Rorug05G0028000

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000163
Physical Location & Seq
Reverse (-)
1800433 .. 1804292
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0028000.1

Sequence Viewer

Length: 1221 bp
ATGATGCAACCCGGCTCCGGTCTGGCTCCGTCGCAAATGGGCCAGCAGCCGGCCCAGCAGTACGGCCAGCAGCCGCCCGCCGCCCAGCCCTACATGATGATGCCGCCTCCGCCTCCCGCCGTCCAGGCCCCGCCGATGTGGGCCCCGCAGTCGCACGTGGCCCCGCCGCAGCCGCAGCCGGCCCAGCCCACCAGCGCCGACGAGGTCCGCACGCTCTGGATCGGCGACTTGCAGTACTGGATGGAAGAGACCTATCTTTTCAGTATCTTCGCCAACACCGGCGAGGTTGTTAGTGTGAAAGTCATCCGGAATAAGCAAACTACTCAATCGGAGGGCTATGGGTTTATTGAGTTTGTTAATCGAGCTGCTGCAGAAAGAGTGCTTCAGACGTACAATGGTACCCCTATGCCAAATGGTGGCCAGCCTTTCAGATTGAACTGGGCATCTGCAGGGGAGAAGCGTTCTGATGATACGCCTGATTATACAATATTTGTGGGCGACTTGGCTGTGGATGTGACAGATTATATGCTACAAGAGATATTTAAGGCTCGCTATCCATCATGCAAGGGAGCCAAGGTTGTTATTGACAGACTTACCGGGCGCACCAAGGGATATGGGTTTGTTAAGTTTGGAGATGAGAGTGAACAGTTGCGTGCAATGACCGAGATGAATGGAGTTGTTTGCTCTTCACGGCCCATGCGAATTGGGCCAGCTGCAAACAAAAATGCTGGGGGCAATCAGCAATATTCAAAAGCTTCATATCAGAGTTCTCCAGGTGCAAAGAATGAGACCGATCCCAATAATACAACTATATTTGTTGGAAATCTGGATGCCAACGTTACTGATGATCATTTGAGAACAGTTTTTAGCCAGTATGGTGAGCTAGTTCATGTTAAGATACCAGCAGGCAAGCGATGTGGGTTTGTTCAGTTCGCAGACAGGAGCCGTGCTGAAGAGGCTTTGCAAGGATTAAACAATTCTCAGATTGGTGGACAAAATATCCGACTTTCTTGGGGTCGCAGTCCTTCAAACAAGCAGCAGGCTCAGGCAGATCCAAACCAATGGAATGCTGGCTATTATGGATATGCACCAACCCCCGAGGGATATGGATATGCCCAAGTATCCCAAGACCCTAACATGTACTATGGAGGGTATCCTGCTGGATATGGCAATTACCAGCAGTCACAGCAGCAACAGCAGCAGCAAGTGGGTTATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

406

Amino Acids

44.71

Weight (kDa)

6.01

Isoelectric Point (pI)

56.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 72 - 136 8.9e-13 RNA recognition motif
RRM_1 PF00076 163 - 232 4.3e-13 RNA recognition motif
RRM_5 PF13893 249 - 340 1.1e-07 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_occluded PF16842 270 - 336 3e-06 Occluded RNA-recognition motif
RRM_1 PF00076 271 - 335 1.4e-16 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 398
AccB1I GGYRCC 1 cut(s) 398
AccB7I CCANNNNNTGG 1 cut(s) 416
AccIII TCCGGA 1 cut(s) 306
AclI AACGTT 1 cut(s) 837
AclWI GGATC 3 cut(s) 227, 788, 1046
AcoI YGGCCR 2 cut(s) 64, 418
AcuI CTGAAG 2 cut(s) 368, 972
AcvI CACGTG 1 cut(s) 157
AfaI GTAC 5 cut(s) 62, 236, 392, 400, 1142
AfiI CCNNNNNNNGG 3 cut(s) 17, 49, 416
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 3 cut(s) 436, 750, 1029
AjnI CCWGG 2 cut(s) 123, 772
AluBI AGCT 4 cut(s) 365, 713, 755, 883
AluI AGCT 4 cut(s) 365, 713, 755, 883
Alw26I GTCTC 2 cut(s) 242, 782
AlwI GGATC 3 cut(s) 227, 788, 1046
Ama87I CYCGRG 1 cut(s) 1097
Aor13HI TCCGGA 1 cut(s) 306
ApaI GGGCCC 1 cut(s) 145
Asp718I GGTACC 1 cut(s) 398
AspLEI GCGC 2 cut(s) 197, 603
AsuC2I CCSGG 2 cut(s) 12, 598
AsuHPI GGTGA 1 cut(s) 890
AvaI CYCGRG 1 cut(s) 1097
AvaII GGWCC 1 cut(s) 205
BaeGI GKGCMC 1 cut(s) 145
BaeI ACNNNNGTAYC 2 cut(s) 382, 415
BalI TGGCCA 1 cut(s) 420
BanI GGYRCC 1 cut(s) 398
BanII GRGCYC 1 cut(s) 145
BbrPI CACGTG 1 cut(s) 157
BccI CCATC 2 cut(s) 235, 565
BceAI ACGGC 4 cut(s) 79, 104, 707, 930
BciT130I CCWGG 2 cut(s) 125, 774
BciVI GTATCC 2 cut(s) 1132, 1164
BclI TGATCA 1 cut(s) 847
BcnI CCSGG 2 cut(s) 12, 598
BcoDI GTCTC 2 cut(s) 242, 782
BfaI CTAG 1 cut(s) 884
BfmI CTRYAG 2 cut(s) 369, 447
BfoI RGCGCY 1 cut(s) 198
BfuI GTATCC 2 cut(s) 1132, 1164
BglI GCCNNNNNGGC 1 cut(s) 125
BmcAI AGTACT 1 cut(s) 236
Bme1390I CCNGG 4 cut(s) 12, 125, 598, 774
Bme18I GGWCC 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 1097
BmiI GGNNCC 9 cut(s) 16, 27, 129, 143, 144, 162, 400, 571, 944
BmrFI CCNGG 4 cut(s) 12, 125, 598, 774
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 3 cut(s) 90, 452, 820
BmuI ACTGGG 1 cut(s) 448
BpmI CTGGAG 1 cut(s) 756
Bpu10I CCTNAGC 1 cut(s) 1044
BpuMI CCSGG 2 cut(s) 12, 598
BsaAI YACGTR 1 cut(s) 157
BsaI GGTCTC 2 cut(s) 242, 782
BsaJI CCNNGG 3 cut(s) 573, 606, 1098
BsaWI WCCGGW 2 cut(s) 17, 306
BsaXI ACNNNNNCTCC 2 cut(s) 561, 591
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 49, 416
Bse118I RCCGGY 3 cut(s) 49, 178, 278
Bse1I ACTGG 3 cut(s) 242, 443, 871
Bse3DI GCAATG 1 cut(s) 663
BseAI TCCGGA 1 cut(s) 306
BseBI CCWGG 2 cut(s) 125, 774
BseDI CCNNGG 3 cut(s) 573, 606, 1098
BseGI GGATG 4 cut(s) 246, 303, 517, 835
BseLI CCNNNNNNNGG 3 cut(s) 17, 49, 416
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 2 cut(s) 995, 1058
BseNI ACTGG 3 cut(s) 242, 443, 871
BseSI GKGCMC 1 cut(s) 145
BseYI CCCAGC 4 cut(s) 54, 84, 183, 728
BshNI GGYRCC 1 cut(s) 398
BsiHKCI CYCGRG 1 cut(s) 1097
BsiSI CCGG 7 cut(s) 12, 18, 50, 179, 279, 307, 597
BslI CCNNNNNNNGG 3 cut(s) 17, 49, 416
BsmAI GTCTC 2 cut(s) 242, 782
BsmI GAATGC 1 cut(s) 1072
Bso31I GGTCTC 2 cut(s) 242, 782
BsoBI CYCGRG 1 cut(s) 1097
Bsp120I GGGCCC 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 145
Bsp13I TCCGGA 1 cut(s) 306
Bsp143I GATC 4 cut(s) 219, 793, 847, 1051
BspCNI CTCAG 2 cut(s) 994, 1057
BspEI TCCGGA 1 cut(s) 306
BspLI GGNNCC 9 cut(s) 16, 27, 129, 143, 144, 162, 400, 571, 944
BspMAI CTGCAG 2 cut(s) 373, 451
BspPI GGATC 3 cut(s) 227, 788, 1046
BspQI GCTCTTC 1 cut(s) 691
BspT107I GGYRCC 1 cut(s) 398
BspTNI GGTCTC 2 cut(s) 242, 782
BsrDI GCAATG 1 cut(s) 663
BsrFI RCCGGY 3 cut(s) 49, 178, 278
BsrI ACTGG 3 cut(s) 242, 443, 871
BssAI RCCGGY 3 cut(s) 49, 178, 278
BssECI CCNNGG 3 cut(s) 573, 606, 1098
BssMI GATC 4 cut(s) 219, 793, 847, 1051
BssT1I CCWWGG 2 cut(s) 573, 606
Bst2UI CCWGG 2 cut(s) 125, 774
Bst4CI ACNGT 2 cut(s) 648, 862
Bst6I CTCTTC 3 cut(s) 240, 691, 948
BstBAI YACGTR 1 cut(s) 157
BstDEI CTNAG 2 cut(s) 981, 1044
BstF5I GGATG 4 cut(s) 246, 303, 517, 835
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 2 cut(s) 197, 603
BstKTI GATC 4 cut(s) 222, 796, 850, 1054
BstMAI GTCTC 2 cut(s) 242, 782
BstMBI GATC 4 cut(s) 219, 793, 847, 1051
BstNI CCWGG 2 cut(s) 125, 774
BstNSI RCATGY 1 cut(s) 1141
BstSCI CCNGG 4 cut(s) 10, 123, 596, 772
BstSFI CTRYAG 2 cut(s) 369, 447
BstSLI GKGCMC 1 cut(s) 145
BstX2I RGATCY 1 cut(s) 1051
BstXI CCANNNNNNTGG 1 cut(s) 1062
BstYI RGATCY 1 cut(s) 1051
BsuI GTATCC 2 cut(s) 1132, 1164
BtgZI GCGATG 1 cut(s) 928
BtsCI GGATG 4 cut(s) 246, 303, 517, 835
CfoI GCGC 2 cut(s) 197, 603
Cfr10I RCCGGY 3 cut(s) 49, 178, 278
Csp6I GTAC 5 cut(s) 61, 235, 391, 399, 1141
CspCI CAANNNNNGTGG 4 cut(s) 474, 509, 898, 933
CviAII CATG 5 cut(s) 94, 561, 697, 890, 1138
CviQI GTAC 5 cut(s) 61, 235, 391, 399, 1141
DdeI CTNAG 2 cut(s) 981, 1044
DpnI GATC 4 cut(s) 221, 795, 849, 1053
DpnII GATC 4 cut(s) 219, 793, 847, 1051
EaeI YGGCCR 2 cut(s) 64, 418
Eam1104I CTCTTC 3 cut(s) 240, 691, 948
EarI CTCTTC 3 cut(s) 240, 691, 948
EciI GGCGGA 1 cut(s) 99
Eco130I CCWWGG 2 cut(s) 573, 606
Eco24I GRGCYC 1 cut(s) 145
Eco31I GGTCTC 2 cut(s) 242, 782
Eco47I GGWCC 1 cut(s) 205
Eco57I CTGAAG 2 cut(s) 368, 972
Eco72I CACGTG 1 cut(s) 157
Eco88I CYCGRG 1 cut(s) 1097
EcoO109I RGGNCCY 2 cut(s) 127, 142
EcoRII CCWGG 2 cut(s) 123, 772
EcoT14I CCWWGG 2 cut(s) 573, 606
EcoT38I GRGCYC 1 cut(s) 145
ErhI CCWWGG 2 cut(s) 573, 606
FaeI CATG 5 cut(s) 97, 564, 700, 893, 1141
FatI CATG 5 cut(s) 93, 560, 696, 889, 1137
FauI CCCGC 5 cut(s) 85, 124, 138, 153, 171
FbaI TGATCA 1 cut(s) 847
FokI GGATG 4 cut(s) 253, 290, 524, 842
FriOI GRGCYC 1 cut(s) 145
FspBI CTAG 1 cut(s) 884
GlaI GCGC 2 cut(s) 196, 602
GsaI CCCAGC 4 cut(s) 58, 88, 187, 732
GsuI CTGGAG 1 cut(s) 756
HaeII RGCGCY 1 cut(s) 198
HapII CCGG 7 cut(s) 12, 18, 50, 179, 279, 307, 597
HhaI GCGC 2 cut(s) 197, 603
Hin1II CATG 5 cut(s) 97, 564, 700, 893, 1141
Hin6I GCGC 2 cut(s) 195, 601
HinP1I GCGC 2 cut(s) 195, 601
HindIII AAGCTT 1 cut(s) 753
HpaII CCGG 7 cut(s) 12, 18, 50, 179, 279, 307, 597
HphI GGTGA 1 cut(s) 890
Hpy166II GTNNAC 2 cut(s) 644, 992
Hpy188I TCNGA 7 cut(s) 331, 387, 431, 466, 765, 984, 1004
Hpy188III TCNNGA 3 cut(s) 217, 307, 827
Hpy8I GTNNAC 2 cut(s) 644, 992
Hpy99I CGWCG 2 cut(s) 34, 203
HpyAV CCTTC 1 cut(s) 1035
HpyCH4III ACNGT 2 cut(s) 648, 862
HpyCH4IV ACGT 3 cut(s) 156, 389, 837
HpyF3I CTNAG 2 cut(s) 981, 1044
HpySE526I ACGT 3 cut(s) 156, 389, 837
Hsp92II CATG 5 cut(s) 97, 564, 700, 893, 1141
HspAI GCGC 2 cut(s) 195, 601
Kpn2I TCCGGA 1 cut(s) 306
KpnI GGTACC 1 cut(s) 402
KroI GCCGGC 2 cut(s) 49, 178
KroNI GCCGGC 2 cut(s) 51, 180
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 4 cut(s) 219, 793, 847, 1051
LguI GCTCTTC 1 cut(s) 691
LmnI GCTCC 4 cut(s) 20, 31, 569, 942
LweI GCATC 3 cut(s) 90, 452, 820
MaeI CTAG 1 cut(s) 884
MaeII ACGT 3 cut(s) 156, 389, 837
MaeIII GTNAC 3 cut(s) 514, 838, 1182
MalI GATC 4 cut(s) 221, 795, 849, 1053
MboI GATC 4 cut(s) 219, 793, 847, 1051
MboII GAAGA 4 cut(s) 257, 259, 678, 965
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 1 cut(s) 145
MlsI TGGCCA 1 cut(s) 420
MluCI AATT 3 cut(s) 702, 976, 1171
MluNI TGGCCA 1 cut(s) 420
MmeI TCCRAC 2 cut(s) 799, 1027
MnlI CCTC 8 cut(s) 117, 123, 196, 277, 325, 949, 1093, 1142
Mox20I TGGCCA 1 cut(s) 420
MroI TCCGGA 1 cut(s) 306
MroNI GCCGGC 2 cut(s) 49, 178
MscI TGGCCA 1 cut(s) 420
MseI TTAA 5 cut(s) 357, 543, 624, 894, 971
MslI CAYNNNNRTG 1 cut(s) 98
Msp20I TGGCCA 1 cut(s) 420
MspA1I CMGCKG 1 cut(s) 713
MspI CCGG 7 cut(s) 12, 18, 50, 179, 279, 307, 597
MspR9I CCNGG 4 cut(s) 12, 125, 598, 774
Mva1269I GAATGC 1 cut(s) 1072
MvaI CCWGG 2 cut(s) 125, 774
NaeI GCCGGC 2 cut(s) 51, 180
NciI CCSGG 2 cut(s) 12, 598
NdeII GATC 4 cut(s) 219, 793, 847, 1051
NgoMIV GCCGGC 2 cut(s) 49, 178
NlaIII CATG 5 cut(s) 97, 564, 700, 893, 1141
NlaIV GGNNCC 9 cut(s) 16, 27, 129, 143, 144, 162, 400, 571, 944
NmuCI GTSAC 2 cut(s) 514, 1182
NspI RCATGY 1 cut(s) 1141
PciI ACATGT 1 cut(s) 1137
PciSI GCTCTTC 1 cut(s) 691
PcsI WCGNNNNNNNCGW 1 cut(s) 697
PctI GAATGC 1 cut(s) 1072
PdiI GCCGGC 2 cut(s) 51, 180
PflFI GACNNNGTC 1 cut(s) 203
PflMI CCANNNNNTGG 1 cut(s) 416
PmaCI CACGTG 1 cut(s) 157
PmlI CACGTG 1 cut(s) 157
Ppu21I YACGTR 1 cut(s) 157
PscI ACATGT 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 837
Psp6I CCWGG 2 cut(s) 123, 772
PspCI CACGTG 1 cut(s) 157
PspFI CCCAGC 4 cut(s) 54, 84, 183, 728
PspGI CCWGG 2 cut(s) 123, 772
PspN4I GGNNCC 9 cut(s) 16, 27, 129, 143, 144, 162, 400, 571, 944
PspOMI GGGCCC 1 cut(s) 141
PstI CTGCAG 2 cut(s) 373, 451
PsuI RGATCY 1 cut(s) 1051
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 713
RsaI GTAC 5 cut(s) 62, 236, 392, 400, 1142
RsaNI GTAC 5 cut(s) 61, 235, 391, 399, 1141
RseI CAYNNNNRTG 1 cut(s) 98
SapI GCTCTTC 1 cut(s) 691
SaqAI TTAA 5 cut(s) 357, 543, 624, 894, 971
Sau3AI GATC 4 cut(s) 219, 793, 847, 1051
ScaI AGTACT 1 cut(s) 236
ScrFI CCNGG 4 cut(s) 12, 125, 598, 774
SduI GDGCHC 1 cut(s) 145
SfaNI GCATC 3 cut(s) 90, 452, 820
SfcI CTRYAG 2 cut(s) 369, 447
SgrAI CRCCGGYG 1 cut(s) 278
SinI GGWCC 1 cut(s) 205
SmiMI CAYNNNNRTG 1 cut(s) 98
Sse9I AATT 3 cut(s) 702, 976, 1171
SspI AATATT 2 cut(s) 489, 746
SspMI CTAG 1 cut(s) 884
StyD4I CCNGG 4 cut(s) 10, 123, 596, 772
StyI CCWWGG 2 cut(s) 573, 606
TaaI ACNGT 2 cut(s) 648, 862
TaiI ACGT 3 cut(s) 159, 392, 840
TaqI TCGA 1 cut(s) 361
TaqII GACCGA 2 cut(s) 677, 806
TasI AATT 3 cut(s) 702, 976, 1171
TatI WGTACW 2 cut(s) 234, 1140
TauI GCSGC 5 cut(s) 76, 83, 106, 169, 175
Tru1I TTAA 5 cut(s) 357, 543, 624, 894, 971
Tru9I TTAA 5 cut(s) 357, 543, 624, 894, 971
TseFI GTSAC 2 cut(s) 514, 1182
Tsp45I GTSAC 2 cut(s) 514, 1182
TspDTI ATGAA 3 cut(s) 683, 747, 878
TspGWI ACGGA 1 cut(s) 18
Tth111I GACNNNGTC 1 cut(s) 203
Van91I CCANNNNNTGG 1 cut(s) 416
VpaK11BI GGWCC 1 cut(s) 205
XceI RCATGY 1 cut(s) 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 1067
XspI CTAG 1 cut(s) 884
ZrmI AGTACT 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.