Rorug03G0004700

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000163
Physical Location & Seq
Reverse (-)
370106 .. 374536
4431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0004700.1

Sequence Viewer

Length: 1506 bp
ATGGGTTCCTGCTTGTCTGCAGAAAGCAGGAGCCCAATGGCCGGTTCTTCGCCGGCCTCTCCTGGCTGGGGAGCCGCCTCCCGCCGGAGGAAGAGCTCCAAGAAGAAATCTGCATCCCGCAATTCTTCATTTGATCACCGCCGGGAAGACCCCGCGCTGCATAGGATTCCGGGGAGAATGTTCCTTAATGGGTCTAGTGAAGTTGCTTCTTTGTTTACTCAACAGGGCAAGAAAGGAACCAACCAAGATGCCATGATTGTTTGGGAGAATTTTGGTTCAAGAACAGACACAGTTTTCTGTGGCGTTTTTGATGGCCATGGTCCATATGGTCATATGGTTGCTAAGAGAGTGAGGGATTCACTTCCTCTCAAGTTGAGCTCACACTGGGAAGTGAACTTAAACAGTGAGGAAGTTCTCAAAGAGATCAGCCCTAATACTGCAGGAAGCTTGAATTCAGATGATACCGCATTTGCGTCTGTTGATGAAGATTTCAGGGCCTCCATTGATTCTGGGGAATCAGAAAAGCACCCTGAGATCTTTCAGACACTGAAAGAGTCGTTCTTGAAAGCTTTCAAAGTTATGGACAGGGAACTGCGAATACAACCAAGTATCGATTGCTTTTGTAGTGGGACAACAGCAGTAACTCTAATTAAGCAGGGTCGGGATATAATCGTTGGAAATGTTGGGGACTCCAGAGCCGTTCTGTGCACAAGAGATAAAGATAACACTCTACTGGCAATTCAATTGACTGTGGATCTCAAACCAAATCTTCCAGCGGAAGCAGAAAGAATACGGAAGTGTAGAGGACGTGTTTTTGCTCTTCATGATGAACCAGAGGTTTGTCGGGTCTGGCTGCCAAACAATGACTCCCCTGGTCTCGCCATGGCACGGGCTTTTGGAGACTTTTGCCTCAAGGATTTTGGTCTGATCTCAGTGCCTGATTTATCCTATTGGCGTCTCACTGAGAAGGATGAATTTATAGTCTTAGCCACAGATGGGATTTGGGATGTTCTGTCTAACAAAGAAGTGGTAGACATTATAGCATCAGCCCCTGCACGTTCCTCTGCAGCTCGAGCGCTGGTTGAGTCAGCAGTTCGAGCCTGGAGACAGAAATACCCAACTTCCAAAGTAGACGACTGTGCTGTAGTTTGCCTATACCTCGACTCAGACACAAACAATTTATCAGCTGCTGCTAATAATAACTTGAGTGAGCAGCCTACTGCAGTGAATGAGGTGAATGCTGGGAGTGAGAATGAAGAAGATGTCTCTGTCCCAACTTCTATGGTCCGCTCAGGGACTGTCCGAAATGGCGAAGAGATTTTTCAAGACAAAGAAGATGAAGATGAAGAGGAAGAGAGAAGTAAGGAGAATGCCACAGAGGAACTTAACTCGGAATCGGGTATAGAGTGGTCTGCTCTGGAAGGAGTTTCTCGTGTTAACACATTGTTGACTTTGCCAAGGTTTGTGCCTGGAAAAGAAGACATGAAGGCCCGGAACAAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

501

Amino Acids

55.18

Weight (kDa)

5.14

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 180 - 365 2.6e-39 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1290
AccI GTMKAC 2 cut(s) 1032, 1131
AccII CGCG 1 cut(s) 155
AciI CCGC 8 cut(s) 75, 82, 118, 139, 153, 465, 776, 1288
AclWI GGATC 1 cut(s) 762
AcoI YGGCCR 2 cut(s) 39, 313
AcsI RAATTY 3 cut(s) 268, 451, 974
AcyI GRCGYC 1 cut(s) 955
AfeI AGCGCT 1 cut(s) 1077
AfiI CCNNNNNNNGG 7 cut(s) 41, 68, 84, 87, 888, 996, 1498
AflIII ACRYGT 1 cut(s) 808
AgsI TTSAA 6 cut(s) 279, 451, 565, 574, 743, 1325
AjiI CACGTC 1 cut(s) 809
AjnI CCWGG 4 cut(s) 61, 871, 1100, 1468
AjuI GAANNNNNNNTTGG 2 cut(s) 28, 60
AluBI AGCT 6 cut(s) 96, 378, 447, 569, 1070, 1187
AluI AGCT 6 cut(s) 96, 378, 447, 569, 1070, 1187
Alw21I GWGCWC 3 cut(s) 98, 380, 710
Alw26I GTCTC 5 cut(s) 881, 894, 962, 1099, 1270
Alw44I GTGCAC 1 cut(s) 706
AlwI GGATC 1 cut(s) 762
AlwNI CAGNNNCTG 5 cut(s) 547, 938, 1052, 1190, 1298
Ama87I CYCGRG 1 cut(s) 1071
Aor51HI AGCGCT 1 cut(s) 1077
AoxI GGCC 5 cut(s) 39, 54, 313, 495, 1488
ApaLI GTGCAC 1 cut(s) 706
ApeKI GCWGC 6 cut(s) 157, 853, 1067, 1187, 1190, 1213
ApoI RAATTY 3 cut(s) 268, 451, 974
Asp700I GAANNNNTTC 1 cut(s) 569
AspLEI GCGC 2 cut(s) 157, 1078
AspS9I GGNCC 4 cut(s) 320, 495, 1285, 1489
AsuC2I CCSGG 3 cut(s) 143, 171, 1492
AsuHPI GGTGA 2 cut(s) 128, 1246
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 2 cut(s) 320, 1285
BaeGI GKGCMC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 315
BanII GRGCYC 3 cut(s) 35, 98, 380
BauI CACGAG 1 cut(s) 1431
BbsI GAAGAC 2 cut(s) 153, 1485
Bbv12I GWGCWC 3 cut(s) 98, 380, 710
BbvI GCAGC 6 cut(s) 144, 840, 1079, 1174, 1177, 1225
BccI CCATC 2 cut(s) 305, 989
BceAI ACGGC 1 cut(s) 683
BciT130I CCWGG 4 cut(s) 63, 873, 1102, 1470
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 3 cut(s) 143, 171, 1492
BcoDI GTCTC 5 cut(s) 881, 894, 962, 1099, 1270
BfaI CTAG 1 cut(s) 195
BfmI CTRYAG 5 cut(s) 18, 438, 1065, 1143, 1221
BfoI RGCGCY 1 cut(s) 1079
BglII AGATCT 1 cut(s) 534
BisI GCNGC 7 cut(s) 75, 158, 854, 1068, 1188, 1191, 1214
BlsI GCNGC 7 cut(s) 76, 159, 855, 1069, 1189, 1192, 1215
Bme1390I CCNGG 7 cut(s) 63, 143, 171, 873, 1102, 1470, 1492
Bme18I GGWCC 2 cut(s) 320, 1285
BmeT110I CYCGRG 1 cut(s) 1071
BmgBI CACGTC 1 cut(s) 809
BmgT120I GGNCC 4 cut(s) 320, 495, 1285, 1489
BmiI GGNNCC 4 cut(s) 7, 32, 73, 238
BmrFI CCNGG 7 cut(s) 63, 143, 171, 873, 1102, 1470, 1492
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 3 cut(s) 122, 238, 1052
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 2 cut(s) 153, 1485
BpmI CTGGAG 2 cut(s) 676, 1123
Bpu10I CCTNAGC 1 cut(s) 1291
BpuEI CTTGAG 3 cut(s) 353, 896, 1225
BpuMI CCSGG 3 cut(s) 143, 171, 1492
Bsa29I ATCGAT 1 cut(s) 612
BsaHI GRCGYC 1 cut(s) 955
BsaI GGTCTC 1 cut(s) 881
BsaJI CCNNGG 5 cut(s) 170, 316, 871, 882, 1457
BsaXI ACNNNNNCTCC 2 cut(s) 851, 881
Bsc4I CCNNNNNNNGG 7 cut(s) 41, 68, 84, 87, 888, 996, 1498
Bse118I RCCGGY 2 cut(s) 41, 52
Bse1I ACTGG 2 cut(s) 389, 738
BseBI CCWGG 4 cut(s) 63, 873, 1102, 1470
BseCI ATCGAT 1 cut(s) 612
BseDI CCNNGG 5 cut(s) 170, 316, 871, 882, 1457
BseGI GGATG 3 cut(s) 113, 976, 1012
BseLI CCNNNNNNNGG 7 cut(s) 41, 68, 84, 87, 888, 996, 1498
BseMII CTCAG 5 cut(s) 522, 945, 954, 1179, 1305
BseNI ACTGG 2 cut(s) 389, 738
BseSI GKGCMC 1 cut(s) 710
BseXI GCAGC 6 cut(s) 144, 840, 1079, 1174, 1177, 1225
BseYI CCCAGC 2 cut(s) 66, 1241
BsgI GTGCAG 1 cut(s) 1038
Bsh1236I CGCG 1 cut(s) 155
BshFI GGCC 5 cut(s) 41, 56, 315, 497, 1490
BshVI ATCGAT 1 cut(s) 612
BsiHKAI GWGCWC 3 cut(s) 98, 380, 710
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 6 cut(s) 42, 53, 85, 142, 170, 1492
BslFI GGGAC 4 cut(s) 643, 701, 1256, 1309
BslI CCNNNNNNNGG 7 cut(s) 41, 68, 84, 87, 888, 996, 1498
BsmAI GTCTC 5 cut(s) 881, 894, 962, 1099, 1270
BsmBI CGTCTC 1 cut(s) 962
BsmFI GGGAC 4 cut(s) 643, 701, 1256, 1309
BsmI GAATGC 2 cut(s) 1243, 1375
BsnI GGCC 5 cut(s) 41, 56, 315, 497, 1490
Bso31I GGTCTC 1 cut(s) 881
BsoBI CYCGRG 1 cut(s) 1071
Bsp1286I GDGCHC 4 cut(s) 35, 98, 380, 710
Bsp143I GATC 5 cut(s) 133, 423, 534, 754, 927
Bsp19I CCATGG 2 cut(s) 316, 882
BspACI CCGC 8 cut(s) 75, 82, 118, 139, 153, 465, 776, 1288
BspANI GGCC 5 cut(s) 41, 56, 315, 497, 1490
BspCNI CTCAG 5 cut(s) 523, 944, 955, 1178, 1304
BspDI ATCGAT 1 cut(s) 612
BspFNI CGCG 1 cut(s) 155
BspHI TCATGA 1 cut(s) 823
BspLI GGNNCC 4 cut(s) 7, 32, 73, 238
BspMAI CTGCAG 4 cut(s) 22, 442, 1069, 1225
BspPI GGATC 1 cut(s) 762
BspQI GCTCTTC 2 cut(s) 86, 825
BspTNI GGTCTC 1 cut(s) 881
BsrBI CCGCTC 1 cut(s) 1290
BsrFI RCCGGY 2 cut(s) 41, 52
BsrI ACTGG 2 cut(s) 389, 738
BssAI RCCGGY 2 cut(s) 41, 52
BssECI CCNNGG 5 cut(s) 170, 316, 871, 882, 1457
BssMI GATC 5 cut(s) 133, 423, 534, 754, 927
BssNI GRCGYC 1 cut(s) 955
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 3 cut(s) 316, 882, 1457
Bst2BI CACGAG 1 cut(s) 1431
Bst2UI CCWGG 4 cut(s) 63, 873, 1102, 1470
Bst4CI ACNGT 5 cut(s) 292, 404, 751, 1139, 1300
Bst6I CTCTTC 5 cut(s) 86, 825, 1308, 1341, 1347
BstACI GRCGYC 1 cut(s) 955
BstC8I GCNNGC 1 cut(s) 54
BstDEI CTNAG 7 cut(s) 342, 531, 931, 963, 985, 1165, 1291
BstDSI CCRYGG 2 cut(s) 316, 882
BstF5I GGATG 3 cut(s) 113, 976, 1012
BstFNI CGCG 1 cut(s) 155
BstH2I RGCGCY 1 cut(s) 1079
BstHHI GCGC 2 cut(s) 157, 1078
BstKTI GATC 5 cut(s) 136, 426, 537, 757, 930
BstMAI GTCTC 5 cut(s) 881, 894, 962, 1099, 1270
BstMBI GATC 5 cut(s) 133, 423, 534, 754, 927
BstMWI GCNNNNNNNGC 2 cut(s) 1073, 1097
BstNI CCWGG 4 cut(s) 63, 873, 1102, 1470
BstSCI CCNGG 7 cut(s) 61, 141, 169, 871, 1100, 1468, 1490
BstSFI CTRYAG 5 cut(s) 18, 438, 1065, 1143, 1221
BstSLI GKGCMC 1 cut(s) 710
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 6 cut(s) 144, 840, 1079, 1174, 1177, 1225
BstV2I GAAGAC 2 cut(s) 153, 1485
BstX2I RGATCY 2 cut(s) 534, 754
BstYI RGATCY 2 cut(s) 534, 754
Bsu15I ATCGAT 1 cut(s) 612
BsuRI GGCC 5 cut(s) 41, 56, 315, 497, 1490
BsuTUI ATCGAT 1 cut(s) 612
BtgI CCRYGG 2 cut(s) 316, 882
BtrI CACGTC 1 cut(s) 809
BtsCI GGATG 3 cut(s) 113, 976, 1012
BtsI GCAGTG 1 cut(s) 1230
BtsIMutI CAGTG 6 cut(s) 382, 409, 545, 939, 960, 1230
Cac8I GCNNGC 1 cut(s) 54
CaiI CAGNNNCTG 5 cut(s) 547, 938, 1052, 1190, 1298
CciI TCATGA 1 cut(s) 823
CfoI GCGC 2 cut(s) 157, 1078
Cfr10I RCCGGY 2 cut(s) 41, 52
Cfr13I GGNCC 4 cut(s) 320, 495, 1285, 1489
ClaI ATCGAT 1 cut(s) 612
CseI GACGC 2 cut(s) 462, 944
CviAII CATG 5 cut(s) 253, 317, 824, 883, 1483
DdeI CTNAG 7 cut(s) 342, 531, 931, 963, 985, 1165, 1291
DpnI GATC 5 cut(s) 135, 425, 536, 756, 929
DpnII GATC 5 cut(s) 133, 423, 534, 754, 927
EaeI YGGCCR 2 cut(s) 39, 313
Eam1104I CTCTTC 5 cut(s) 86, 825, 1308, 1341, 1347
EarI CTCTTC 5 cut(s) 86, 825, 1308, 1341, 1347
Ecl136II GAGCTC 2 cut(s) 96, 378
Eco130I CCWWGG 3 cut(s) 316, 882, 1457
Eco24I GRGCYC 3 cut(s) 35, 98, 380
Eco31I GGTCTC 1 cut(s) 881
Eco47I GGWCC 2 cut(s) 320, 1285
Eco47III AGCGCT 1 cut(s) 1077
Eco53kI GAGCTC 2 cut(s) 96, 378
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 2 cut(s) 96, 378
EcoO109I RGGNCCY 1 cut(s) 495
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 4 cut(s) 61, 871, 1100, 1468
EcoT14I CCWWGG 3 cut(s) 316, 882, 1457
EcoT38I GRGCYC 3 cut(s) 35, 98, 380
ErhI CCWWGG 3 cut(s) 316, 882, 1457
Esp3I CGTCTC 1 cut(s) 962
FaeI CATG 5 cut(s) 256, 320, 827, 886, 1486
FaqI GGGAC 4 cut(s) 643, 701, 1256, 1309
FatI CATG 5 cut(s) 252, 316, 823, 882, 1482
FauI CCCGC 3 cut(s) 89, 125, 160
FauNDI CATATG 2 cut(s) 325, 333
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 2 cut(s) 1032, 1131
Fnu4HI GCNGC 7 cut(s) 75, 158, 854, 1068, 1188, 1191, 1214
FokI GGATG 3 cut(s) 100, 983, 1019
FriOI GRGCYC 3 cut(s) 35, 98, 380
Fsp4HI GCNGC 7 cut(s) 75, 158, 854, 1068, 1188, 1191, 1214
FspBI CTAG 1 cut(s) 195
GlaI GCGC 2 cut(s) 156, 1077
GluI GCNGC 7 cut(s) 75, 158, 854, 1068, 1188, 1191, 1214
GsaI CCCAGC 2 cut(s) 70, 1245
GsuI CTGGAG 2 cut(s) 676, 1123
HaeII RGCGCY 1 cut(s) 1079
HaeIII GGCC 5 cut(s) 41, 56, 315, 497, 1490
HapII CCGG 6 cut(s) 42, 53, 85, 142, 170, 1492
HgaI GACGC 2 cut(s) 462, 944
HhaI GCGC 2 cut(s) 157, 1078
Hin1I GRCGYC 1 cut(s) 955
Hin1II CATG 5 cut(s) 256, 320, 827, 886, 1486
Hin6I GCGC 2 cut(s) 155, 1076
HinP1I GCGC 2 cut(s) 155, 1076
HincII GTYRAC 2 cut(s) 1438, 1449
HindII GTYRAC 2 cut(s) 1438, 1449
HindIII AAGCTT 2 cut(s) 445, 567
HpaI GTTAAC 1 cut(s) 1438
HpaII CCGG 6 cut(s) 42, 53, 85, 142, 170, 1492
HphI GGTGA 2 cut(s) 128, 1246
Hpy166II GTNNAC 7 cut(s) 216, 394, 708, 1033, 1132, 1438, 1449
Hpy188I TCNGA 7 cut(s) 457, 520, 543, 927, 1168, 1304, 1393
Hpy188III TCNNGA 7 cut(s) 279, 562, 662, 693, 824, 1325, 1418
Hpy8I GTNNAC 7 cut(s) 216, 394, 708, 1033, 1132, 1438, 1449
HpyAV CCTTC 3 cut(s) 961, 1415, 1480
HpyCH4III ACNGT 5 cut(s) 292, 404, 751, 1139, 1300
HpyCH4IV ACGT 2 cut(s) 808, 1057
HpyCH4V TGCA 8 cut(s) 20, 113, 160, 440, 708, 1055, 1067, 1223
HpyF10VI GCNNNNNNNGC 2 cut(s) 1073, 1097
HpyF3I CTNAG 7 cut(s) 342, 531, 931, 963, 985, 1165, 1291
HpySE526I ACGT 2 cut(s) 808, 1057
Hsp92I GRCGYC 1 cut(s) 955
Hsp92II CATG 5 cut(s) 256, 320, 827, 886, 1486
HspAI GCGC 2 cut(s) 155, 1076
KroI GCCGGC 1 cut(s) 52
KroNI GCCGGC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 133
KspAI GTTAAC 1 cut(s) 1438
Kzo9I GATC 5 cut(s) 133, 423, 534, 754, 927
LguI GCTCTTC 2 cut(s) 86, 825
LmnI GCTCC 3 cut(s) 30, 71, 101
Lsp1109I GCAGC 6 cut(s) 144, 840, 1079, 1174, 1177, 1225
LweI GCATC 3 cut(s) 122, 238, 1052
MaeI CTAG 1 cut(s) 195
MaeII ACGT 2 cut(s) 808, 1057
MaeIII GTNAC 1 cut(s) 640
MalI GATC 5 cut(s) 135, 425, 536, 756, 929
MbiI CCGCTC 1 cut(s) 1290
MboI GATC 5 cut(s) 133, 423, 534, 754, 927
MfeI CAATTG 1 cut(s) 743
MflI RGATCY 2 cut(s) 534, 754
MhlI GDGCHC 4 cut(s) 35, 98, 380, 710
MlsI TGGCCA 1 cut(s) 315
MluCI AATT 8 cut(s) 121, 268, 451, 648, 738, 743, 974, 1177
MluNI TGGCCA 1 cut(s) 315
MlyI GAGTC 5 cut(s) 563, 683, 860, 1094, 1157
MmeI TCCRAC 1 cut(s) 655
Mox20I TGGCCA 1 cut(s) 315
MroNI GCCGGC 1 cut(s) 52
MroXI GAANNNNTTC 1 cut(s) 569
MscI TGGCCA 1 cut(s) 315
MseI TTAA 5 cut(s) 186, 398, 651, 1386, 1437
Msp20I TGGCCA 1 cut(s) 315
MspA1I CMGCKG 2 cut(s) 776, 1187
MspI CCGG 6 cut(s) 42, 53, 85, 142, 170, 1492
MspR9I CCNGG 7 cut(s) 63, 143, 171, 873, 1102, 1470, 1492
MunI CAATTG 1 cut(s) 743
Mva1269I GAATGC 2 cut(s) 1243, 1375
MvaI CCWGG 4 cut(s) 63, 873, 1102, 1470
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 1073, 1097
NaeI GCCGGC 1 cut(s) 54
NciI CCSGG 3 cut(s) 143, 171, 1492
NcoI CCATGG 2 cut(s) 316, 882
NdeI CATATG 2 cut(s) 325, 333
NdeII GATC 5 cut(s) 133, 423, 534, 754, 927
NgoMIV GCCGGC 1 cut(s) 52
NlaIII CATG 5 cut(s) 256, 320, 827, 886, 1486
NlaIV GGNNCC 4 cut(s) 7, 32, 73, 238
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 1 cut(s) 823
PciSI GCTCTTC 2 cut(s) 86, 825
PctI GAATGC 2 cut(s) 1243, 1375
PdiI GCCGGC 1 cut(s) 54
PdmI GAANNNNTTC 1 cut(s) 569
PfeI GAWTC 5 cut(s) 166, 356, 506, 515, 1394
PkrI GCNGC 7 cut(s) 76, 159, 855, 1069, 1189, 1192, 1215
PleI GAGTC 5 cut(s) 562, 683, 860, 1093, 1157
PpsI GAGTC 5 cut(s) 562, 683, 860, 1093, 1157
Psp124BI GAGCTC 2 cut(s) 98, 380
Psp6I CCWGG 4 cut(s) 61, 871, 1100, 1468
PspFI CCCAGC 2 cut(s) 66, 1241
PspGI CCWGG 4 cut(s) 61, 871, 1100, 1468
PspN4I GGNNCC 4 cut(s) 7, 32, 73, 238
PspPI GGNCC 4 cut(s) 320, 495, 1285, 1489
PspXI VCTCGAGB 1 cut(s) 1071
PsrI GAACNNNNNNTAC 2 cut(s) 582, 614
PstI CTGCAG 4 cut(s) 22, 442, 1069, 1225
PstNI CAGNNNCTG 5 cut(s) 547, 938, 1052, 1190, 1298
PsuI RGATCY 2 cut(s) 534, 754
PvuII CAGCTG 1 cut(s) 1187
SacI GAGCTC 2 cut(s) 98, 380
SapI GCTCTTC 2 cut(s) 86, 825
SaqAI TTAA 5 cut(s) 186, 398, 651, 1386, 1437
SatI GCNGC 7 cut(s) 75, 158, 854, 1068, 1188, 1191, 1214
Sau3AI GATC 5 cut(s) 133, 423, 534, 754, 927
Sau96I GGNCC 4 cut(s) 320, 495, 1285, 1489
SchI GAGTC 5 cut(s) 563, 683, 860, 1094, 1157
ScrFI CCNGG 7 cut(s) 63, 143, 171, 873, 1102, 1470, 1492
SduI GDGCHC 4 cut(s) 35, 98, 380, 710
SfaNI GCATC 3 cut(s) 122, 238, 1052
SfcI CTRYAG 5 cut(s) 18, 438, 1065, 1143, 1221
Sfr274I CTCGAG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 320, 1285
SlaI CTCGAG 1 cut(s) 1071
SmlI CTYRAG 4 cut(s) 368, 911, 1071, 1204
SmoI CTYRAG 4 cut(s) 368, 911, 1071, 1204
Sse9I AATT 8 cut(s) 121, 268, 451, 648, 738, 743, 974, 1177
SsiI CCGC 8 cut(s) 75, 82, 118, 139, 153, 465, 776, 1288
SspMI CTAG 1 cut(s) 195
SstI GAGCTC 2 cut(s) 98, 380
StyD4I CCNGG 7 cut(s) 61, 141, 169, 871, 1100, 1468, 1490
StyI CCWWGG 3 cut(s) 316, 882, 1457
TaaI ACNGT 5 cut(s) 292, 404, 751, 1139, 1300
TaiI ACGT 2 cut(s) 811, 1060
TaqI TCGA 4 cut(s) 612, 1072, 1096, 1161
TasI AATT 8 cut(s) 121, 268, 451, 648, 738, 743, 974, 1177
TauI GCSGC 1 cut(s) 77
TfiI GAWTC 5 cut(s) 166, 356, 506, 515, 1394
Tru1I TTAA 5 cut(s) 186, 398, 651, 1386, 1437
Tru9I TTAA 5 cut(s) 186, 398, 651, 1386, 1437
TscAI CASTG 6 cut(s) 389, 409, 552, 939, 967, 1230
TseI GCWGC 6 cut(s) 157, 853, 1067, 1187, 1190, 1213
TspDTI ATGAA 9 cut(s) 117, 498, 812, 843, 987, 1269, 1353, 1359, 1499
TspGWI ACGGA 1 cut(s) 808
TspRI CASTG 6 cut(s) 389, 409, 552, 939, 967, 1230
VneI GTGCAC 1 cut(s) 706
VpaK11BI GGWCC 2 cut(s) 320, 1285
XapI RAATTY 3 cut(s) 268, 451, 974
XcmI CCANNNNNNNNNTGG 1 cut(s) 323
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 2 cut(s) 1032, 1131
XmnI GAANNNNTTC 1 cut(s) 569
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.