FvH4_3g32870

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000163
Physical Location & Seq
Reverse (-)
28262606 .. 28263931
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g32870.t1

Sequence Viewer

Length: 1326 bp
ATGGCTGATTTACAACATCTCAAAGAACCCATCATCAACCAAACCAACGTCGCTTTGCAAATAACAAAGCAACTCCTTGAACAAGAATTCCATGGCAAGAACATGATCTACTCCCCGCAATCTATCCATATCGTCCTCAGCTTAATAGCCGCCAGGAACAACTGTCCCCAGCTTCTTTCATTTCTCAACTCCAAGTCCATCGCCGAACTCAACTCCCTCGCCGGCGATCTCGTCACTTCCGTTTTGGTTGATTTACCCACCAGAGGAGGGCCACGTTTGAACTTCACAAATGGCGTCTGGGTCGACGAGTCTGAACCTCTCGACGAATCTTACAAAAAGGTGGTGTTGGATTCCTACAAGGCGGCTCTGAACCATGTCGATTTCAAAACCAATCCGAAACAAGTGAGATCCCAAGTGAATGCATGGGTAAAGAAAGAAACCAAAGGCCTCATCCCTCAGATTCTTCCTCCCGGGTCGATCAAAATTGAGACGAGTCTCATCTGTGTAAACGCCTTATACTTCAAAGCAACTTGGAGCAAGCCGTACTTCACAAAACCAAAGACAAAAGAGCATGAGTTTCACCTAATGAACGGAGACTCGGTTATGAAAGTGCCTTTCATGACCAGCAATGATTGCCACTACATCGGTGCCTTTGACGGCTTCAAAGTCTTGAGACTTTTTTCCAGGAAGTATGAGGATGGTGAGTTATTTGAGGACTTGTCTCATTTGTCTCGTACTGGCAACCGTAAATACGACGACTACCGGAAGTTCTCTATTTTTTGGTTGCTTCCGGATGCAAGAGATGGGCTGCCGGCTCTGGTTGAAAGAGTTTGTACCGAGTCTGGGTTTCTAGATCGCCATACAGACCTTAGATATGTTAGGGTTGGGGAATTCTTGATCCCAAAGTTTAAAATGTCTTCCAGGTTTGAAGCTTCGGGTGTTCTGAAGAAAATGGGGCTGGGGGATGTTTTGGATTTGATAGAGATTGTTCATGAATCTGCTGTAATAGAGGTTGATGAAAATGGCACAACAGCTGCAGCTGCGACTTATGCTGTAATAAGTTGTAGCGCAGGCAAAGCCTCAGAGCCGGATGAAAAGTTAGACTTTGTGGCTGATCACCCCTTCATGTTTCTGATAAGGGAAGACATGACGGGAACAGTGCTCTTCAGTCTTCATGGGGCAGGTCCTCAATCCTCTTCCGGGTTGATTACCATTATATTGTTGGAAGATGTTCTTTGTAAGCAAGTTAATTTCTTAGGTTTTCATTATGCGTCCTACTTTTGTAGTCTGGATTATAGTTTTAGTTTACTTATTGTTCTCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

442

Amino Acids

49.51

Weight (kDa)

6.03

Isoelectric Point (pI)

34.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 14 - 389 1.3e-63 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1172
AccB1I GGYRCC 1 cut(s) 647
AccI GTMKAC 1 cut(s) 303
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 3 cut(s) 116, 150, 362
AclWI GGATC 2 cut(s) 402, 892
AcsI RAATTY 2 cut(s) 86, 890
AcuI CTGAAG 2 cut(s) 965, 1150
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 3 cut(s) 545, 736, 835
AfiI CCNNNNNNNGG 4 cut(s) 263, 267, 843, 1200
AgsI TTSAA 7 cut(s) 80, 280, 385, 523, 664, 824, 929
AjnI CCWGG 3 cut(s) 152, 683, 920
AloI GAACNNNNNNTCC 2 cut(s) 72, 104
AluBI AGCT 5 cut(s) 141, 172, 932, 1034, 1040
AluI AGCT 5 cut(s) 141, 172, 932, 1034, 1040
Alw21I GWGCWC 1 cut(s) 1164
Alw26I GTCTC 6 cut(s) 482, 500, 588, 667, 726, 735
AlwI GGATC 2 cut(s) 402, 892
Ama87I CYCGRG 1 cut(s) 470
Aor13HI TCCGGA 1 cut(s) 790
AoxI GGCC 2 cut(s) 269, 445
ApeKI GCWGC 4 cut(s) 808, 1034, 1037, 1040
ApoI RAATTY 2 cut(s) 86, 890
Asp700I GAANNNNTTC 1 cut(s) 1230
AspLEI GCGC 1 cut(s) 1070
AspS9I GGNCC 2 cut(s) 269, 1184
AsuC2I CCSGG 3 cut(s) 471, 472, 1201
AsuHPI GGTGA 3 cut(s) 572, 713, 1109
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 1 cut(s) 1184
BanI GGYRCC 1 cut(s) 647
BbsI GAAGAC 3 cut(s) 909, 1149, 1163
Bbv12I GWGCWC 1 cut(s) 1164
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 4 cut(s) 795, 1021, 1027, 1049
BccI CCATC 4 cut(s) 38, 206, 692, 797
BceAI ACGGC 2 cut(s) 526, 673
BciT130I CCWGG 3 cut(s) 154, 685, 922
BclI TGATCA 1 cut(s) 1114
BcnI CCSGG 3 cut(s) 471, 472, 1201
BcoDI GTCTC 6 cut(s) 482, 500, 588, 667, 726, 735
BfaI CTAG 1 cut(s) 851
BfmI CTRYAG 1 cut(s) 1035
BfuAI ACCTGC 1 cut(s) 1172
BisI GCNGC 6 cut(s) 150, 363, 809, 1035, 1038, 1041
BlsI GCNGC 6 cut(s) 151, 364, 810, 1036, 1039, 1042
Bme1390I CCNGG 6 cut(s) 154, 471, 472, 685, 922, 1201
Bme18I GGWCC 1 cut(s) 1184
BmeT110I CYCGRG 1 cut(s) 470
BmgT120I GGNCC 2 cut(s) 269, 1184
BmiI GGNNCC 1 cut(s) 649
BmrFI CCNGG 6 cut(s) 154, 471, 472, 685, 922, 1201
BmsI GCATC 1 cut(s) 784
BpiI GAAGAC 3 cut(s) 909, 1149, 1163
Bpu10I CCTNAGC 1 cut(s) 137
BpuEI CTTGAG 1 cut(s) 691
BpuMI CCSGG 3 cut(s) 471, 472, 1201
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 2 cut(s) 91, 470
BsaWI WCCGGW 2 cut(s) 762, 790
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 267, 843, 1200
Bse118I RCCGGY 2 cut(s) 221, 811
Bse1I ACTGG 1 cut(s) 742
Bse3DI GCAATG 1 cut(s) 634
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 3 cut(s) 154, 685, 922
BseDI CCNNGG 2 cut(s) 91, 470
BseGI GGATG 5 cut(s) 450, 703, 799, 970, 1096
BseLI CCNNNNNNNGG 4 cut(s) 263, 267, 843, 1200
BseMI GCAATG 1 cut(s) 634
BseMII CTCAG 3 cut(s) 151, 470, 1095
BseNI ACTGG 1 cut(s) 742
BseRI GAGGAG 1 cut(s) 279
BseXI GCAGC 4 cut(s) 795, 1021, 1027, 1049
BseYI CCCAGC 2 cut(s) 168, 958
BshFI GGCC 2 cut(s) 271, 447
BshNI GGYRCC 1 cut(s) 647
BsiHKAI GWGCWC 1 cut(s) 1164
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 7 cut(s) 222, 471, 763, 791, 812, 1088, 1200
BslFI GGGAC 1 cut(s) 150
BslI CCNNNNNNNGG 4 cut(s) 263, 267, 843, 1200
BsmAI GTCTC 6 cut(s) 482, 500, 588, 667, 726, 735
BsmBI CGTCTC 1 cut(s) 482
BsmFI GGGAC 1 cut(s) 150
BsmI GAATGC 1 cut(s) 424
BsnI GGCC 2 cut(s) 271, 447
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 1 cut(s) 1164
Bsp13I TCCGGA 1 cut(s) 790
Bsp143I GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
Bsp19I CCATGG 1 cut(s) 91
BspACI CCGC 3 cut(s) 116, 150, 362
BspANI GGCC 2 cut(s) 271, 447
BspCNI CTCAG 3 cut(s) 150, 469, 1094
BspEI TCCGGA 1 cut(s) 790
BspHI TCATGA 3 cut(s) 618, 991, 1322
BspLI GGNNCC 1 cut(s) 649
BspMAI CTGCAG 1 cut(s) 1039
BspMI ACCTGC 1 cut(s) 1172
BspPI GGATC 2 cut(s) 402, 892
BspQI GCTCTTC 1 cut(s) 1169
BspT107I GGYRCC 1 cut(s) 647
BsrDI GCAATG 1 cut(s) 634
BsrFI RCCGGY 2 cut(s) 221, 811
BsrI ACTGG 1 cut(s) 742
BssAI RCCGGY 2 cut(s) 221, 811
BssECI CCNNGG 2 cut(s) 91, 470
BssMI GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 1 cut(s) 91
Bst2UI CCWGG 3 cut(s) 154, 685, 922
Bst4CI ACNGT 3 cut(s) 164, 746, 1159
Bst6I CTCTTC 2 cut(s) 1169, 1201
BstACI GRCGYC 1 cut(s) 294
BstAPI GCANNNNNTGC 1 cut(s) 633
BstC8I GCNNGC 4 cut(s) 223, 539, 813, 1072
BstDEI CTNAG 5 cut(s) 137, 456, 869, 1081, 1255
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 5 cut(s) 450, 703, 799, 970, 1096
BstHHI GCGC 1 cut(s) 1070
BstKTI GATC 7 cut(s) 108, 229, 410, 480, 856, 900, 1117
BstMAI GTCTC 6 cut(s) 482, 500, 588, 667, 726, 735
BstMBI GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
BstMWI GCNNNNNNNGC 4 cut(s) 633, 1040, 1049, 1076
BstNI CCWGG 3 cut(s) 154, 685, 922
BstSCI CCNGG 6 cut(s) 152, 469, 470, 683, 920, 1199
BstSFI CTRYAG 1 cut(s) 1035
BstV1I GCAGC 4 cut(s) 795, 1021, 1027, 1049
BstV2I GAAGAC 3 cut(s) 909, 1149, 1163
BstX2I RGATCY 1 cut(s) 407
BstYI RGATCY 1 cut(s) 407
BsuRI GGCC 2 cut(s) 271, 447
BtgI CCRYGG 1 cut(s) 91
BtgZI GCGATG 1 cut(s) 184
BtsCI GGATG 5 cut(s) 450, 703, 799, 970, 1096
BtsIMutI CAGTG 1 cut(s) 1164
BveI ACCTGC 1 cut(s) 1172
Cac8I GCNNGC 4 cut(s) 223, 539, 813, 1072
CciI TCATGA 3 cut(s) 618, 991, 1322
CfoI GCGC 1 cut(s) 1070
Cfr10I RCCGGY 2 cut(s) 221, 811
Cfr13I GGNCC 2 cut(s) 269, 1184
Cfr9I CCCGGG 1 cut(s) 470
CseI GACGC 2 cut(s) 283, 1260
Csp6I GTAC 3 cut(s) 544, 735, 834
CviQI GTAC 3 cut(s) 544, 735, 834
DdeI CTNAG 5 cut(s) 137, 456, 869, 1081, 1255
DpnI GATC 7 cut(s) 107, 228, 409, 479, 855, 899, 1116
DpnII GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
DraI TTTAAA 1 cut(s) 910
Eam1104I CTCTTC 2 cut(s) 1169, 1201
EarI CTCTTC 2 cut(s) 1169, 1201
Eco130I CCWWGG 1 cut(s) 91
Eco147I AGGCCT 1 cut(s) 447
Eco47I GGWCC 1 cut(s) 1184
Eco57I CTGAAG 2 cut(s) 965, 1150
Eco88I CYCGRG 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 1184
EcoRI GAATTC 2 cut(s) 86, 890
EcoRII CCWGG 3 cut(s) 152, 683, 920
EcoT14I CCWWGG 1 cut(s) 91
EcoT22I ATGCAT 1 cut(s) 424
ErhI CCWWGG 1 cut(s) 91
Esp3I CGTCTC 1 cut(s) 482
FalI AAGNNNNNCTT 6 cut(s) 530, 562, 1088, 1120, 1218, 1250
FaqI GGGAC 1 cut(s) 150
FauI CCCGC 1 cut(s) 123
FbaI TGATCA 1 cut(s) 1114
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 6 cut(s) 150, 363, 809, 1035, 1038, 1041
FokI GGATG 5 cut(s) 437, 710, 806, 977, 1103
Fsp4HI GCNGC 6 cut(s) 150, 363, 809, 1035, 1038, 1041
FspBI CTAG 1 cut(s) 851
GlaI GCGC 1 cut(s) 1069
GluI GCNGC 6 cut(s) 150, 363, 809, 1035, 1038, 1041
GsaI CCCAGC 2 cut(s) 172, 962
HaeIII GGCC 2 cut(s) 271, 447
HapII CCGG 7 cut(s) 222, 471, 763, 791, 812, 1088, 1200
HgaI GACGC 2 cut(s) 283, 1260
HhaI GCGC 1 cut(s) 1070
Hin1I GRCGYC 1 cut(s) 294
Hin6I GCGC 1 cut(s) 1068
HinP1I GCGC 1 cut(s) 1068
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HindIII AAGCTT 1 cut(s) 930
HinfI GANTC 8 cut(s) 308, 326, 350, 460, 493, 596, 839, 995
HpaII CCGG 7 cut(s) 222, 471, 763, 791, 812, 1088, 1200
HphI GGTGA 3 cut(s) 572, 713, 1109
Hpy166II GTNNAC 3 cut(s) 304, 508, 1307
Hpy188I TCNGA 7 cut(s) 313, 369, 396, 459, 945, 1084, 1134
Hpy188III TCNNGA 9 cut(s) 320, 619, 670, 791, 851, 895, 992, 1289, 1323
Hpy8I GTNNAC 3 cut(s) 304, 508, 1307
Hpy99I CGWCG 4 cut(s) 53, 308, 326, 758
HpyAV CCTTC 1 cut(s) 1132
HpyCH4III ACNGT 3 cut(s) 164, 746, 1159
HpyCH4IV ACGT 2 cut(s) 48, 274
HpyCH4V TGCA 4 cut(s) 58, 422, 797, 1037
HpyF10VI GCNNNNNNNGC 4 cut(s) 633, 1040, 1049, 1076
HpyF3I CTNAG 5 cut(s) 137, 456, 869, 1081, 1255
HpySE526I ACGT 2 cut(s) 48, 274
Hsp92I GRCGYC 1 cut(s) 294
HspAI GCGC 1 cut(s) 1068
Kpn2I TCCGGA 1 cut(s) 790
KroI GCCGGC 2 cut(s) 221, 811
KroNI GCCGGC 2 cut(s) 223, 813
Ksp22I TGATCA 1 cut(s) 1114
Kzo9I GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
LguI GCTCTTC 1 cut(s) 1169
LmnI GCTCC 1 cut(s) 534
Lsp1109I GCAGC 4 cut(s) 795, 1021, 1027, 1049
LweI GCATC 1 cut(s) 784
MaeI CTAG 1 cut(s) 851
MaeII ACGT 2 cut(s) 48, 274
MaeIII GTNAC 1 cut(s) 232
MalI GATC 7 cut(s) 107, 228, 409, 479, 855, 899, 1116
MboI GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
MboII GAAGA 8 cut(s) 455, 909, 958, 1154, 1156, 1163, 1188, 1238
MflI RGATCY 1 cut(s) 407
MhlI GDGCHC 1 cut(s) 1164
MluCI AATT 4 cut(s) 86, 483, 890, 1249
MlyI GAGTC 4 cut(s) 317, 502, 590, 848
MmeI TCCRAC 2 cut(s) 327, 1203
Mph1103I ATGCAT 1 cut(s) 424
MreI CGCCGGCG 1 cut(s) 221
MroI TCCGGA 1 cut(s) 790
MroNI GCCGGC 2 cut(s) 221, 811
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 3 cut(s) 143, 909, 1248
MspA1I CMGCKG 2 cut(s) 1034, 1040
MspI CCGG 7 cut(s) 222, 471, 763, 791, 812, 1088, 1200
MspR9I CCNGG 6 cut(s) 154, 471, 472, 685, 922, 1201
Mva1269I GAATGC 1 cut(s) 424
MvaI CCWGG 3 cut(s) 154, 685, 922
MwoI GCNNNNNNNGC 4 cut(s) 633, 1040, 1049, 1076
NaeI GCCGGC 2 cut(s) 223, 813
NciI CCSGG 3 cut(s) 471, 472, 1201
NcoI CCATGG 1 cut(s) 91
NdeII GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
NgoMIV GCCGGC 2 cut(s) 221, 811
NlaIV GGNNCC 1 cut(s) 649
NmuCI GTSAC 1 cut(s) 232
NsiI ATGCAT 1 cut(s) 424
PagI TCATGA 3 cut(s) 618, 991, 1322
PceI AGGCCT 1 cut(s) 447
PciSI GCTCTTC 1 cut(s) 1169
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PctI GAATGC 1 cut(s) 424
PdiI GCCGGC 2 cut(s) 223, 813
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 4 cut(s) 326, 350, 460, 995
PfoI TCCNGGA 1 cut(s) 683
PkrI GCNGC 6 cut(s) 151, 364, 810, 1036, 1039, 1042
PleI GAGTC 4 cut(s) 316, 501, 590, 847
PpsI GAGTC 4 cut(s) 316, 501, 590, 847
PpuMI RGGWCCY 1 cut(s) 1184
Psp5II RGGWCCY 1 cut(s) 1184
Psp6I CCWGG 3 cut(s) 152, 683, 920
PspFI CCCAGC 2 cut(s) 168, 958
PspGI CCWGG 3 cut(s) 152, 683, 920
PspN4I GGNNCC 1 cut(s) 649
PspPI GGNCC 2 cut(s) 269, 1184
PspPPI RGGWCCY 1 cut(s) 1184
PsrI GAACNNNNNNTAC 2 cut(s) 92, 124
PstI CTGCAG 1 cut(s) 1039
PsuI RGATCY 1 cut(s) 407
PvuII CAGCTG 2 cut(s) 1034, 1040
RsaI GTAC 3 cut(s) 545, 736, 835
RsaNI GTAC 3 cut(s) 544, 735, 834
SalI GTCGAC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 1169
SaqAI TTAA 3 cut(s) 143, 909, 1248
SatI GCNGC 6 cut(s) 150, 363, 809, 1035, 1038, 1041
Sau3AI GATC 7 cut(s) 105, 226, 407, 477, 853, 897, 1114
Sau96I GGNCC 2 cut(s) 269, 1184
SchI GAGTC 4 cut(s) 317, 502, 590, 848
ScrFI CCNGG 6 cut(s) 154, 471, 472, 685, 922, 1201
SduI GDGCHC 1 cut(s) 1164
SfaNI GCATC 1 cut(s) 784
SfcI CTRYAG 1 cut(s) 1035
SgrAI CRCCGGYG 1 cut(s) 221
SinI GGWCC 1 cut(s) 1184
SmaI CCCGGG 1 cut(s) 472
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
Sse9I AATT 4 cut(s) 86, 483, 890, 1249
SseBI AGGCCT 1 cut(s) 447
SsiI CCGC 3 cut(s) 116, 150, 362
SspMI CTAG 1 cut(s) 851
StuI AGGCCT 1 cut(s) 447
StyD4I CCNGG 6 cut(s) 152, 469, 470, 683, 920, 1199
StyI CCWWGG 1 cut(s) 91
TaaI ACNGT 3 cut(s) 164, 746, 1159
TaiI ACGT 2 cut(s) 51, 277
TaqI TCGA 4 cut(s) 303, 321, 378, 476
TasI AATT 4 cut(s) 86, 483, 890, 1249
TauI GCSGC 2 cut(s) 152, 365
TfiI GAWTC 4 cut(s) 326, 350, 460, 995
Tru1I TTAA 3 cut(s) 143, 909, 1248
Tru9I TTAA 3 cut(s) 143, 909, 1248
TscAI CASTG 1 cut(s) 1164
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 4 cut(s) 808, 1034, 1037, 1040
Tsp45I GTSAC 1 cut(s) 232
TspGWI ACGGA 2 cut(s) 229, 606
TspMI CCCGGG 1 cut(s) 470
TspRI CASTG 1 cut(s) 1164
VpaK11BI GGWCC 1 cut(s) 1184
XapI RAATTY 2 cut(s) 86, 890
XbaI TCTAGA 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 1219
XmaI CCCGGG 1 cut(s) 470
XmiI GTMKAC 1 cut(s) 303
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 1 cut(s) 851
Zsp2I ATGCAT 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.