Rroxscaffold_3G00266910

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000163
Physical Location & Seq
Reverse (-)
60074582 .. 60080608
6027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266910.1

Sequence Viewer

Length: 1629 bp
ATGGAAAGGATGCTTGTTCCTAACTCAGGCTATGGTAGTTTTCACATTCCTGCTAATCCACAGTCTGATACAGAATCCAGTACTACTATCACCATAAGTGAACCAACATCGAGCAATGGTAGATCAAGTCAGCCTGGTTTTGGCACTACTAGTAGCCCAACTTTGGGCACTATCACCATAAACCCAAGTTCTGGCACTAGCATCACCATAACGCCAACTTCTGCAACTACTATCACCATAACCCCCAGTTCGGCCTCCACTACTGTCACCATAGCTCCAACTTCTGGCACTACCTCAACTTCTACATCTGGACACACTCCATTTCCATCCCCCTTCGCTGTGCCTTCCCAAGTGTCTCAGCCATTTGAGACTAGTACTTCTTCCTTGAACAGAATTAACAGTTGTCATCAAAAAGAGCCAGGCAACAGAGGTGGCTTTGGCCCTTCATTATTTAAAAGATCGCAGAATAGCTCCGGACTATGGTTTGGTAGTGCATGCCCTGCTACAAATCCGTTTGGAATGCTCCCTGAAAGGCCTCCTCAGCTTTCATTTGGTCATTCTGCTCCTTCACCATCAGTTCAAGACGGAATTTTGGGATCTTTGACAGCTACAATGGAAGAATCCATTGAAAACCAAACTGATGTCGCACTGAGAATCACAAAAGAGCTGCTTTTGACTAAAGGCAAGGACAAGAACATGAACATGGATGAGATGCTCAAATTTCTCAAAGCCAAATCCACCGAGCAGCTCAACGATCTTGCCTTGAAGCTCATTCCCCTGGTCTTTACTGATGGATCCCCAAGTGGCGGTCCTTGCTTGTCATTAGCCAATGGTGTTTGGGTTGAAATGTCTCTCCCTGTCTTGGCTTCCTTCAAACAGGTAGTGGAGAATGCGTACAAGGCAGTTCTAAAGCAAGTAGATTTCATGACCAAATCTGAGGAATCACGATGCGAAGTAAACTCATGGGCGGAAAAGGAGACCAGAGGCCTCATTAAAGATCTTCTTCCACCTGGAACAGTTGACAGCACCACAAGGATCATTCTTGCAAATGCCTTATACTTCAAAGGAGCTTGGGATCAGAAGTTTAATGAAACAAGAACAAAGATGTTTGATTTCCACCTTCTCAGTGGGAGGTCAGTTAAGGCACCCTTCATGACCAGTTGGAAGGACCAATTTATAAGTGTCTTTGACGGTTTCAAAGTCTTAAAGCTTCCTTACAAACAAGGTGAAGATCACAATCGGTGCTTCTCCATGTATGTGTTTCTTCCTAATGCAAGTAATGGGCTGTCATCTCTGGTTGAGAGAGTTTGTTCAGAGGCTGGGTTTTTAGGTCGCTATCTTCCTTGGACAAAAGTTGAAGTTAATAAATTTTTAATCCCAAAGTTTAAGATCACTTTTGGCTTTGAAGCTTGTCAATTTCTGGAAACTTTAGGTCTGAAGTTGCCATATTTGTCAGAGACGGTTGTTGGTGATGAACCAGTTGTTGAATTGATGATACATAAGTCCTTCATTGAAGTGATTGAGAAGATAGACTTTGTGGCAGATCACCCATTCCTTTTTCTGATCCGAGAAGAAGCAACTGGAGCTGTGATGTTCATTGGGCATGTCCTCGATCCCGTTGCAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

542

Amino Acids

59.09

Weight (kDa)

5.93

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 233 - 539 1.4e-59 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
AccB1I GGYRCC 1 cut(s) 1144
AccB7I CCANNNNNTGG 2 cut(s) 191, 284
AccIII TCCGGA 1 cut(s) 473
AciI CCGC 2 cut(s) 807, 968
AclWI GGATC 7 cut(s) 604, 789, 802, 1043, 1083, 1558, 1607
AcsI RAATTY 3 cut(s) 588, 719, 1367
AcuI CTGAAG 1 cut(s) 1457
AfaI GTAC 3 cut(s) 82, 376, 896
AhlI ACTAGT 2 cut(s) 149, 371
AjnI CCWGG 4 cut(s) 133, 418, 777, 1009
Alw26I GTCTC 5 cut(s) 360, 362, 855, 971, 1451
AlwI GGATC 7 cut(s) 604, 789, 802, 1043, 1083, 1558, 1607
AlwNI CAGNNNCTG 1 cut(s) 1319
Aor13HI TCCGGA 1 cut(s) 473
AoxI GGCC 4 cut(s) 252, 439, 533, 985
ApeKI GCWGC 2 cut(s) 667, 745
ApoI RAATTY 3 cut(s) 588, 719, 1367
AspS9I GGNCC 3 cut(s) 440, 809, 1168
AsuHPI GGTGA 9 cut(s) 82, 166, 196, 226, 259, 561, 1238, 1481, 1538
AvaII GGWCC 2 cut(s) 809, 1168
BaeGI GKGCMC 1 cut(s) 170
BaeI ACNNNNGTAYC 2 cut(s) 1487, 1520
BamHI GGATCC 1 cut(s) 794
BanI GGYRCC 1 cut(s) 1144
BbvCI CCTCAGC 1 cut(s) 540
BbvI GCAGC 2 cut(s) 654, 757
BccI CCATC 3 cut(s) 334, 580, 785
BcgI CGANNNNNNTGC 1 cut(s) 1601
BciT130I CCWGG 4 cut(s) 135, 420, 779, 1011
BcoDI GTCTC 5 cut(s) 360, 362, 855, 971, 1451
BcuI ACTAGT 2 cut(s) 149, 371
BfaI CTAG 3 cut(s) 150, 198, 372
BglII AGATCT 1 cut(s) 997
BisI GCNGC 2 cut(s) 668, 746
BlsI GCNGC 2 cut(s) 669, 747
BmcAI AGTACT 2 cut(s) 82, 376
Bme1390I CCNGG 4 cut(s) 135, 420, 779, 1011
Bme18I GGWCC 2 cut(s) 809, 1168
BmgT120I GGNCC 3 cut(s) 440, 809, 1168
BmiI GGNNCC 2 cut(s) 796, 1146
BmrFI CCNGG 4 cut(s) 135, 420, 779, 1011
BmrI ACTGGG 1 cut(s) 240
BmsI GCATC 3 cut(s) 210, 702, 938
BmuI ACTGGG 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 1602
Bpu10I CCTNAGC 1 cut(s) 540
BsaBI GATNNNNATC 1 cut(s) 1236
BsaI GGTCTC 1 cut(s) 971
BsaJI CCNNGG 2 cut(s) 777, 1343
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 4 cut(s) 259, 289, 878, 908
Bse1I ACTGG 5 cut(s) 78, 246, 1158, 1478, 1585
Bse3DI GCAATG 1 cut(s) 121
Bse8I GATNNNNATC 1 cut(s) 1236
BseAI TCCGGA 1 cut(s) 473
BseBI CCWGG 4 cut(s) 135, 420, 779, 1011
BseDI CCNNGG 2 cut(s) 777, 1343
BseGI GGATG 3 cut(s) 15, 326, 712
BseJI GATNNNNATC 1 cut(s) 1236
BseMI GCAATG 1 cut(s) 121
BseMII CTCAG 6 cut(s) 39, 371, 554, 641, 927, 1138
BseNI ACTGG 5 cut(s) 78, 246, 1158, 1478, 1585
BseRI GAGGAG 1 cut(s) 528
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 2 cut(s) 654, 757
BseYI CCCAGC 1 cut(s) 1319
BshFI GGCC 4 cut(s) 254, 441, 535, 987
BshNI GGYRCC 1 cut(s) 1144
BsiSI CCGG 1 cut(s) 474
BsmAI GTCTC 5 cut(s) 360, 362, 855, 971, 1451
BsmBI CGTCTC 1 cut(s) 1451
BsmI GAATGC 2 cut(s) 525, 895
BsnI GGCC 4 cut(s) 254, 441, 535, 987
Bso31I GGTCTC 1 cut(s) 971
Bsp1286I GDGCHC 1 cut(s) 170
Bsp13I TCCGGA 1 cut(s) 473
BspACI CCGC 2 cut(s) 807, 968
BspANI GGCC 4 cut(s) 254, 441, 535, 987
BspCNI CTCAG 6 cut(s) 38, 370, 553, 642, 928, 1137
BspEI TCCGGA 1 cut(s) 473
BspHI TCATGA 2 cut(s) 924, 1152
BspLI GGNNCC 2 cut(s) 796, 1146
BspPI GGATC 7 cut(s) 604, 789, 802, 1043, 1083, 1558, 1607
BspT107I GGYRCC 1 cut(s) 1144
BspTNI GGTCTC 1 cut(s) 971
BsrDI GCAATG 1 cut(s) 121
BsrI ACTGG 5 cut(s) 78, 246, 1158, 1478, 1585
BssECI CCNNGG 2 cut(s) 777, 1343
BssT1I CCWWGG 1 cut(s) 1343
Bst2UI CCWGG 4 cut(s) 135, 420, 779, 1011
Bst4CI ACNGT 6 cut(s) 63, 265, 401, 1018, 1193, 1462
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 1 cut(s) 496
BstDEI CTNAG 6 cut(s) 25, 357, 540, 650, 936, 1124
BstENI CCTNNNNNAGG 1 cut(s) 24
BstF5I GGATG 3 cut(s) 15, 326, 712
BstMAI GTCTC 5 cut(s) 360, 362, 855, 971, 1451
BstMWI GCNNNNNNNGC 5 cut(s) 500, 541, 813, 899, 1583
BstNI CCWGG 4 cut(s) 135, 420, 779, 1011
BstNSI RCATGY 2 cut(s) 498, 1607
BstSCI CCNGG 4 cut(s) 133, 418, 777, 1009
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 2 cut(s) 654, 757
BstX2I RGATCY 3 cut(s) 596, 794, 997
BstYI RGATCY 3 cut(s) 596, 794, 997
BsuRI GGCC 4 cut(s) 254, 441, 535, 987
BtsCI GGATG 3 cut(s) 15, 326, 712
BtsIMutI CAGTG 2 cut(s) 647, 1132
Cac8I GCNNGC 1 cut(s) 496
CaiI CAGNNNCTG 1 cut(s) 1319
CciI TCATGA 2 cut(s) 924, 1152
Cfr13I GGNCC 3 cut(s) 440, 809, 1168
Csp6I GTAC 3 cut(s) 81, 375, 895
CspCI CAANNNNNGTGG 2 cut(s) 412, 447
CviAII CATG 8 cut(s) 495, 697, 703, 925, 963, 1153, 1252, 1604
CviQI GTAC 3 cut(s) 81, 375, 895
DdeI CTNAG 6 cut(s) 25, 357, 540, 650, 936, 1124
DraI TTTAAA 1 cut(s) 454
EciI GGCGGA 1 cut(s) 983
Eco130I CCWWGG 1 cut(s) 1343
Eco147I AGGCCT 2 cut(s) 535, 987
Eco31I GGTCTC 1 cut(s) 971
Eco47I GGWCC 2 cut(s) 809, 1168
Eco57I CTGAAG 1 cut(s) 1457
EcoNI CCTNNNNNAGG 1 cut(s) 24
EcoRII CCWGG 4 cut(s) 133, 418, 777, 1009
EcoT14I CCWWGG 1 cut(s) 1343
ErhI CCWWGG 1 cut(s) 1343
Esp3I CGTCTC 1 cut(s) 1451
FaeI CATG 8 cut(s) 498, 700, 706, 928, 966, 1156, 1255, 1607
FalI AAGNNNNNCTT 8 cut(s) 654, 686, 987, 1019, 1133, 1165, 1517, 1549
FatI CATG 8 cut(s) 494, 696, 702, 924, 962, 1152, 1251, 1603
Fnu4HI GCNGC 2 cut(s) 668, 746
FokI GGATG 3 cut(s) 22, 313, 719
Fsp4HI GCNGC 2 cut(s) 668, 746
FspBI CTAG 3 cut(s) 150, 198, 372
GluI GCNGC 2 cut(s) 668, 746
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 1 cut(s) 1602
HaeIII GGCC 4 cut(s) 254, 441, 535, 987
HapII CCGG 1 cut(s) 474
Hin1II CATG 8 cut(s) 498, 700, 706, 928, 966, 1156, 1255, 1607
HincII GTYRAC 1 cut(s) 1021
HindII GTYRAC 1 cut(s) 1021
HindIII AAGCTT 2 cut(s) 1208, 1407
HinfI GANTC 4 cut(s) 74, 620, 654, 941
HpaII CCGG 1 cut(s) 474
HphI GGTGA 9 cut(s) 82, 166, 196, 226, 259, 561, 1238, 1481, 1538
Hpy166II GTNNAC 3 cut(s) 101, 958, 1021
Hpy188I TCNGA 8 cut(s) 67, 937, 1080, 1315, 1437, 1456, 1563, 1568
Hpy188III TCNNGA 7 cut(s) 309, 474, 581, 925, 945, 1153, 1421
Hpy8I GTNNAC 3 cut(s) 101, 958, 1021
HpyAV CCTTC 9 cut(s) 343, 354, 453, 576, 880, 1130, 1159, 1159, 1516
HpyCH4III ACNGT 6 cut(s) 63, 265, 401, 1018, 1193, 1462
HpyCH4V TGCA 5 cut(s) 224, 494, 1046, 1274, 1622
HpyF10VI GCNNNNNNNGC 5 cut(s) 500, 541, 813, 899, 1583
HpyF3I CTNAG 6 cut(s) 25, 357, 540, 650, 936, 1124
Hsp92II CATG 8 cut(s) 498, 700, 706, 928, 966, 1156, 1255, 1607
Kpn2I TCCGGA 1 cut(s) 473
LmnI GCTCC 6 cut(s) 280, 476, 528, 568, 1067, 1583
Lsp1109I GCAGC 2 cut(s) 654, 757
LweI GCATC 3 cut(s) 210, 702, 938
MaeI CTAG 3 cut(s) 150, 198, 372
MaeIII GTNAC 1 cut(s) 265
MboII GAAGA 9 cut(s) 372, 629, 992, 995, 1241, 1256, 1331, 1537, 1583
MflI RGATCY 3 cut(s) 596, 794, 997
MhlI GDGCHC 1 cut(s) 170
MluCI AATT 7 cut(s) 393, 588, 719, 1172, 1367, 1415, 1487
MmeI TCCRAC 2 cut(s) 302, 1142
MroI TCCGGA 1 cut(s) 473
MseI TTAA 9 cut(s) 396, 453, 993, 1086, 1140, 1205, 1362, 1373, 1386
MslI CAYNNNNRTG 3 cut(s) 701, 1256, 1514
MspI CCGG 1 cut(s) 474
MspR9I CCNGG 4 cut(s) 135, 420, 779, 1011
Mva1269I GAATGC 2 cut(s) 525, 895
MvaI CCWGG 4 cut(s) 135, 420, 779, 1011
MwoI GCNNNNNNNGC 5 cut(s) 500, 541, 813, 899, 1583
NlaIII CATG 8 cut(s) 498, 700, 706, 928, 966, 1156, 1255, 1607
NlaIV GGNNCC 2 cut(s) 796, 1146
NmuCI GTSAC 1 cut(s) 265
NspI RCATGY 2 cut(s) 498, 1607
PaeI GCATGC 1 cut(s) 498
PagI TCATGA 2 cut(s) 924, 1152
PceI AGGCCT 2 cut(s) 535, 987
PctI GAATGC 2 cut(s) 525, 895
PfeI GAWTC 4 cut(s) 74, 620, 654, 941
PflMI CCANNNNNTGG 2 cut(s) 191, 284
PkrI GCNGC 2 cut(s) 669, 747
PsiI TTATAA 1 cut(s) 1178
Psp6I CCWGG 4 cut(s) 133, 418, 777, 1009
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 4 cut(s) 133, 418, 777, 1009
PspN4I GGNNCC 2 cut(s) 796, 1146
PspPI GGNCC 3 cut(s) 440, 809, 1168
PstNI CAGNNNCTG 1 cut(s) 1319
PsuI RGATCY 3 cut(s) 596, 794, 997
RsaI GTAC 3 cut(s) 82, 376, 896
RsaNI GTAC 3 cut(s) 81, 375, 895
RseI CAYNNNNRTG 3 cut(s) 701, 1256, 1514
SaqAI TTAA 9 cut(s) 396, 453, 993, 1086, 1140, 1205, 1362, 1373, 1386
SatI GCNGC 2 cut(s) 668, 746
Sau96I GGNCC 3 cut(s) 440, 809, 1168
ScaI AGTACT 2 cut(s) 82, 376
ScrFI CCNGG 4 cut(s) 135, 420, 779, 1011
SduI GDGCHC 1 cut(s) 170
SfaNI GCATC 3 cut(s) 210, 702, 938
SinI GGWCC 2 cut(s) 809, 1168
SmiMI CAYNNNNRTG 3 cut(s) 701, 1256, 1514
SpeI ACTAGT 2 cut(s) 149, 371
SphI GCATGC 1 cut(s) 498
Sse9I AATT 7 cut(s) 393, 588, 719, 1172, 1367, 1415, 1487
SseBI AGGCCT 2 cut(s) 535, 987
SsiI CCGC 2 cut(s) 807, 968
SspMI CTAG 3 cut(s) 150, 198, 372
StuI AGGCCT 2 cut(s) 535, 987
StyD4I CCNGG 4 cut(s) 133, 418, 777, 1009
StyI CCWWGG 1 cut(s) 1343
TaaI ACNGT 6 cut(s) 63, 265, 401, 1018, 1193, 1462
TaqI TCGA 2 cut(s) 110, 1611
TasI AATT 7 cut(s) 393, 588, 719, 1172, 1367, 1415, 1487
TatI WGTACW 2 cut(s) 80, 374
TfiI GAWTC 4 cut(s) 74, 620, 654, 941
Tru1I TTAA 9 cut(s) 396, 453, 993, 1086, 1140, 1205, 1362, 1373, 1386
Tru9I TTAA 9 cut(s) 396, 453, 993, 1086, 1140, 1205, 1362, 1373, 1386
TscAI CASTG 2 cut(s) 654, 1132
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 2 cut(s) 667, 745
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 9 cut(s) 435, 537, 713, 913, 1104, 1141, 1488, 1498, 1585
TspGWI ACGGA 2 cut(s) 501, 600
TspRI CASTG 2 cut(s) 654, 1132
Van91I CCANNNNNTGG 2 cut(s) 191, 284
VpaK11BI GGWCC 2 cut(s) 809, 1168
XagI CCTNNNNNAGG 1 cut(s) 24
XapI RAATTY 3 cut(s) 588, 719, 1367
XceI RCATGY 2 cut(s) 498, 1607
XcmI CCANNNNNNNNNTGG 1 cut(s) 1124
XspI CTAG 3 cut(s) 150, 198, 372
ZrmI AGTACT 2 cut(s) 82, 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.