RLG00000032205

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000163
Physical Location & Seq
Reverse (-)
12056646 .. 12058992
2347 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032205

Sequence Viewer

Length: 1266 bp
ATGAGGAACACCACCAGCACCAGATCATCAGCGAACTCGTGCAGAAGAAGACCCGAACCAAAGGACACATATCACGATCTTAACCAAAGGATACAGATCAACAACATAACAATCCACCTGCCACCTACCACTGCCTGGACGTCCCTCATATTGCCGCTGCCATCGTTGCCACACCACCGTCAATCTCCATGCTTTAGCATAGCAATGAACCTGAATCCAGCTCTGCTGCCGTCAAACTCCAAGCGAAAAACCAAACCCGAAAGGCCACAACAACAAACATACGTGGGACTGGAGATCACGAAGCAACTCCTTGAAACTGAGTTCAAGAACACAAACATGGTGTACTCGCCGCTATCCATCCACATCGTGCTGAGCATAGTAGCCGCTGGGAAAACTGGTTCCGATCTGTCCAAGTCCGTCGACGACTCCCTCGCCTACCATCTCATCACTTCCGTTCTAGCCGATGGATCGGCCAAAGGCGGGCCATGTTTGAACTTGGCCAACGGTTTATGGACCGAAGAGTCTAAACCTCTTGAGGATTCTTACAAAGATGTGGTGTGCGAGTCTTACAAGGCTTCCCTAAAGCAAGTCGATTTCAAGGCCAAGCCCGGTAAAGTGAGAGTTGAAGTTAATTCATGGGTGAAGAAGGAGACAAAAGGCCTTATCACTGAGATTCTTCCTCTAAACTCAGTCACCAACGAAACAAGACGCATCTTTGCAAATGCTTTATACTTCAATGCCTCTTGGAGAGAGAGCTACCGCTTCCATGAACCCTACACAAAAGAGAAGGATCATGAGTTCCACCTTCTCAATGGGGACCCGGTCAAGGGAGTACCTTTTATGACGAGCAATGAAAGACATGGGCTGCCAGCTCTAGCTGAGAGAGTTTGTTCAGAATCCGGTTTTATAAATGGTCATCTGAAGAGTAAAAACCTAGACTGGGTTGAAGTGGGTGAATTCTTGATTCCAATGTTTAAGTTTTCTTCGGCGTTTGAAGCCTCTGGTATTCTGGAGAAACTAGGACTGGTGTTAAACCCTCCGCGGGCAATATTTCATGAATCCTTGATTGAAGTTGATGAACAGAGAACAACAGCTGCAGCTGCTACTGTTTATGTAGATGACTGTGACTGTAAATGTAGTGATGATGATTATGAGCCTCAAAAAGAAGACTTTGTGGAGGATCACCCACTCATGGTTGTCATCAGGGAAGACATGGCTGGAACACTGCTGTTTATGGGACATGTGCTTAATCCCCTTGCAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

422

Amino Acids

47.18

Weight (kDa)

6.18

Isoelectric Point (pI)

37.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 92 - 287 6.2e-33 Serpin (serine protease inhibitor)
Serpin PF00079 350 - 418 6.2e-11 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 908
AarI CACCTGC 1 cut(s) 126
AasI GACNNNNNNGTC 1 cut(s) 520
AatII GACGTC 1 cut(s) 143
Acc36I ACCTGC 1 cut(s) 126
AccB7I CCANNNNNTGG 1 cut(s) 135
AccI GTMKAC 1 cut(s) 420
AccII CGCG 1 cut(s) 1042
AciI CCGC 7 cut(s) 155, 350, 384, 480, 760, 1040, 1042
AclWI GGATC 3 cut(s) 475, 798, 1188
AcoI YGGCCR 2 cut(s) 471, 498
AcsI RAATTY 1 cut(s) 956
AcuI CTGAAG 1 cut(s) 941
AcyI GRCGYC 1 cut(s) 140
AdeI CACNNNGTG 1 cut(s) 367
AfaI GTAC 2 cut(s) 344, 834
AfiI CCNNNNNNNGG 8 cut(s) 135, 480, 826, 827, 940, 1042, 1192, 1259
AflIII ACRYGT 1 cut(s) 1240
AgsI TTSAA 9 cut(s) 314, 325, 493, 598, 626, 736, 947, 995, 1070
AjnI CCWGG 1 cut(s) 134
AloI GAACNNNNNNTCC 4 cut(s) 382, 414, 782, 814
AluBI AGCT 6 cut(s) 221, 756, 872, 878, 1094, 1100
AluI AGCT 6 cut(s) 221, 756, 872, 878, 1094, 1100
Alw26I GTCTC 1 cut(s) 644
AlwI GGATC 3 cut(s) 475, 798, 1188
AoxI GGCC 6 cut(s) 263, 471, 482, 498, 600, 658
ApeKI GCWGC 6 cut(s) 157, 226, 865, 1094, 1097, 1100
ApoI RAATTY 1 cut(s) 956
AspS9I GGNCC 3 cut(s) 482, 513, 817
AsuC2I CCSGG 2 cut(s) 609, 821
AsuHPI GGTGA 4 cut(s) 652, 685, 965, 1175
AvaII GGWCC 2 cut(s) 513, 817
BalI TGGCCA 1 cut(s) 500
BauI CACGAG 1 cut(s) 37
BbsI GAAGAC 3 cut(s) 55, 1173, 1215
BbvI GCAGC 6 cut(s) 144, 213, 852, 1081, 1087, 1109
BccI CCATC 4 cut(s) 169, 365, 447, 458
BceAI ACGGC 1 cut(s) 214
BciT130I CCWGG 1 cut(s) 136
BciVI GTATCC 1 cut(s) 84
BcnI CCSGG 2 cut(s) 609, 821
BcoDI GTCTC 1 cut(s) 644
BfaI CTAG 4 cut(s) 458, 875, 935, 1019
BfmI CTRYAG 1 cut(s) 1095
BfuAI ACCTGC 1 cut(s) 126
BfuI GTATCC 1 cut(s) 84
BisI GCNGC 9 cut(s) 155, 158, 227, 350, 384, 866, 1095, 1098, 1101
BlpI GCTNAGC 1 cut(s) 371
BlsI GCNGC 9 cut(s) 156, 159, 228, 351, 385, 867, 1096, 1099, 1102
Bme1390I CCNGG 3 cut(s) 136, 609, 821
Bme18I GGWCC 2 cut(s) 513, 817
BmgT120I GGNCC 3 cut(s) 482, 513, 817
BmiI GGNNCC 3 cut(s) 400, 818, 819
BmrFI CCNGG 3 cut(s) 136, 609, 821
BmrI ACTGGG 1 cut(s) 949
BmsI GCATC 1 cut(s) 720
BmuI ACTGGG 1 cut(s) 949
BpiI GAAGAC 3 cut(s) 55, 1173, 1215
BpmI CTGGAG 2 cut(s) 311, 1031
Bpu1102I GCTNAGC 1 cut(s) 371
BpuEI CTTGAG 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 609, 821
BsaAI YACGTR 1 cut(s) 283
BsaBI GATNNNNATC 1 cut(s) 95
BsaHI GRCGYC 1 cut(s) 140
BsaJI CCNNGG 1 cut(s) 1040
BsaWI WCCGGW 1 cut(s) 899
Bsc4I CCNNNNNNNGG 8 cut(s) 135, 480, 826, 827, 940, 1042, 1192, 1259
Bse1I ACTGG 4 cut(s) 294, 400, 944, 1029
Bse3DI GCAATG 2 cut(s) 210, 856
Bse8I GATNNNNATC 1 cut(s) 95
BseBI CCWGG 1 cut(s) 136
BseDI CCNNGG 1 cut(s) 1040
BseGI GGATG 1 cut(s) 357
BseJI GATNNNNATC 1 cut(s) 95
BseLI CCNNNNNNNGG 8 cut(s) 135, 480, 826, 827, 940, 1042, 1192, 1259
BseMI GCAATG 2 cut(s) 210, 856
BseMII CTCAG 5 cut(s) 309, 362, 660, 702, 870
BseNI ACTGG 4 cut(s) 294, 400, 944, 1029
BseXI GCAGC 6 cut(s) 144, 213, 852, 1081, 1087, 1109
BseYI CCCAGC 1 cut(s) 386
BsgI GTGCAG 1 cut(s) 61
Bsh1236I CGCG 1 cut(s) 1042
BshFI GGCC 6 cut(s) 265, 473, 484, 500, 602, 660
BsiSI CCGG 3 cut(s) 609, 821, 900
BslFI GGGAC 4 cut(s) 127, 300, 830, 1251
BslI CCNNNNNNNGG 8 cut(s) 135, 480, 826, 827, 940, 1042, 1192, 1259
BsmAI GTCTC 1 cut(s) 644
BsmFI GGGAC 4 cut(s) 127, 300, 830, 1251
BsnI GGCC 6 cut(s) 265, 473, 484, 500, 602, 660
Bsp143I GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
Bsp1720I GCTNAGC 1 cut(s) 371
BspACI CCGC 7 cut(s) 155, 350, 384, 480, 760, 1040, 1042
BspANI GGCC 6 cut(s) 265, 473, 484, 500, 602, 660
BspCNI CTCAG 5 cut(s) 310, 363, 661, 701, 871
BspFNI CGCG 1 cut(s) 1042
BspHI TCATGA 2 cut(s) 793, 1054
BspLI GGNNCC 3 cut(s) 400, 818, 819
BspMAI CTGCAG 1 cut(s) 1099
BspMI ACCTGC 1 cut(s) 126
BspPI GGATC 3 cut(s) 475, 798, 1188
BsrDI GCAATG 2 cut(s) 210, 856
BsrI ACTGG 4 cut(s) 294, 400, 944, 1029
BssECI CCNNGG 1 cut(s) 1040
BssMI GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
BssNI GRCGYC 1 cut(s) 140
BssSI CACGAG 1 cut(s) 37
Bst2BI CACGAG 1 cut(s) 37
Bst2UI CCWGG 1 cut(s) 136
Bst4CI ACNGT 5 cut(s) 179, 506, 1108, 1124, 1130
Bst6I CTCTTC 2 cut(s) 513, 917
BstACI GRCGYC 1 cut(s) 140
BstBAI YACGTR 1 cut(s) 283
BstC8I GCNNGC 4 cut(s) 482, 870, 1044, 1261
BstDEI CTNAG 5 cut(s) 318, 371, 669, 688, 879
BstDSI CCRYGG 1 cut(s) 1040
BstF5I GGATG 1 cut(s) 357
BstFNI CGCG 1 cut(s) 1042
BstKTI GATC 8 cut(s) 26, 79, 99, 297, 406, 470, 793, 1183
BstMAI GTCTC 1 cut(s) 644
BstMBI GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
BstMWI GCNNNNNNNGC 3 cut(s) 166, 995, 1100
BstNI CCWGG 1 cut(s) 136
BstNSI RCATGY 1 cut(s) 1244
BstSCI CCNGG 3 cut(s) 134, 607, 819
BstSFI CTRYAG 1 cut(s) 1095
BstUI CGCG 1 cut(s) 1042
BstV1I GCAGC 6 cut(s) 144, 213, 852, 1081, 1087, 1109
BstV2I GAAGAC 3 cut(s) 55, 1173, 1215
BsuI GTATCC 1 cut(s) 84
BsuRI GGCC 6 cut(s) 265, 473, 484, 500, 602, 660
BtgI CCRYGG 1 cut(s) 1040
BtsCI GGATG 1 cut(s) 357
BtsI GCAGTG 2 cut(s) 129, 1223
BtsIMutI CAGTG 3 cut(s) 129, 666, 1223
BveI ACCTGC 1 cut(s) 126
Cac8I GCNNGC 4 cut(s) 482, 870, 1044, 1261
CciI TCATGA 2 cut(s) 793, 1054
Cfr13I GGNCC 3 cut(s) 482, 513, 817
Cfr42I CCGCGG 1 cut(s) 1043
CseI GACGC 1 cut(s) 717
Csp6I GTAC 2 cut(s) 343, 833
CviQI GTAC 2 cut(s) 343, 833
DdeI CTNAG 5 cut(s) 318, 371, 669, 688, 879
DpnI GATC 8 cut(s) 25, 78, 98, 296, 405, 469, 792, 1182
DpnII GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
DraIII CACNNNGTG 1 cut(s) 367
DrdI GACNNNNNNGTC 1 cut(s) 520
DseDI GACNNNNNNGTC 1 cut(s) 520
EaeI YGGCCR 2 cut(s) 471, 498
Eam1104I CTCTTC 2 cut(s) 513, 917
EarI CTCTTC 2 cut(s) 513, 917
Eco147I AGGCCT 1 cut(s) 660
Eco47I GGWCC 2 cut(s) 513, 817
Eco57I CTGAAG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 817
EcoRI GAATTC 1 cut(s) 956
EcoRII CCWGG 1 cut(s) 134
FaqI GGGAC 4 cut(s) 127, 300, 830, 1251
FauI CCCGC 2 cut(s) 473, 1035
FblI GTMKAC 1 cut(s) 420
Fnu4HI GCNGC 9 cut(s) 155, 158, 227, 350, 384, 866, 1095, 1098, 1101
FokI GGATG 1 cut(s) 344
Fsp4HI GCNGC 9 cut(s) 155, 158, 227, 350, 384, 866, 1095, 1098, 1101
FspBI CTAG 4 cut(s) 458, 875, 935, 1019
GluI GCNGC 9 cut(s) 155, 158, 227, 350, 384, 866, 1095, 1098, 1101
GsaI CCCAGC 1 cut(s) 390
GsuI CTGGAG 2 cut(s) 311, 1031
HaeIII GGCC 6 cut(s) 265, 473, 484, 500, 602, 660
HapII CCGG 3 cut(s) 609, 821, 900
HgaI GACGC 1 cut(s) 717
Hin1I GRCGYC 1 cut(s) 140
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HinfI GANTC 9 cut(s) 214, 425, 521, 539, 563, 673, 896, 964, 1058
HpaII CCGG 3 cut(s) 609, 821, 900
HphI GGTGA 4 cut(s) 652, 685, 965, 1175
Hpy166II GTNNAC 2 cut(s) 343, 421
Hpy188I TCNGA 3 cut(s) 403, 895, 921
Hpy188III TCNNGA 8 cut(s) 74, 298, 325, 533, 794, 961, 1010, 1055
Hpy8I GTNNAC 2 cut(s) 343, 421
Hpy99I CGWCG 2 cut(s) 422, 425
HpyAV CCTTC 3 cut(s) 640, 781, 815
HpyCH4III ACNGT 5 cut(s) 179, 506, 1108, 1124, 1130
HpyCH4IV ACGT 2 cut(s) 140, 282
HpyCH4V TGCA 4 cut(s) 42, 719, 1097, 1259
HpyF10VI GCNNNNNNNGC 3 cut(s) 166, 995, 1100
HpyF3I CTNAG 5 cut(s) 318, 371, 669, 688, 879
HpySE526I ACGT 2 cut(s) 140, 282
Hsp92I GRCGYC 1 cut(s) 140
KflI GGGWCCC 1 cut(s) 817
KspI CCGCGG 1 cut(s) 1043
Kzo9I GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
Lsp1109I GCAGC 6 cut(s) 144, 213, 852, 1081, 1087, 1109
LweI GCATC 1 cut(s) 720
MaeI CTAG 4 cut(s) 458, 875, 935, 1019
MaeII ACGT 2 cut(s) 140, 282
MaeIII GTNAC 2 cut(s) 691, 1124
MalI GATC 8 cut(s) 25, 78, 98, 296, 405, 469, 792, 1182
MboI GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
MboII GAAGA 9 cut(s) 57, 60, 530, 655, 668, 934, 975, 1178, 1220
MlsI TGGCCA 1 cut(s) 500
MluCI AATT 2 cut(s) 631, 956
MluNI TGGCCA 1 cut(s) 500
MlyI GAGTC 3 cut(s) 419, 530, 572
Mox20I TGGCCA 1 cut(s) 500
MscI TGGCCA 1 cut(s) 500
MseI TTAA 5 cut(s) 81, 630, 975, 1031, 1248
MslI CAYNNNNRTG 2 cut(s) 203, 335
Msp20I TGGCCA 1 cut(s) 500
MspA1I CMGCKG 5 cut(s) 157, 386, 1042, 1094, 1100
MspI CCGG 3 cut(s) 609, 821, 900
MspR9I CCNGG 3 cut(s) 136, 609, 821
MvaI CCWGG 1 cut(s) 136
MvnI CGCG 1 cut(s) 1042
MwoI GCNNNNNNNGC 3 cut(s) 166, 995, 1100
NciI CCSGG 2 cut(s) 609, 821
NdeII GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
NlaIV GGNNCC 3 cut(s) 400, 818, 819
NmuCI GTSAC 2 cut(s) 691, 1124
NspI RCATGY 1 cut(s) 1244
PagI TCATGA 2 cut(s) 793, 1054
PaqCI CACCTGC 1 cut(s) 126
PceI AGGCCT 1 cut(s) 660
PciI ACATGT 1 cut(s) 1240
PfeI GAWTC 6 cut(s) 214, 539, 673, 896, 964, 1058
PflFI GACNNNGTC 1 cut(s) 821
PflMI CCANNNNNTGG 1 cut(s) 135
PkrI GCNGC 9 cut(s) 156, 159, 228, 351, 385, 867, 1096, 1099, 1102
PleI GAGTC 3 cut(s) 419, 529, 571
PpsI GAGTC 3 cut(s) 419, 529, 571
Ppu21I YACGTR 1 cut(s) 283
PpuMI RGGWCCY 1 cut(s) 817
PscI ACATGT 1 cut(s) 1240
PsiI TTATAA 1 cut(s) 908
Psp5II RGGWCCY 1 cut(s) 817
Psp6I CCWGG 1 cut(s) 134
PspFI CCCAGC 1 cut(s) 386
PspGI CCWGG 1 cut(s) 134
PspN4I GGNNCC 3 cut(s) 400, 818, 819
PspPI GGNCC 3 cut(s) 482, 513, 817
PspPPI RGGWCCY 1 cut(s) 817
PstI CTGCAG 1 cut(s) 1099
PsyI GACNNNGTC 1 cut(s) 821
PvuII CAGCTG 2 cut(s) 1094, 1100
RsaI GTAC 2 cut(s) 344, 834
RsaNI GTAC 2 cut(s) 343, 833
RseI CAYNNNNRTG 2 cut(s) 203, 335
SacII CCGCGG 1 cut(s) 1043
SalI GTCGAC 1 cut(s) 419
SaqAI TTAA 5 cut(s) 81, 630, 975, 1031, 1248
SatI GCNGC 9 cut(s) 155, 158, 227, 350, 384, 866, 1095, 1098, 1101
Sau3AI GATC 8 cut(s) 23, 76, 96, 294, 403, 467, 790, 1180
Sau96I GGNCC 3 cut(s) 482, 513, 817
SchI GAGTC 3 cut(s) 419, 530, 572
ScrFI CCNGG 3 cut(s) 136, 609, 821
SfaNI GCATC 1 cut(s) 720
SfcI CTRYAG 1 cut(s) 1095
Sfr303I CCGCGG 1 cut(s) 1043
SgrBI CCGCGG 1 cut(s) 1043
SgrDI CGTCGACG 1 cut(s) 419
SinI GGWCC 2 cut(s) 513, 817
SmiMI CAYNNNNRTG 2 cut(s) 203, 335
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
Sse9I AATT 2 cut(s) 631, 956
SseBI AGGCCT 1 cut(s) 660
SsiI CCGC 7 cut(s) 155, 350, 384, 480, 760, 1040, 1042
SspI AATATT 1 cut(s) 1050
SspMI CTAG 4 cut(s) 458, 875, 935, 1019
StuI AGGCCT 1 cut(s) 660
StyD4I CCNGG 3 cut(s) 134, 607, 819
TaaI ACNGT 5 cut(s) 179, 506, 1108, 1124, 1130
TaiI ACGT 2 cut(s) 143, 285
TaqI TCGA 2 cut(s) 420, 591
TaqII GACCGA 1 cut(s) 530
TasI AATT 2 cut(s) 631, 956
TatI WGTACW 1 cut(s) 342
TauI GCSGC 3 cut(s) 157, 352, 386
TfiI GAWTC 6 cut(s) 214, 539, 673, 896, 964, 1058
Tru1I TTAA 5 cut(s) 81, 630, 975, 1031, 1248
Tru9I TTAA 5 cut(s) 81, 630, 975, 1031, 1248
TscAI CASTG 3 cut(s) 136, 673, 1230
TseFI GTSAC 2 cut(s) 691, 1124
TseI GCWGC 6 cut(s) 157, 226, 865, 1094, 1097, 1100
Tsp45I GTSAC 2 cut(s) 691, 1124
TspDTI ATGAA 7 cut(s) 221, 624, 783, 867, 1043, 1071, 1092
TspGWI ACGGA 2 cut(s) 406, 442
TspRI CASTG 3 cut(s) 136, 673, 1230
Tth111I GACNNNGTC 1 cut(s) 821
Van91I CCANNNNNTGG 1 cut(s) 135
VpaK11BI GGWCC 2 cut(s) 513, 817
XapI RAATTY 1 cut(s) 956
XceI RCATGY 1 cut(s) 1244
XcmI CCANNNNNNNNNTGG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 420
XspI CTAG 4 cut(s) 458, 875, 935, 1019
ZraI GACGTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.