Belongs to the serpin family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NDUS4 | PF04800 | 52 - 146 | 1.4e-31 | NADH dehydrogenase ubiquinone Fe-S protein 4 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 114 |
| AclWI | GGATC | 3 cut(s) | 97, 110, 278 |
| AcsI | RAATTY | 1 cut(s) | 344 |
| AcyI | GRCGYC | 1 cut(s) | 111 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 113, 263 |
| AgsI | TTSAA | 1 cut(s) | 430 |
| AjnI | CCWGG | 2 cut(s) | 87, 98 |
| AluBI | AGCT | 2 cut(s) | 9, 335 |
| AluI | AGCT | 2 cut(s) | 9, 335 |
| Alw26I | GTCTC | 1 cut(s) | 89 |
| AlwI | GGATC | 3 cut(s) | 97, 110, 278 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 88 |
| AoxI | GGCC | 1 cut(s) | 84 |
| ApeKI | GCWGC | 1 cut(s) | 335 |
| ApoI | RAATTY | 1 cut(s) | 344 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 141, 173 |
| AseI | ATTAAT | 1 cut(s) | 225 |
| AspS9I | GGNCC | 2 cut(s) | 57, 85 |
| AsuC2I | CCSGG | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 4 cut(s) | 19, 33, 293, 314 |
| AsuII | TTCGAA | 1 cut(s) | 321 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BamHI | GGATCC | 1 cut(s) | 102 |
| BbvI | GCAGC | 1 cut(s) | 322 |
| BccI | CCATC | 2 cut(s) | 57, 256 |
| BciT130I | CCWGG | 2 cut(s) | 89, 100 |
| BcnI | CCSGG | 1 cut(s) | 55 |
| BcoDI | GTCTC | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 336 |
| BlsI | GCNGC | 1 cut(s) | 337 |
| Bme1390I | CCNGG | 3 cut(s) | 55, 89, 100 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 2 cut(s) | 57, 85 |
| BmiI | GGNNCC | 1 cut(s) | 104 |
| BmrFI | CCNGG | 3 cut(s) | 55, 89, 100 |
| BmsI | GCATC | 2 cut(s) | 151, 194 |
| Bpu14I | TTCGAA | 1 cut(s) | 321 |
| BpuMI | CCSGG | 1 cut(s) | 55 |
| BsaHI | GRCGYC | 1 cut(s) | 111 |
| BsaI | GGTCTC | 1 cut(s) | 89 |
| BsaJI | CCNNGG | 1 cut(s) | 87 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 113, 263 |
| BseBI | CCWGG | 2 cut(s) | 89, 100 |
| BseDI | CCNNGG | 1 cut(s) | 87 |
| BseGI | GGATG | 1 cut(s) | 272 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 113, 263 |
| BseMII | CTCAG | 2 cut(s) | 95, 342 |
| BseXI | GCAGC | 1 cut(s) | 322 |
| BshFI | GGCC | 1 cut(s) | 86 |
| BsiSI | CCGG | 1 cut(s) | 55 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 113, 263 |
| BsmAI | GTCTC | 1 cut(s) | 89 |
| BsnI | GGCC | 1 cut(s) | 86 |
| Bso31I | GGTCTC | 1 cut(s) | 89 |
| Bsp119I | TTCGAA | 1 cut(s) | 321 |
| Bsp143I | GATC | 3 cut(s) | 38, 102, 283 |
| BspANI | GGCC | 1 cut(s) | 86 |
| BspCNI | CTCAG | 2 cut(s) | 94, 343 |
| BspLI | GGNNCC | 1 cut(s) | 104 |
| BspPI | GGATC | 3 cut(s) | 97, 110, 278 |
| BspT104I | TTCGAA | 1 cut(s) | 321 |
| BspTNI | GGTCTC | 1 cut(s) | 89 |
| BssECI | CCNNGG | 1 cut(s) | 87 |
| BssMI | GATC | 3 cut(s) | 38, 102, 283 |
| BssNI | GRCGYC | 1 cut(s) | 111 |
| Bst2UI | CCWGG | 2 cut(s) | 89, 100 |
| Bst4CI | ACNGT | 1 cut(s) | 376 |
| BstACI | GRCGYC | 1 cut(s) | 111 |
| BstBI | TTCGAA | 1 cut(s) | 321 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstDEI | CTNAG | 3 cut(s) | 81, 351, 401 |
| BstF5I | GGATG | 1 cut(s) | 272 |
| BstKTI | GATC | 3 cut(s) | 41, 105, 286 |
| BstMAI | GTCTC | 1 cut(s) | 89 |
| BstMBI | GATC | 3 cut(s) | 38, 102, 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 182 |
| BstNI | CCWGG | 2 cut(s) | 89, 100 |
| BstSCI | CCNGG | 3 cut(s) | 53, 87, 98 |
| BstV1I | GCAGC | 1 cut(s) | 322 |
| BstX2I | RGATCY | 1 cut(s) | 102 |
| BstYI | RGATCY | 1 cut(s) | 102 |
| BsuRI | GGCC | 1 cut(s) | 86 |
| BtsCI | GGATG | 1 cut(s) | 272 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| CaiI | CAGNNNCTG | 1 cut(s) | 88 |
| Cfr13I | GGNCC | 2 cut(s) | 57, 85 |
| CseI | GACGC | 1 cut(s) | 374 |
| CviAII | CATG | 1 cut(s) | 359 |
| CviJI | RGCY | 5 cut(s) | 9, 35, 86, 335, 442 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 35, 86, 335, 442 |
| DdeI | CTNAG | 3 cut(s) | 81, 351, 401 |
| DpnI | GATC | 3 cut(s) | 40, 104, 285 |
| DpnII | GATC | 3 cut(s) | 38, 102, 283 |
| Eco31I | GGTCTC | 1 cut(s) | 89 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| EcoO109I | RGGNCCY | 1 cut(s) | 85 |
| EcoRII | CCWGG | 2 cut(s) | 87, 98 |
| FaeI | CATG | 1 cut(s) | 362 |
| FaiI | YATR | 5 cut(s) | 122, 291, 360, 372, 417 |
| FatI | CATG | 1 cut(s) | 358 |
| Fnu4HI | GCNGC | 1 cut(s) | 336 |
| FokI | GGATG | 1 cut(s) | 259 |
| Fsp4HI | GCNGC | 1 cut(s) | 336 |
| GluI | GCNGC | 1 cut(s) | 336 |
| HaeIII | GGCC | 1 cut(s) | 86 |
| HapII | CCGG | 1 cut(s) | 55 |
| HgaI | GACGC | 1 cut(s) | 374 |
| Hin1I | GRCGYC | 1 cut(s) | 111 |
| Hin1II | CATG | 1 cut(s) | 362 |
| HinfI | GANTC | 4 cut(s) | 24, 77, 117, 129 |
| HpaII | CCGG | 1 cut(s) | 55 |
| HphI | GGTGA | 4 cut(s) | 19, 33, 293, 314 |
| Hpy188I | TCNGA | 2 cut(s) | 76, 116 |
| Hpy188III | TCNNGA | 3 cut(s) | 126, 379, 409 |
| Hpy99I | CGWCG | 3 cut(s) | 76, 113, 116 |
| HpyAV | CCTTC | 2 cut(s) | 147, 430 |
| HpyCH4III | ACNGT | 1 cut(s) | 376 |
| HpyCH4IV | ACGT | 1 cut(s) | 111 |
| HpyCH4V | TGCA | 3 cut(s) | 185, 338, 419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 182 |
| HpyF3I | CTNAG | 3 cut(s) | 81, 351, 401 |
| HpySE526I | ACGT | 1 cut(s) | 111 |
| Hsp92I | GRCGYC | 1 cut(s) | 111 |
| Hsp92II | CATG | 1 cut(s) | 362 |
| Kzo9I | GATC | 3 cut(s) | 38, 102, 283 |
| Lsp1109I | GCAGC | 1 cut(s) | 322 |
| LweI | GCATC | 2 cut(s) | 151, 194 |
| MaeII | ACGT | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 386 |
| MalI | GATC | 3 cut(s) | 40, 104, 285 |
| MboI | GATC | 3 cut(s) | 38, 102, 283 |
| MboII | GAAGA | 1 cut(s) | 341 |
| MflI | RGATCY | 1 cut(s) | 102 |
| MluCI | AATT | 4 cut(s) | 162, 222, 226, 344 |
| MmeI | TCCRAC | 3 cut(s) | 54, 94, 248 |
| MnlI | CCTC | 3 cut(s) | 298, 448, 451 |
| MseI | TTAA | 1 cut(s) | 225 |
| MspI | CCGG | 1 cut(s) | 55 |
| MspR9I | CCNGG | 3 cut(s) | 55, 89, 100 |
| MvaI | CCWGG | 2 cut(s) | 89, 100 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 182 |
| NciI | CCSGG | 1 cut(s) | 55 |
| NdeII | GATC | 3 cut(s) | 38, 102, 283 |
| NlaIII | CATG | 1 cut(s) | 362 |
| NlaIV | GGNNCC | 1 cut(s) | 104 |
| NmuCI | GTSAC | 1 cut(s) | 386 |
| NspV | TTCGAA | 1 cut(s) | 321 |
| PfeI | GAWTC | 4 cut(s) | 24, 77, 117, 129 |
| PfoI | TCCNGGA | 1 cut(s) | 53 |
| PkrI | GCNGC | 1 cut(s) | 337 |
| PshBI | ATTAAT | 1 cut(s) | 225 |
| Psp6I | CCWGG | 2 cut(s) | 87, 98 |
| PspGI | CCWGG | 2 cut(s) | 87, 98 |
| PspN4I | GGNNCC | 1 cut(s) | 104 |
| PspPI | GGNCC | 2 cut(s) | 57, 85 |
| PstNI | CAGNNNCTG | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 102 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| SatI | GCNGC | 1 cut(s) | 336 |
| Sau3AI | GATC | 3 cut(s) | 38, 102, 283 |
| Sau96I | GGNCC | 2 cut(s) | 57, 85 |
| ScrFI | CCNGG | 3 cut(s) | 55, 89, 100 |
| SetI | ASST | 6 cut(s) | 11, 46, 114, 199, 283, 337 |
| SfaNI | GCATC | 2 cut(s) | 151, 194 |
| SfuI | TTCGAA | 1 cut(s) | 321 |
| SinI | GGWCC | 1 cut(s) | 57 |
| Sse9I | AATT | 4 cut(s) | 162, 222, 226, 344 |
| StyD4I | CCNGG | 3 cut(s) | 53, 87, 98 |
| TaaI | ACNGT | 1 cut(s) | 376 |
| TaiI | ACGT | 1 cut(s) | 114 |
| TaqI | TCGA | 2 cut(s) | 178, 321 |
| TasI | AATT | 4 cut(s) | 162, 222, 226, 344 |
| TfiI | GAWTC | 4 cut(s) | 24, 77, 117, 129 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TseFI | GTSAC | 1 cut(s) | 386 |
| TseI | GCWGC | 1 cut(s) | 335 |
| Tsp45I | GTSAC | 1 cut(s) | 386 |
| TspGWI | ACGGA | 1 cut(s) | 36 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| VspI | ATTAAT | 1 cut(s) | 225 |
| XapI | RAATTY | 1 cut(s) | 344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 264 |
| ZraI | GACGTC | 1 cut(s) | 112 |