Rh7DG093500

Nuclear pore complex protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
7853589 .. 7857984
4396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG093500.1

Sequence Viewer

Length: 2451 bp
ATGTTTGGTTCTACGAGCCCTTTTGGGCAGTCATCTAACAGCCCATTTGGGTCCCAATCGGTGTTTGGGCAAAGCAGCAACACAAGTAACAATCCTTTTGCTCCCCAGCCCTTTGGTAGCACCACTCCATTTGGTGCCCAGACAGGGAGTTCTCTAATTTGGGGTACTTCAACTGGCGTATTTGGTCAAACCCAATCCTCCCCTTTTGGTGCTTCATCCTCGCCAGCTTTCGGACAGCACAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCACCATCATCTACTCAAACAAGTCCATTTGGTGGAGCATCTGGTACGTCTGCTTTTGGTCAGAAGCCCGCTTTTGGAGCATTTGGGTCGAGTCCTGCTCAAACAAGTCCATTTGGAAGCACAGCTCAACCATCACAACCAGCATTTGGAAGCAATATGTTTGGTACCACCTCTACAACATTTGGCGCAAGTCAACCTGCATTTGGCACTAATACTGCCCCAGCCTTTGGTTCAACGAATGCCACAGGCTTTGGTGGCCAGAGCACCCCTGGTTTTGGTGGCCAAGGCACTCCAGCCTTTGGGGCCACAAGCGCTTCATCTTTTGGTAGTACAAGTACTCCGGCGTTTGGTGCTCCAAGTACTCCTACCTTTGGCTCAACACCAAGTCCTACATTTGGAAGCACAGGATCTGCATTTGGGACAACAAGTTCCAACTTGTTTGGATCAGGGGGAGCATTTGGGGCTTCAACCACCCCAGCTTTTGGTCAATCTAGCTCAGCTTTTGGTACTACAACAAGTGCTCCTGCTTTTGGTCAATCAAGTTCAGGTTTTGGCTTTTCAACAAGTGCTCCTGCATTTGGCCAATCAAGTTCAACCTTTGGTAGCACCCAATTTGCGGCTTCATCTCCTTTCGGAGCGCAGAGTTCGCCATTTGGGGCTCAATCAACAACACCAACACTTGGAAACACTGCCTTTGGACAGCCAGCTTTTGGGGGCCAACGGGGTGGAAGTAGAGTGGCTGCTTACACAGGCACATCTGAACCAGATAGTAATGGAATGGGGAAATTGGAGTCAATATCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAATTGAGATGGGAGGATTACCAATTAGGGGATAAGGGTGGACCGTCTCCTGCTGGTGCGGGTAGCTTTGGTGTATCAACTGTTCAGACTAGTACTTTGAATCCTAATCCTGCACCATCGTTTTCTCAAACATCTTCAAGTCCTTTTAATACCTCAACCTCATCTGGTTTATTTGCCCAAAAACCCTCATCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATGTTTTTACACCTGCATCATCTGCGTCACCATTTGGCCAAACGTTGTCTCCAGCTATTTTTAGTTCACCGTCTTCCTTTTCATTCTCTACCCCGGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCCTGTGGTTCAAACTTGTTCAATAATACTTCCAGTTTGCAGAGCAGTTCATTGGGTACTACAAGCAACCAACTGGGTATTACTCAACCAGCTCCTGCTTTTCCTACTTTTCAGACATCTCAGCCTCTTCAGACTAGTCCTTTTGGCTTCAGCAACACCAACACCTTTAATCAACCACAGCCAGGCAACACAAGTGCCTTTTGTGGTTTAGCAGGCATTTCTGGTCAGAGCAACTTTGGACAATCGTCTGTGGCTCAAGGCTCTGCAGCTGTACAACAACCAGTACCTGCTACAAATCCATTTGGAACGCTCCCTGCGATGCCTCAGATGTCAATTGCTCCTTATCAGAAGCCTGATTCTGGAACTACTACTTCTGTCACTTCTGGCACTAGTATCACCGTAAACCCAACTTCTGGTACTGCTGTCACTATAACCCCCAGTCCTGGCAGTACTGTCACCATAACCATCTCAATTTCTGGTAGTACTACTATCAATATATCCCCCACTTCTGAAACTACCTCAAGTAATACACCTTCGCCAACTGGAGAAACTTCATCTCCATTTGTAAGTATCGAGAACTTAATCTTCTGGTGGATTGTAGTATGCTATCTCCTCTGCTGGCTTTGTGGCAACCTGAGCTTTAGGCTTCCCCATCCTGCCCCAAAGTCTCCGAGTTTATCTCAACCCTTCAACAGTTTGGATAAAAAACCACCAGATGATGGTGTTGACTTTGTATATTGGCTACAGCTGTACAACCAATACATTCTACAAGCTCATCTCTGGTTCCAATTCCTGTTCCTGCACAGCCAATTGAAGATGGTGTCAGAGAATCCATTAAAAACCAGAACGATGTCACGCTGGGAATCACAAAGCAATTGCTTCTGGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

816

Amino Acids

82.8

Weight (kDa)

6.51

Isoelectric Point (pI)

65.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 359 - 378 2.6e-06 Nup98, Gle2-binding sequence
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1408
Acc36I ACCTGC 3 cut(s) 484, 1408, 1855
Acc65I GGTACC 1 cut(s) 443
AccB1I GGYRCC 2 cut(s) 134, 443
AciI CCGC 3 cut(s) 348, 896, 1172
AclI AACGTT 1 cut(s) 1430
AclWI GGATC 2 cut(s) 694, 730
AcoI YGGCCR 4 cut(s) 535, 559, 859, 1423
AcuI CTGAAG 2 cut(s) 1673, 1693
AfeI AGCGCT 1 cut(s) 592
AhlI ACTAGT 3 cut(s) 1202, 1694, 1949
AjnI CCWGG 3 cut(s) 547, 1741, 2002
AloI GAACNNNNNNTCC 2 cut(s) 691, 723
Alw21I GWGCWC 5 cut(s) 283, 545, 634, 802, 850
Alw26I GTCTC 3 cut(s) 1164, 1440, 2232
Alw44I GTGCAC 1 cut(s) 279
AlwI GGATC 2 cut(s) 694, 730
AlwNI CAGNNNCTG 3 cut(s) 689, 1655, 1847
Aor51HI AGCGCT 1 cut(s) 592
AoxI GGCC 6 cut(s) 535, 559, 582, 859, 994, 1423
ApaLI GTGCAC 1 cut(s) 279
ApeKI GCWGC 3 cut(s) 75, 1019, 1826
ArsI GACNNNNNNTTYG 2 cut(s) 1192, 1224
Asp718I GGTACC 1 cut(s) 443
AspLEI GCGC 3 cut(s) 467, 593, 919
AspS9I GGNCC 4 cut(s) 51, 582, 994, 1154
AsuC2I CCSGG 1 cut(s) 1481
AsuHPI GGTGA 6 cut(s) 1332, 1350, 1407, 1446, 1948, 2008
AvaII GGWCC 2 cut(s) 51, 1154
BaeGI GKGCMC 2 cut(s) 139, 283
BaeI ACNNNNGTAYC 2 cut(s) 1968, 2001
BalI TGGCCA 4 cut(s) 537, 561, 861, 1425
BanI GGYRCC 2 cut(s) 134, 443
BanII GRGCYC 2 cut(s) 20, 940
BarI GAAGNNNNNNTAC 2 cut(s) 2077, 2109
BauI CACGAG 1 cut(s) 1109
BbsI GAAGAC 1 cut(s) 1452
Bbv12I GWGCWC 5 cut(s) 283, 545, 634, 802, 850
BbvI GCAGC 3 cut(s) 87, 1006, 1838
BccI CCATC 9 cut(s) 292, 418, 1116, 1237, 1528, 2033, 2220, 2273, 2371
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 3 cut(s) 549, 1743, 2004
BcnI CCSGG 1 cut(s) 1481
BcoDI GTCTC 3 cut(s) 1164, 1440, 2232
BcuI ACTAGT 3 cut(s) 1202, 1694, 1949
BfaI CTAG 4 cut(s) 771, 1203, 1695, 1950
BfmI CTRYAG 2 cut(s) 1824, 2303
BfoI RGCGCY 1 cut(s) 594
BfuAI ACCTGC 3 cut(s) 484, 1408, 1855
BglI GCCNNNNNGGC 1 cut(s) 581
BisI GCNGC 4 cut(s) 76, 897, 1020, 1827
BlpI GCTNAGC 1 cut(s) 775
BlsI GCNGC 4 cut(s) 77, 898, 1021, 1828
BmcAI AGTACT 5 cut(s) 616, 640, 1207, 2011, 2044
Bme1390I CCNGG 4 cut(s) 549, 1481, 1743, 2004
Bme18I GGWCC 2 cut(s) 51, 1154
BmgT120I GGNCC 4 cut(s) 51, 582, 994, 1154
BmiI GGNNCC 7 cut(s) 52, 53, 136, 445, 583, 995, 2345
BmrFI CCNGG 4 cut(s) 549, 1481, 1743, 2004
BmrI ACTGGG 2 cut(s) 1643, 1992
BmsI GCATC 4 cut(s) 266, 326, 1412, 1869
BmuI ACTGGG 2 cut(s) 1643, 1992
BoxI GACNNNNGTC 1 cut(s) 1804
BpiI GAAGAC 1 cut(s) 1452
BplI GAGNNNNNCTC 4 cut(s) 361, 393, 2224, 2256
BpmI CTGGAG 4 cut(s) 252, 555, 1422, 2124
Bpu10I CCTNAGC 1 cut(s) 2195
Bpu1102I GCTNAGC 1 cut(s) 775
BpuEI CTTGAG 2 cut(s) 1800, 2065
BpuMI CCSGG 1 cut(s) 1481
BsaJI CCNNGG 3 cut(s) 547, 562, 1479
Bse1I ACTGG 7 cut(s) 178, 1321, 1593, 1638, 1841, 1998, 2107
Bse3DI GCAATG 1 cut(s) 1089
BseBI CCWGG 3 cut(s) 549, 1743, 2004
BseDI CCNNGG 3 cut(s) 547, 562, 1479
BseGI GGATG 5 cut(s) 215, 1301, 1490, 2212, 2451
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 4 cut(s) 789, 1694, 1898, 2186
BseNI ACTGG 7 cut(s) 178, 1321, 1593, 1638, 1841, 1998, 2107
BseRI GAGGAG 1 cut(s) 2162
BseSI GKGCMC 2 cut(s) 139, 283
BseXI GCAGC 3 cut(s) 87, 1006, 1838
BseYI CCCAGC 4 cut(s) 105, 499, 754, 2418
BsgI GTGCAG 2 cut(s) 1209, 2345
BshFI GGCC 6 cut(s) 537, 561, 584, 861, 996, 1425
BshNI GGYRCC 2 cut(s) 134, 443
BsiHKAI GWGCWC 5 cut(s) 283, 545, 634, 802, 850
BsiSI CCGG 2 cut(s) 620, 1481
BslFI GGGAC 2 cut(s) 37, 712
BsmAI GTCTC 3 cut(s) 1164, 1440, 2232
BsmBI CGTCTC 1 cut(s) 1164
BsmFI GGGAC 2 cut(s) 37, 712
BsmI GAATGC 1 cut(s) 523
BsnI GGCC 6 cut(s) 537, 561, 584, 861, 996, 1425
Bsp1286I GDGCHC 8 cut(s) 20, 139, 283, 545, 634, 802, 850, 940
Bsp1407I TGTACA 2 cut(s) 1831, 2310
Bsp143I GATC 2 cut(s) 686, 722
Bsp1720I GCTNAGC 1 cut(s) 775
BspACI CCGC 3 cut(s) 348, 896, 1172
BspANI GGCC 6 cut(s) 537, 561, 584, 861, 996, 1425
BspCNI CTCAG 4 cut(s) 788, 1693, 1897, 2187
BspLI GGNNCC 7 cut(s) 52, 53, 136, 445, 583, 995, 2345
BspMAI CTGCAG 1 cut(s) 1828
BspMI ACCTGC 3 cut(s) 484, 1408, 1855
BspPI GGATC 2 cut(s) 694, 730
BspT107I GGYRCC 2 cut(s) 134, 443
BsrDI GCAATG 1 cut(s) 1089
BsrGI TGTACA 2 cut(s) 1831, 2310
BsrI ACTGG 7 cut(s) 178, 1321, 1593, 1638, 1841, 1998, 2107
BssECI CCNNGG 3 cut(s) 547, 562, 1479
BssMI GATC 2 cut(s) 686, 722
BssSI CACGAG 1 cut(s) 1109
BssT1I CCWWGG 1 cut(s) 562
Bst2BI CACGAG 1 cut(s) 1109
Bst2UI CCWGG 3 cut(s) 549, 1743, 2004
Bst4CI ACNGT 9 cut(s) 242, 1158, 1195, 1362, 1458, 1539, 1960, 2014, 2255
Bst6I CTCTTC 1 cut(s) 1692
BstAPI GCANNNNNTGC 2 cut(s) 278, 1409
BstAUI TGTACA 2 cut(s) 1831, 2310
BstC8I GCNNGC 6 cut(s) 225, 348, 984, 1089, 1774, 2180
BstDEI CTNAG 4 cut(s) 775, 1680, 1884, 2195
BstF5I GGATG 5 cut(s) 215, 1301, 1490, 2212, 2451
BstH2I RGCGCY 1 cut(s) 594
BstHHI GCGC 3 cut(s) 467, 593, 919
BstKTI GATC 2 cut(s) 689, 725
BstMAI GTCTC 3 cut(s) 1164, 1440, 2232
BstMBI GATC 2 cut(s) 686, 722
BstNI CCWGG 3 cut(s) 549, 1743, 2004
BstPAI GACNNNNGTC 1 cut(s) 1804
BstSCI CCNGG 4 cut(s) 547, 1479, 1741, 2002
BstSFI CTRYAG 2 cut(s) 1824, 2303
BstSLI GKGCMC 2 cut(s) 139, 283
BstV1I GCAGC 3 cut(s) 87, 1006, 1838
BstV2I GAAGAC 1 cut(s) 1452
BstX2I RGATCY 1 cut(s) 686
BstXI CCANNNNNNTGG 2 cut(s) 113, 1004
BstYI RGATCY 1 cut(s) 686
BsuRI GGCC 6 cut(s) 537, 561, 584, 861, 996, 1425
BtgZI GCGATG 1 cut(s) 1892
BtsCI GGATG 5 cut(s) 215, 1301, 1490, 2212, 2451
BtsI GCAGTG 1 cut(s) 966
BtsIMutI CAGTG 1 cut(s) 966
BveI ACCTGC 3 cut(s) 484, 1408, 1855
Cac8I GCNNGC 6 cut(s) 225, 348, 984, 1089, 1774, 2180
CaiI CAGNNNCTG 3 cut(s) 689, 1655, 1847
CfoI GCGC 3 cut(s) 467, 593, 919
Cfr13I GGNCC 4 cut(s) 51, 582, 994, 1154
CseI GACGC 1 cut(s) 1401
CspCI CAANNNNNGTGG 4 cut(s) 112, 147, 511, 546
DdeI CTNAG 4 cut(s) 775, 1680, 1884, 2195
DpnI GATC 2 cut(s) 688, 724
DpnII GATC 2 cut(s) 686, 722
EaeI YGGCCR 4 cut(s) 535, 559, 859, 1423
Eam1104I CTCTTC 1 cut(s) 1692
EarI CTCTTC 1 cut(s) 1692
Eco130I CCWWGG 1 cut(s) 562
Eco24I GRGCYC 2 cut(s) 20, 940
Eco47I GGWCC 2 cut(s) 51, 1154
Eco47III AGCGCT 1 cut(s) 592
Eco57I CTGAAG 2 cut(s) 1673, 1693
EcoO109I RGGNCCY 1 cut(s) 51
EcoRII CCWGG 3 cut(s) 547, 1741, 2002
EcoT14I CCWWGG 1 cut(s) 562
EcoT38I GRGCYC 2 cut(s) 20, 940
ErhI CCWWGG 1 cut(s) 562
Esp3I CGTCTC 1 cut(s) 1164
FaiI YATR 7 cut(s) 437, 1095, 1991, 2021, 2057, 2164, 2296
FaqI GGGAC 2 cut(s) 37, 712
FauI CCCGC 2 cut(s) 355, 1165
Fnu4HI GCNGC 4 cut(s) 76, 897, 1020, 1827
FokI GGATG 4 cut(s) 202, 1288, 1477, 2199
FriOI GRGCYC 2 cut(s) 20, 940
Fsp4HI GCNGC 4 cut(s) 76, 897, 1020, 1827
FspBI CTAG 4 cut(s) 771, 1203, 1695, 1950
GlaI GCGC 3 cut(s) 466, 592, 918
GluI GCNGC 4 cut(s) 76, 897, 1020, 1827
GsaI CCCAGC 4 cut(s) 109, 503, 758, 2422
GsuI CTGGAG 4 cut(s) 252, 555, 1422, 2124
HaeII RGCGCY 1 cut(s) 594
HaeIII GGCC 6 cut(s) 537, 561, 584, 861, 996, 1425
HapII CCGG 2 cut(s) 620, 1481
HgaI GACGC 1 cut(s) 1401
HhaI GCGC 3 cut(s) 467, 593, 919
Hin6I GCGC 3 cut(s) 465, 591, 917
HinP1I GCGC 3 cut(s) 465, 591, 917
HincII GTYRAC 2 cut(s) 473, 2287
HindII GTYRAC 2 cut(s) 473, 2287
HinfI GANTC 6 cut(s) 370, 1070, 1213, 1916, 2389, 2423
HpaII CCGG 2 cut(s) 620, 1481
HphI GGTGA 6 cut(s) 1332, 1350, 1407, 1446, 1948, 2008
Hpy166II GTNNAC 6 cut(s) 281, 473, 1154, 1454, 1963, 2287
Hpy188III TCNNGA 4 cut(s) 1109, 1920, 2134, 2443
Hpy8I GTNNAC 6 cut(s) 281, 473, 1154, 1454, 1963, 2287
HpyAV CCTTC 3 cut(s) 1320, 2103, 2257
HpyCH4III ACNGT 9 cut(s) 242, 1158, 1195, 1362, 1458, 1539, 1960, 2014, 2255
HpyCH4IV ACGT 2 cut(s) 326, 1430
HpyCH4V TGCA 9 cut(s) 281, 479, 692, 854, 1226, 1403, 1600, 1826, 2362
HpyF3I CTNAG 4 cut(s) 775, 1680, 1884, 2195
HpySE526I ACGT 2 cut(s) 326, 1430
HspAI GCGC 3 cut(s) 465, 591, 917
KflI GGGWCCC 1 cut(s) 51
KpnI GGTACC 1 cut(s) 447
Kzo9I GATC 2 cut(s) 686, 722
Lsp1109I GCAGC 3 cut(s) 87, 1006, 1838
LweI GCATC 4 cut(s) 266, 326, 1412, 1869
MaeI CTAG 4 cut(s) 771, 1203, 1695, 1950
MaeII ACGT 2 cut(s) 326, 1430
MaeIII GTNAC 8 cut(s) 86, 1106, 1327, 1413, 1936, 1984, 2014, 2412
MalI GATC 2 cut(s) 688, 724
MboI GATC 2 cut(s) 686, 722
MboII GAAGA 8 cut(s) 252, 1239, 1329, 1362, 1452, 1679, 2137, 2386
MfeI CAATTG 3 cut(s) 1893, 2369, 2434
MflI RGATCY 1 cut(s) 686
MhlI GDGCHC 8 cut(s) 20, 139, 283, 545, 634, 802, 850, 940
MlsI TGGCCA 4 cut(s) 537, 561, 861, 1425
MluNI TGGCCA 4 cut(s) 537, 561, 861, 1425
MlyI GAGTC 2 cut(s) 379, 1079
MmeI TCCRAC 1 cut(s) 735
Mox20I TGGCCA 4 cut(s) 537, 561, 861, 1425
MscI TGGCCA 4 cut(s) 537, 561, 861, 1425
MseI TTAA 5 cut(s) 1260, 1506, 1728, 2141, 2396
Msp20I TGGCCA 4 cut(s) 537, 561, 861, 1425
MspA1I CMGCKG 2 cut(s) 1829, 2308
MspI CCGG 2 cut(s) 620, 1481
MspR9I CCNGG 4 cut(s) 549, 1481, 1743, 2004
MunI CAATTG 3 cut(s) 1893, 2369, 2434
Mva1269I GAATGC 1 cut(s) 523
MvaI CCWGG 3 cut(s) 549, 1743, 2004
NciI CCSGG 1 cut(s) 1481
NdeII GATC 2 cut(s) 686, 722
NlaIV GGNNCC 7 cut(s) 52, 53, 136, 445, 583, 995, 2345
NmuCI GTSAC 6 cut(s) 1106, 1413, 1936, 1984, 2014, 2412
PaqCI CACCTGC 1 cut(s) 1408
PcsI WCGNNNNNNNCGW 1 cut(s) 1874
PctI GAATGC 1 cut(s) 523
PfeI GAWTC 4 cut(s) 1213, 1916, 2389, 2423
PkrI GCNGC 4 cut(s) 77, 898, 1021, 1828
PleI GAGTC 2 cut(s) 378, 1078
PpsI GAGTC 2 cut(s) 378, 1078
PpuMI RGGWCCY 1 cut(s) 51
PshAI GACNNNNGTC 1 cut(s) 1804
Psp1406I AACGTT 1 cut(s) 1430
Psp5II RGGWCCY 1 cut(s) 51
Psp6I CCWGG 3 cut(s) 547, 1741, 2002
PspFI CCCAGC 4 cut(s) 105, 499, 754, 2418
PspGI CCWGG 3 cut(s) 547, 1741, 2002
PspN4I GGNNCC 7 cut(s) 52, 53, 136, 445, 583, 995, 2345
PspPI GGNCC 4 cut(s) 51, 582, 994, 1154
PspPPI RGGWCCY 1 cut(s) 51
PsrI GAACNNNNNNTAC 2 cut(s) 1179, 1211
PstI CTGCAG 1 cut(s) 1828
PstNI CAGNNNCTG 3 cut(s) 689, 1655, 1847
PsuI RGATCY 1 cut(s) 686
PvuII CAGCTG 2 cut(s) 1829, 2308
SaqAI TTAA 5 cut(s) 1260, 1506, 1728, 2141, 2396
SatI GCNGC 4 cut(s) 76, 897, 1020, 1827
Sau3AI GATC 2 cut(s) 686, 722
Sau96I GGNCC 4 cut(s) 51, 582, 994, 1154
ScaI AGTACT 5 cut(s) 616, 640, 1207, 2011, 2044
SchI GAGTC 2 cut(s) 379, 1079
ScrFI CCNGG 4 cut(s) 549, 1481, 1743, 2004
SduI GDGCHC 8 cut(s) 20, 139, 283, 545, 634, 802, 850, 940
SfaNI GCATC 4 cut(s) 266, 326, 1412, 1869
SfcI CTRYAG 2 cut(s) 1824, 2303
SinI GGWCC 2 cut(s) 51, 1154
SmlI CTYRAG 2 cut(s) 1815, 2080
SmoI CTYRAG 2 cut(s) 1815, 2080
SpeI ACTAGT 3 cut(s) 1202, 1694, 1949
SsiI CCGC 3 cut(s) 348, 896, 1172
SspMI CTAG 4 cut(s) 771, 1203, 1695, 1950
StyD4I CCNGG 4 cut(s) 547, 1479, 1741, 2002
StyI CCWWGG 1 cut(s) 562
TaaI ACNGT 9 cut(s) 242, 1158, 1195, 1362, 1458, 1539, 1960, 2014, 2255
TaiI ACGT 2 cut(s) 329, 1433
TaqI TCGA 2 cut(s) 368, 2133
TatI WGTACW 8 cut(s) 608, 614, 638, 1205, 1831, 2009, 2042, 2310
TauI GCSGC 1 cut(s) 899
TfiI GAWTC 4 cut(s) 1213, 1916, 2389, 2423
Tru1I TTAA 5 cut(s) 1260, 1506, 1728, 2141, 2396
Tru9I TTAA 5 cut(s) 1260, 1506, 1728, 2141, 2396
TscAI CASTG 1 cut(s) 973
TseFI GTSAC 6 cut(s) 1106, 1413, 1936, 1984, 2014, 2412
TseI GCWGC 3 cut(s) 75, 1019, 1826
Tsp45I GTSAC 6 cut(s) 1106, 1413, 1936, 1984, 2014, 2412
TspDTI ATGAA 8 cut(s) 204, 585, 891, 1323, 1362, 1458, 1599, 2103
TspRI CASTG 1 cut(s) 973
VneI GTGCAC 1 cut(s) 279
VpaK11BI GGWCC 2 cut(s) 51, 1154
XcmI CCANNNNNNNNNTGG 2 cut(s) 62, 545
XspI CTAG 4 cut(s) 771, 1203, 1695, 1950
ZrmI AGTACT 5 cut(s) 616, 640, 1207, 2011, 2044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.