cut(s) 23, 188
HpyF10VI GCNNNNNNNGC 1 cut(s) 191
HpyF3I CTNAG 1 cut(s) 89
Hsp92II CATG 4 cut(s) 99, 283, 325, 332
LmnI GCTCC 1 cut(s) 46
LpnPI CCDG 5 cut(s) 29, 30, 51, 54, 319
Lsp1109I GCAGC 3 cut(s) 172, 178, 200
LweI GCATC 2 cut(s) 10, 70
MaeIII GTNAC 1 cut(s) 128
MboII GAAGA 4 cut(s) 5, 242, 266, 308
MfeI CAATTG 1 cut(s) 24
MhlI GDGCHC 1 cut(s) 336
MluCI AATT 2 cut(s) 24, 156
MlyI GAGTC 1 cut(s) 125
MnlI CCTC 1 cut(s) 351
MseI TTAA 1 cut(s) 243
MspA1I CMGCKG 1 cut(s) 191
MspI CCGG 1 cut(s) 306
MunI CAATTG 1 cut(s) 24
MwoI GCNNNNNNNGC 1 cut(s) 191
NlaIII CATG 4 cut(s) 99, 283, 325, 332
NmuCI GTSAC 1 cut(s) 128
NspI RCATGY 1 cut(s) 332
PciI ACATGT 1 cut(s) 328
PkrI GCNGC 3 cut(s) 187, 190, 193
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
PscI ACATGT 1 cut(s) 328
PspPI GGNCC 1 cut(s) 303
PstI CTGCAG 1 cut(s) 190
PvuII CAGCTG 1 cut(s) 191
SaqAI TTAA 1 cut(s) 243
SatI GCNGC 3 cut(s) 186, 189, 192
Sau96I GGNCC 1 cut(s) 303
SchI GAGTC 1 cut(s) 125
SduI GDGCHC 1 cut(s) 336
SetI ASST 2 cut(s) 43, 193
SfaNI GCATC 2 cut(s) 10, 70
SfcI CTRYAG 2 cut(s) 186, 195
SinI GGWCC 1 cut(s) 303
Sse9I AATT 2 cut(s) 24, 156
SsiI CCGC 1 cut(s) 266
TaaI ACNGT 2 cut(s) 199, 313
TaqI TCGA 1 cut(s) 134
TasI AATT 2 cut(s) 24, 156
Tru1I TTAA 1 cut(s) 243
Tru9I TTAA 1 cut(s) 243
TscAI CASTG 1 cut(s) 318
TseFI GTSAC 1 cut(s) 128
TseI GCWGC 3 cut(s) 185, 188, 191
Tsp45I GTSAC 1 cut(s) 128
TspDTI ATGAA 4 cut(s) 84, 183, 268, 310
TspRI CASTG 1 cut(s) 318
VpaK11BI GGWCC 1 cut(s) 303
XceI RCATGY 1 cut(s) 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.