Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000163

Physical Location & Seq

Genomic Coordinates Reverse (-)

8385050 .. 8388306

Gene Structure 3257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0107300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGCTTCATCAACCAAGTTTTTCTATGTTCTGGTTGCGGTTTGTGCCATCATCGCTTCCATTGCTTGCTGCACTTCCCGGGCTACTATTCCAGATTCAGATGGTGTGGCAGCGAATTTGACAGCCGGAGGATTCACTTCCGGATTGAATTTATACAGTAGTGTATTTCTCGAAGAATTGGATGTTACAAGATCAGACTTCCCAGCTGATTTTACTTTTGGAGTCGCTACCTCTGCTGGACAGACTGAAGGGTCAGCCAGAGAAGGAGGGAGAGGACCAAGTACATGGGATCATCGCGTTGATATACTGCCAGATGCAATTATAAACAGCGACAAATTTTCTACAGCAATTGATTCATATAGACTATACAAGGAAGATATTAAGATTATCAAGGAACTCGGAGTAAATTCTTACCGCTTCTCCATCTCCTGGAGTCGGATATTACCAAAGGGAAGCTTGAGTGGGGGAATTAATCAAGAGGGTGTTGATCACTATAACAGCTTGATTGACGAATTGATCAGAAATGGTATCAAACCTTTCGTGACGATTTTACACTCTGACTTTCCACAAGCTCTGGAGGAGAAGTATGGTGGTTACTTGAACCACTCATTCGTGAATGATTTTAAAGACTACAGTGAAATTTGCTTCAAATCATTCGGAGATAGAGTTAAAAATTGGTTCACAATCAATGAGCCAACAGTTTCTGCAGTTTACGGGTATGAACTTGGGATCGCTCCACCTGGGAAGTGTTCACTCAAGGAAGGAGTTTGTGTGTTTGGGTCTCCAGAGAACTGTTTAGTCCCGGCAGGTCCATGCAATTTTGGTGGTGATTCTAGCACAGAACCTTACATTGTAGCCCACAACCAAATTCTTGCTCATGCCACCGCGGCTAAGCTCTACAAAGAAAAATACCAAGCACAACAAAAGGGTGAGATTGGAATTGTCCTTGCTTCGAAATACTACGTGCCTCTTTCCGAATCACATGAAGATAAAATTGCAGCAGAACGACTTTTCGACTTCAACCTAGGATGGTTTATGGAACCATTTGTATATGGAGATTATCCCAAGAGTATGAAAGAGTCGGTGAAGGAAAGACTACCTAGTTTTTCTGCACAAGAGAAAAGTTTGATCAAGGGATGTCTAGATTTTGTTGGAATTAATTACTACACATCAACTTATGCTAGACATAAGACACCACCACCATTCGAACAATTGCGCTATTCTTTGGATGTATCAGCCGAAGAAACAGGTATGAAGGATGGAGTTTTTCTAGGCATGTTACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04010 ko04022 ko04371 ko04921 ko05202 ko05418 map04010 map04022 map04371 map04921 map05202 map05418

Pfam Domains

Protein Families

SRF-TF

Protein Analysis

428

Amino Acids

47.22

Weight (kDa)

5.31

Isoelectric Point (pI)

33.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	65 - 399	4.9e-105	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000163)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64020
fragaria_vesca	FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica	MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica	Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis	pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis	RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata	RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora	Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii	Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa	Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha	Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana	Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	323
AasI	GACNNNNNNGTC	1 cut(s)	250
Acc36I	ACCTGC	1 cut(s)	797
AccB7I	CCANNNNNTGG	1 cut(s)	429
AccII	CGCG	2 cut(s)	297, 887
AccIII	TCCGGA	1 cut(s)	140
AciI	CCGC	4 cut(s)	38, 415, 885, 887
AclWI	GGATC	2 cut(s)	297, 737
AcsI	RAATTY	6 cut(s)	115, 148, 335, 406, 639, 867
AcuI	CTGAAG	1 cut(s)	267
AfaI	GTAC	1 cut(s)	283
AfiI	CCNNNNNNNGG	2 cut(s)	429, 435
AgsI	TTSAA	4 cut(s)	148, 601, 649, 1021
AjnI	CCWGG	2 cut(s)	428, 739
AluBI	AGCT	5 cut(s)	206, 456, 501, 572, 895
AluI	AGCT	5 cut(s)	206, 456, 501, 572, 895
Alw26I	GTCTC	1 cut(s)	786
AlwI	GGATC	2 cut(s)	297, 737
AlwNI	CAGNNNCTG	1 cut(s)	704
Ama87I	CYCGRG	1 cut(s)	78
Aor13HI	TCCGGA	1 cut(s)	140
ApeKI	GCWGC	3 cut(s)	69, 110, 998
ApoI	RAATTY	6 cut(s)	115, 148, 335, 406, 639, 867
AseI	ATTAAT	2 cut(s)	471, 1158
AspA2I	CCTAGG	1 cut(s)	1024
AspLEI	GCGC	1 cut(s)	1218
AspS9I	GGNCC	2 cut(s)	275, 809
AsuC2I	CCSGG	3 cut(s)	79, 80, 803
AsuHPI	GGTGA	3 cut(s)	839, 941, 1096
AsuII	TTCGAA	2 cut(s)	953, 1206
AvaI	CYCGRG	1 cut(s)	78
AvaII	GGWCC	2 cut(s)	275, 809
AvrII	CCTAGG	1 cut(s)	1024
BbvI	GCAGC	3 cut(s)	56, 122, 1010
BccI	CCATC	5 cut(s)	56, 95, 431, 1023, 1253
BciT130I	CCWGG	2 cut(s)	430, 741
BclI	TGATCA	3 cut(s)	487, 516, 1128
BcnI	CCSGG	3 cut(s)	79, 80, 803
BcoDI	GTCTC	1 cut(s)	786
BfaI	CTAG	6 cut(s)	834, 1025, 1101, 1142, 1182, 1271
BfmI	CTRYAG	3 cut(s)	342, 631, 705
BfuAI	ACCTGC	1 cut(s)	797
BglI	GCCNNNNNGGC	1 cut(s)	887
BisI	GCNGC	4 cut(s)	70, 111, 888, 999
BlnI	CCTAGG	1 cut(s)	1024
BlpI	GCTNAGC	1 cut(s)	891
BlsI	GCNGC	4 cut(s)	71, 112, 889, 1000
Bme1390I	CCNGG	5 cut(s)	79, 80, 430, 741, 803
Bme18I	GGWCC	2 cut(s)	275, 809
BmeT110I	CYCGRG	1 cut(s)	78
BmgT120I	GGNCC	2 cut(s)	275, 809
BmiI	GGNNCC	1 cut(s)	1041
BmrFI	CCNGG	5 cut(s)	79, 80, 430, 741, 803
BmsI	GCATC	1 cut(s)	304
BpmI	CTGGAG	3 cut(s)	451, 596, 768
Bpu1102I	GCTNAGC	1 cut(s)	891
Bpu14I	TTCGAA	2 cut(s)	953, 1206
BpuEI	CTTGAG	2 cut(s)	478, 740
BpuMI	CCSGG	3 cut(s)	79, 80, 803
BsaAI	YACGTR	1 cut(s)	964
BsaI	GGTCTC	1 cut(s)	786
BsaJI	CCNNGG	4 cut(s)	78, 740, 885, 1024
BsaWI	WCCGGW	1 cut(s)	140
BsaXI	ACNNNNNCTCC	8 cut(s)	404, 434, 569, 599, 651, 681, 756, 786
Bsc4I	CCNNNNNNNGG	2 cut(s)	429, 435
Bse3DI	GCAATG	1 cut(s)	60
BseAI	TCCGGA	1 cut(s)	140
BseBI	CCWGG	2 cut(s)	430, 741
BseDI	CCNNGG	4 cut(s)	78, 740, 885, 1024
BseGI	GGATG	5 cut(s)	187, 1034, 1142, 1234, 1264
BseLI	CCNNNNNNNGG	2 cut(s)	429, 435
BseMI	GCAATG	1 cut(s)	60
BseRI	GAGGAG	1 cut(s)	593
BseXI	GCAGC	3 cut(s)	56, 122, 1010
BseYI	CCCAGC	1 cut(s)	202
BsgI	GTGCAG	2 cut(s)	55, 1095
Bsh1236I	CGCG	2 cut(s)	297, 887
BsiHKCI	CYCGRG	1 cut(s)	78
BsiSI	CCGG	4 cut(s)	79, 126, 141, 803
BslFI	GGGAC	1 cut(s)	785
BslI	CCNNNNNNNGG	2 cut(s)	429, 435
BsmAI	GTCTC	1 cut(s)	786
BsmFI	GGGAC	1 cut(s)	785
Bso31I	GGTCTC	1 cut(s)	786
BsoBI	CYCGRG	1 cut(s)	78
Bsp119I	TTCGAA	2 cut(s)	953, 1206
Bsp13I	TCCGGA	1 cut(s)	140
Bsp143I	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
Bsp1720I	GCTNAGC	1 cut(s)	891
BspACI	CCGC	4 cut(s)	38, 415, 885, 887
BspEI	TCCGGA	1 cut(s)	140
BspFNI	CGCG	2 cut(s)	297, 887
BspLI	GGNNCC	1 cut(s)	1041
BspMAI	CTGCAG	1 cut(s)	709
BspMI	ACCTGC	1 cut(s)	797
BspPI	GGATC	2 cut(s)	297, 737
BspT104I	TTCGAA	2 cut(s)	953, 1206
BspTNI	GGTCTC	1 cut(s)	786
BsrDI	GCAATG	1 cut(s)	60
BssECI	CCNNGG	4 cut(s)	78, 740, 885, 1024
BssMI	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
BssT1I	CCWWGG	1 cut(s)	1024
Bst2UI	CCWGG	2 cut(s)	430, 741
Bst4CI	ACNGT	4 cut(s)	158, 635, 700, 794
BstBAI	YACGTR	1 cut(s)	964
BstBI	TTCGAA	2 cut(s)	953, 1206
BstC8I	GCNNGC	1 cut(s)	67
BstDEI	CTNAG	1 cut(s)	891
BstDSI	CCRYGG	1 cut(s)	885
BstF5I	GGATG	5 cut(s)	187, 1034, 1142, 1234, 1264
BstFNI	CGCG	2 cut(s)	297, 887
BstHHI	GCGC	1 cut(s)	1218
BstKTI	GATC	6 cut(s)	194, 292, 490, 519, 732, 1131
BstMAI	GTCTC	1 cut(s)	786
BstMBI	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 53, 62, 233, 887
BstNI	CCWGG	2 cut(s)	430, 741
BstNSI	RCATGY	1 cut(s)	1279
BstSCI	CCNGG	5 cut(s)	77, 78, 428, 739, 801
BstSFI	CTRYAG	3 cut(s)	342, 631, 705
BstUI	CGCG	2 cut(s)	297, 887
BstV1I	GCAGC	3 cut(s)	56, 122, 1010
BstXI	CCANNNNNNTGG	1 cut(s)	285
BtgI	CCRYGG	1 cut(s)	885
BtgZI	GCGATG	2 cut(s)	37, 278
BtsCI	GGATG	5 cut(s)	187, 1034, 1142, 1234, 1264
BtsIMutI	CAGTG	1 cut(s)	640
BveI	ACCTGC	1 cut(s)	797
Cac8I	GCNNGC	1 cut(s)	67
CaiI	CAGNNNCTG	1 cut(s)	704
CfoI	GCGC	1 cut(s)	1218
Cfr13I	GGNCC	2 cut(s)	275, 809
Cfr42I	CCGCGG	1 cut(s)	888
Cfr9I	CCCGGG	1 cut(s)	78
Csp6I	GTAC	1 cut(s)	282
CspCI	CAANNNNNGTGG	2 cut(s)	805, 840
CviAII	CATG	5 cut(s)	285, 813, 878, 983, 1276
CviQI	GTAC	1 cut(s)	282
DdeI	CTNAG	1 cut(s)	891
DpnI	GATC	6 cut(s)	193, 291, 489, 518, 731, 1130
DpnII	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
DraI	TTTAAA	1 cut(s)	625
DrdI	GACNNNNNNGTC	1 cut(s)	250
DseDI	GACNNNNNNGTC	1 cut(s)	250
Eco130I	CCWWGG	1 cut(s)	1024
Eco31I	GGTCTC	1 cut(s)	786
Eco47I	GGWCC	2 cut(s)	275, 809
Eco57I	CTGAAG	1 cut(s)	267
Eco88I	CYCGRG	1 cut(s)	78
EcoRII	CCWGG	2 cut(s)	428, 739
EcoT14I	CCWWGG	1 cut(s)	1024
ErhI	CCWWGG	1 cut(s)	1024
FaeI	CATG	5 cut(s)	288, 816, 881, 986, 1279
FalI	AAGNNNNNCTT	2 cut(s)	440, 472
FaqI	GGGAC	1 cut(s)	785
FatI	CATG	5 cut(s)	284, 812, 877, 982, 1275
FbaI	TGATCA	3 cut(s)	487, 516, 1128
Fnu4HI	GCNGC	4 cut(s)	70, 111, 888, 999
FokI	GGATG	5 cut(s)	194, 1041, 1149, 1241, 1271
Fsp4HI	GCNGC	4 cut(s)	70, 111, 888, 999
FspBI	CTAG	6 cut(s)	834, 1025, 1101, 1142, 1182, 1271
GlaI	GCGC	1 cut(s)	1217
GluI	GCNGC	4 cut(s)	70, 111, 888, 999
GsaI	CCCAGC	1 cut(s)	206
GsuI	CTGGAG	3 cut(s)	451, 596, 768
HapII	CCGG	4 cut(s)	79, 126, 141, 803
HhaI	GCGC	1 cut(s)	1218
Hin1II	CATG	5 cut(s)	288, 816, 881, 986, 1279
Hin6I	GCGC	1 cut(s)	1216
HinP1I	GCGC	1 cut(s)	1216
HindIII	AAGCTT	1 cut(s)	454
HinfI	GANTC	8 cut(s)	95, 132, 222, 353, 433, 830, 977, 1079
HpaII	CCGG	4 cut(s)	79, 126, 141, 803
HphI	GGTGA	3 cut(s)	839, 941, 1096
Hpy166II	GTNNAC	3 cut(s)	681, 712, 752
Hpy188I	TCNGA	8 cut(s)	100, 196, 401, 438, 521, 559, 659, 976
Hpy188III	TCNNGA	9 cut(s)	92, 141, 170, 476, 541, 575, 613, 785, 1142
Hpy8I	GTNNAC	3 cut(s)	681, 712, 752
HpyAV	CCTTC	5 cut(s)	242, 257, 755, 1081, 1249
HpyCH4III	ACNGT	4 cut(s)	158, 635, 700, 794
HpyCH4IV	ACGT	1 cut(s)	963
HpyCH4V	TGCA	6 cut(s)	72, 317, 707, 816, 998, 1112
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 53, 62, 233, 887
HpyF3I	CTNAG	1 cut(s)	891
HpySE526I	ACGT	1 cut(s)	963
Hsp92II	CATG	5 cut(s)	288, 816, 881, 986, 1279
HspAI	GCGC	1 cut(s)	1216
Kpn2I	TCCGGA	1 cut(s)	140
Ksp22I	TGATCA	3 cut(s)	487, 516, 1128
KspI	CCGCGG	1 cut(s)	888
Kzo9I	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
LmnI	GCTCC	1 cut(s)	739
Lsp1109I	GCAGC	3 cut(s)	56, 122, 1010
LweI	GCATC	1 cut(s)	304
MaeI	CTAG	6 cut(s)	834, 1025, 1101, 1142, 1182, 1271
MaeII	ACGT	1 cut(s)	963
MaeIII	GTNAC	4 cut(s)	184, 541, 593, 1278
MalI	GATC	6 cut(s)	193, 291, 489, 518, 731, 1130
MboI	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
MboII	GAAGA	4 cut(s)	185, 386, 998, 1253
MfeI	CAATTG	2 cut(s)	348, 1211
MlyI	GAGTC	3 cut(s)	231, 442, 1088
MmeI	TCCRAC	2 cut(s)	416, 1132
MnlI	CCTC	7 cut(s)	122, 241, 260, 266, 472, 571, 978
MroI	TCCGGA	1 cut(s)	140
MseI	TTAA	6 cut(s)	381, 471, 624, 669, 1158, 1285
MspA1I	CMGCKG	2 cut(s)	206, 887
MspI	CCGG	4 cut(s)	79, 126, 141, 803
MspR9I	CCNGG	5 cut(s)	79, 80, 430, 741, 803
MunI	CAATTG	2 cut(s)	348, 1211
MvaI	CCWGG	2 cut(s)	430, 741
MvnI	CGCG	2 cut(s)	297, 887
MwoI	GCNNNNNNNGC	5 cut(s)	44, 53, 62, 233, 887
NciI	CCSGG	3 cut(s)	79, 80, 803
NdeII	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
NlaIII	CATG	5 cut(s)	288, 816, 881, 986, 1279
NlaIV	GGNNCC	1 cut(s)	1041
NmuCI	GTSAC	1 cut(s)	541
NspI	RCATGY	1 cut(s)	1279
NspV	TTCGAA	2 cut(s)	953, 1206
PfeI	GAWTC	5 cut(s)	95, 132, 353, 830, 977
PflMI	CCANNNNNTGG	1 cut(s)	429
PfoI	TCCNGGA	1 cut(s)	428
PkrI	GCNGC	4 cut(s)	71, 112, 889, 1000
PleI	GAGTC	3 cut(s)	230, 441, 1087
PpsI	GAGTC	3 cut(s)	230, 441, 1087
Ppu21I	YACGTR	1 cut(s)	964
PshBI	ATTAAT	2 cut(s)	471, 1158
PsiI	TTATAA	1 cut(s)	323
Psp6I	CCWGG	2 cut(s)	428, 739
PspFI	CCCAGC	1 cut(s)	202
PspGI	CCWGG	2 cut(s)	428, 739
PspN4I	GGNNCC	1 cut(s)	1041
PspPI	GGNCC	2 cut(s)	275, 809
PstI	CTGCAG	1 cut(s)	709
PstNI	CAGNNNCTG	1 cut(s)	704
PvuII	CAGCTG	1 cut(s)	206
RsaI	GTAC	1 cut(s)	283
RsaNI	GTAC	1 cut(s)	282
SacII	CCGCGG	1 cut(s)	888
SaqAI	TTAA	6 cut(s)	381, 471, 624, 669, 1158, 1285
SatI	GCNGC	4 cut(s)	70, 111, 888, 999
Sau3AI	GATC	6 cut(s)	191, 289, 487, 516, 729, 1128
Sau96I	GGNCC	2 cut(s)	275, 809
SchI	GAGTC	3 cut(s)	231, 442, 1088
ScrFI	CCNGG	5 cut(s)	79, 80, 430, 741, 803
SfaNI	GCATC	1 cut(s)	304
SfcI	CTRYAG	3 cut(s)	342, 631, 705
Sfr303I	CCGCGG	1 cut(s)	888
SfuI	TTCGAA	2 cut(s)	953, 1206
SgrBI	CCGCGG	1 cut(s)	888
SinI	GGWCC	2 cut(s)	275, 809
SmaI	CCCGGG	1 cut(s)	80
SmlI	CTYRAG	2 cut(s)	457, 755
SmoI	CTYRAG	2 cut(s)	457, 755
SsiI	CCGC	4 cut(s)	38, 415, 885, 887
SspMI	CTAG	6 cut(s)	834, 1025, 1101, 1142, 1182, 1271
StyD4I	CCNGG	5 cut(s)	77, 78, 428, 739, 801
StyI	CCWWGG	1 cut(s)	1024
TaaI	ACNGT	4 cut(s)	158, 635, 700, 794
TaiI	ACGT	1 cut(s)	966
TaqI	TCGA	4 cut(s)	171, 953, 1014, 1206
TatI	WGTACW	1 cut(s)	281
TauI	GCSGC	1 cut(s)	890
TfiI	GAWTC	5 cut(s)	95, 132, 353, 830, 977
Tru1I	TTAA	6 cut(s)	381, 471, 624, 669, 1158, 1285
Tru9I	TTAA	6 cut(s)	381, 471, 624, 669, 1158, 1285
TscAI	CASTG	1 cut(s)	640
TseFI	GTSAC	1 cut(s)	541
TseI	GCWGC	3 cut(s)	69, 110, 998
Tsp45I	GTSAC	1 cut(s)	541
TspDTI	ATGAA	5 cut(s)	345, 735, 999, 1088, 1268
TspMI	CCCGGG	1 cut(s)	78
TspRI	CASTG	1 cut(s)	640
Van91I	CCANNNNNTGG	1 cut(s)	429
VpaK11BI	GGWCC	2 cut(s)	275, 809
VspI	ATTAAT	2 cut(s)	471, 1158
XapI	RAATTY	6 cut(s)	115, 148, 335, 406, 639, 867
XbaI	TCTAGA	1 cut(s)	1141
XceI	RCATGY	1 cut(s)	1279
XmaI	CCCGGG	1 cut(s)	78
XmaJI	CCTAGG	1 cut(s)	1024
XspI	CTAG	6 cut(s)	834, 1025, 1101, 1142, 1182, 1271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.