RchiOBHm_Chr5g0005751

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000163
Physical Location & Seq
Forward (+)
3645322 .. 3646719
1398 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28694

Sequence Viewer

Length: 1275 bp
ATGTTTAATCTAAAATCTTTATCTTCCACAGAATTAATGGCTCTTCGCAGAGGTTCGAAACGTGCACGATCCCCATCCCCAGCACCCCCTTCTTTCAAAGCATCAAAGTCTCTCAGAAAATCCATTCAGGACCAAACCAACGTTGCACTAGAAATCACAAGGCAACTGCTTTTGACCAAAGAAGTCATGGACATGAACGTGGTGTTCTCGCCGCTGTCCATCCATGTGGTTCTTAGCATGATAGCAGCTGGCGCCAAGGGTTTCAACCAAGAAGAGATGCTCAATTTCCTCAGGTCCAAGTCCATACACGAGCTCAACAATCTCGCCTCCAATGTCATCCCACTAGTCTTTGCGGATGGATCTGAACACGGCGGGCCTTTCTTGTCATTTGCCAATGGGGTTTGGATAGATGAATCTCTCTCTATCAAGCCTTCTTTCAAAAATGTACTGGACACTGATTACAAGGCGGCCTTGAAACAAGTTGATTTCAAGACTGAGCCAGAGGAAGTGCGACATGAAGTGAATTCCTGGGGGGAAAGGAAGACCAATGGTCTCATTAAAAGCATTCTTCCCCTTGGTTCAGTTTCTAGGACAACAAGGCTCATTCTTGCAAATGCTGTATACTTTAAAGGAGAATGGGATGAGGAGTTTGATGCATCAGAGACAAGAGTGTACAAATTTAACCTTCTCCATAATGGGGGCTCAGTTAAGGCACCCTTCATGACAAAGTCGTCGAAACAGTTTATTAGTGTCTTTCAAAGCTTCAAAGTCTTGAAGCTTCCCTACAAACAAGGTAAAGATCATGAGCGAATGTTCTCCATGTACATTTTTCTTCCAAATGCAAGGAACGGGCTGCGAGCGTTGGTCGAGAAGTTTTGCTCCAAGTTTGAGTTCATAGATAGCCATCTTCCTTACATAGAAGTTCCAGTGGGTGAATTCTTAATCCCAAAGTTTAAGATTTCCTGTGGTTTTGAGGCTTCCAAACTTCTGGAGACTTTGGGATTCTCTCCTGGAAGTTTGACAGAGATGGTGGACTCACCTGAGCCCCTACATGTTTCCGACATATTCCACAAAGCCTTCATTGAAGTTAATGAAAAAGGCACAGAAGCTGCTGCTGTAACGGCTTTTTGTTTTGCGACGAGCTCGTTCCCACCCCGGCCCCCTCCTGATCCGATAGATTTTGTGGCAGATCACCCATTCCTTTATCTCATCAGAGAAGAGGTGACTAAAACGGTCATGTTCGTTGGGCATGTCCTCAATCCTATTGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

424

Amino Acids

47.55

Weight (kDa)

7.19

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 45 - 421 6.9e-88 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 730
AccB1I GGYRCC 2 cut(s) 251, 712
AccI GTMKAC 1 cut(s) 621
AciI CCGC 4 cut(s) 212, 353, 372, 467
AclI AACGTT 1 cut(s) 141
AclWI GGATC 3 cut(s) 63, 367, 1163
AcsI RAATTY 3 cut(s) 523, 677, 935
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 3 cut(s) 447, 674, 824
AfiI CCNNNNNNNGG 1 cut(s) 697
AflIII ACRYGT 1 cut(s) 1051
AhdI GACNNNNNGTC 1 cut(s) 549
AhlI ACTAGT 1 cut(s) 343
AjnI CCWGG 2 cut(s) 527, 1009
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AluBI AGCT 6 cut(s) 248, 313, 762, 778, 1109, 1143
AluI AGCT 6 cut(s) 248, 313, 762, 778, 1109, 1143
Alw21I GWGCWC 3 cut(s) 67, 315, 1145
Alw26I GTCTC 4 cut(s) 114, 557, 656, 986
Alw44I GTGCAC 1 cut(s) 63
AlwI GGATC 3 cut(s) 63, 367, 1163
AlwNI CAGNNNCTG 1 cut(s) 1109
AoxI GGCC 3 cut(s) 374, 468, 1157
ApaLI GTGCAC 1 cut(s) 63
ApeKI GCWGC 4 cut(s) 245, 853, 1109, 1112
ApoI RAATTY 3 cut(s) 523, 677, 935
AseI ATTAAT 1 cut(s) 35
AspLEI GCGC 1 cut(s) 254
AspS9I GGNCC 4 cut(s) 130, 294, 374, 1158
AsuC2I CCSGG 1 cut(s) 1156
AsuHPI GGTGA 4 cut(s) 944, 1029, 1184, 1234
AsuII TTCGAA 1 cut(s) 56
AvaII GGWCC 2 cut(s) 130, 294
AxyI CCTNAGG 1 cut(s) 290
BaeGI GKGCMC 1 cut(s) 67
BanI GGYRCC 2 cut(s) 251, 712
BanII GRGCYC 4 cut(s) 315, 704, 1047, 1145
BarI GAAGNNNNNNTAC 2 cut(s) 767, 799
BauI CACGAG 1 cut(s) 308
BbsI GAAGAC 1 cut(s) 548
Bbv12I GWGCWC 3 cut(s) 67, 315, 1145
BbvI GCAGC 4 cut(s) 257, 840, 1096, 1099
BccI CCATC 5 cut(s) 82, 227, 350, 912, 1021
BceAI ACGGC 2 cut(s) 385, 1137
BciT130I CCWGG 2 cut(s) 529, 1011
BcnI CCSGG 1 cut(s) 1156
BcoDI GTCTC 4 cut(s) 114, 557, 656, 986
BcuI ACTAGT 1 cut(s) 343
BfaI CTAG 3 cut(s) 149, 344, 588
BfoI RGCGCY 1 cut(s) 255
BisI GCNGC 6 cut(s) 212, 246, 468, 854, 1110, 1113
BlsI GCNGC 6 cut(s) 213, 247, 469, 855, 1111, 1114
Bme1390I CCNGG 3 cut(s) 529, 1011, 1156
Bme18I GGWCC 2 cut(s) 130, 294
BmeRI GACNNNNNGTC 1 cut(s) 549
BmgT120I GGNCC 4 cut(s) 130, 294, 374, 1158
BmiI GGNNCC 3 cut(s) 253, 714, 1160
BmrFI CCNGG 3 cut(s) 529, 1011, 1156
BmsI GCATC 4 cut(s) 110, 267, 643, 665
BpiI GAAGAC 1 cut(s) 548
BpmI CTGGAG 1 cut(s) 1010
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 56
BpuMI CCSGG 1 cut(s) 1156
BsaBI GATNNNNATC 2 cut(s) 73, 903
BsaHI GRCGYC 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 557
BsaJI CCNNGG 4 cut(s) 255, 528, 574, 1154
Bsc4I CCNNNNNNNGG 1 cut(s) 697
Bse1I ACTGG 2 cut(s) 453, 926
Bse21I CCTNAGG 1 cut(s) 290
Bse8I GATNNNNATC 2 cut(s) 73, 903
BseBI CCWGG 2 cut(s) 529, 1011
BseDI CCNNGG 4 cut(s) 255, 528, 574, 1154
BseGI GGATG 5 cut(s) 74, 219, 336, 361, 646
BseJI GATNNNNATC 2 cut(s) 73, 903
BseLI CCNNNNNNNGG 1 cut(s) 697
BseMII CTCAG 5 cut(s) 127, 304, 486, 717, 1032
BseNI ACTGG 2 cut(s) 453, 926
BseRI GAGGAG 1 cut(s) 659
BseSI GKGCMC 1 cut(s) 67
BseXI GCAGC 4 cut(s) 257, 840, 1096, 1099
BseYI CCCAGC 1 cut(s) 79
BshFI GGCC 3 cut(s) 376, 470, 1159
BshNI GGYRCC 2 cut(s) 251, 712
BsiHKAI GWGCWC 3 cut(s) 67, 315, 1145
BsiSI CCGG 1 cut(s) 1156
BslI CCNNNNNNNGG 1 cut(s) 697
BsmAI GTCTC 4 cut(s) 114, 557, 656, 986
BsmI GAATGC 1 cut(s) 564
BsnI GGCC 3 cut(s) 376, 470, 1159
Bso31I GGTCTC 1 cut(s) 557
Bsp119I TTCGAA 1 cut(s) 56
Bsp1286I GDGCHC 5 cut(s) 67, 315, 704, 1047, 1145
Bsp1407I TGTACA 2 cut(s) 672, 822
Bsp143I GATC 5 cut(s) 68, 359, 799, 1168, 1189
BspACI CCGC 4 cut(s) 212, 353, 372, 467
BspANI GGCC 3 cut(s) 376, 470, 1159
BspCNI CTCAG 5 cut(s) 126, 303, 487, 716, 1033
BspHI TCATGA 2 cut(s) 720, 802
BspLI GGNNCC 3 cut(s) 253, 714, 1160
BspPI GGATC 3 cut(s) 63, 367, 1163
BspQI GCTCTTC 1 cut(s) 48
BspT104I TTCGAA 1 cut(s) 56
BspT107I GGYRCC 2 cut(s) 251, 712
BspTNI GGTCTC 1 cut(s) 557
BsrGI TGTACA 2 cut(s) 672, 822
BsrI ACTGG 2 cut(s) 453, 926
BssECI CCNNGG 4 cut(s) 255, 528, 574, 1154
BssMI GATC 5 cut(s) 68, 359, 799, 1168, 1189
BssNAI GTATAC 1 cut(s) 622
BssNI GRCGYC 1 cut(s) 252
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 2 cut(s) 255, 574
Bst1107I GTATAC 1 cut(s) 622
Bst2BI CACGAG 1 cut(s) 308
Bst2UI CCWGG 2 cut(s) 529, 1011
Bst4CI ACNGT 2 cut(s) 741, 1234
Bst6I CTCTTC 3 cut(s) 48, 267, 1212
BstACI GRCGYC 1 cut(s) 252
BstAUI TGTACA 2 cut(s) 672, 822
BstBI TTCGAA 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 250, 374, 858
BstDEI CTNAG 6 cut(s) 113, 233, 290, 495, 703, 1041
BstF5I GGATG 5 cut(s) 74, 219, 336, 361, 646
BstH2I RGCGCY 1 cut(s) 255
BstHHI GCGC 1 cut(s) 254
BstKTI GATC 5 cut(s) 71, 362, 802, 1171, 1192
BstMAI GTCTC 4 cut(s) 114, 557, 656, 986
BstMBI GATC 5 cut(s) 68, 359, 799, 1168, 1189
BstMWI GCNNNNNNNGC 2 cut(s) 251, 1121
BstNI CCWGG 2 cut(s) 529, 1011
BstNSI RCATGY 2 cut(s) 1055, 1253
BstSCI CCNGG 3 cut(s) 527, 1009, 1154
BstSLI GKGCMC 1 cut(s) 67
BstV1I GCAGC 4 cut(s) 257, 840, 1096, 1099
BstV2I GAAGAC 1 cut(s) 548
BstX2I RGATCY 1 cut(s) 359
BstXI CCANNNNNNTGG 2 cut(s) 226, 988
BstYI RGATCY 1 cut(s) 359
BstZ17I GTATAC 1 cut(s) 622
Bsu36I CCTNAGG 1 cut(s) 290
BsuRI GGCC 3 cut(s) 376, 470, 1159
BtsCI GGATG 5 cut(s) 74, 219, 336, 361, 646
BtsIMutI CAGTG 2 cut(s) 453, 933
Cac8I GCNNGC 3 cut(s) 250, 374, 858
CaiI CAGNNNCTG 1 cut(s) 1109
CciI TCATGA 2 cut(s) 720, 802
CfoI GCGC 1 cut(s) 254
Cfr13I GGNCC 4 cut(s) 130, 294, 374, 1158
Csp6I GTAC 3 cut(s) 446, 673, 823
CviQI GTAC 3 cut(s) 446, 673, 823
DdeI CTNAG 6 cut(s) 113, 233, 290, 495, 703, 1041
DinI GGCGCC 1 cut(s) 253
DpnI GATC 5 cut(s) 70, 361, 801, 1170, 1191
DpnII GATC 5 cut(s) 68, 359, 799, 1168, 1189
DraI TTTAAA 1 cut(s) 628
DrdI GACNNNNNNGTC 1 cut(s) 730
DriI GACNNNNNGTC 1 cut(s) 549
DseDI GACNNNNNNGTC 1 cut(s) 730
Eam1104I CTCTTC 3 cut(s) 48, 267, 1212
Eam1105I GACNNNNNGTC 1 cut(s) 549
EarI CTCTTC 3 cut(s) 48, 267, 1212
Ecl136II GAGCTC 2 cut(s) 313, 1143
Eco130I CCWWGG 2 cut(s) 255, 574
Eco24I GRGCYC 4 cut(s) 315, 704, 1047, 1145
Eco31I GGTCTC 1 cut(s) 557
Eco47I GGWCC 2 cut(s) 130, 294
Eco53kI GAGCTC 2 cut(s) 313, 1143
Eco81I CCTNAGG 1 cut(s) 290
EcoICRI GAGCTC 2 cut(s) 313, 1143
EcoRI GAATTC 2 cut(s) 523, 935
EcoRII CCWGG 2 cut(s) 527, 1009
EcoT14I CCWWGG 2 cut(s) 255, 574
EcoT22I ATGCAT 1 cut(s) 658
EcoT38I GRGCYC 4 cut(s) 315, 704, 1047, 1145
EgeI GGCGCC 1 cut(s) 253
EheI GGCGCC 1 cut(s) 253
ErhI CCWWGG 2 cut(s) 255, 574
FalI AAGNNNNNCTT 4 cut(s) 455, 487, 701, 733
FauI CCCGC 1 cut(s) 365
FblI GTMKAC 1 cut(s) 621
Fnu4HI GCNGC 6 cut(s) 212, 246, 468, 854, 1110, 1113
FokI GGATG 5 cut(s) 61, 206, 323, 368, 653
FriOI GRGCYC 4 cut(s) 315, 704, 1047, 1145
Fsp4HI GCNGC 6 cut(s) 212, 246, 468, 854, 1110, 1113
FspBI CTAG 3 cut(s) 149, 344, 588
GlaI GCGC 1 cut(s) 253
GluI GCNGC 6 cut(s) 212, 246, 468, 854, 1110, 1113
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 1010
HaeII RGCGCY 1 cut(s) 255
HaeIII GGCC 3 cut(s) 376, 470, 1159
HapII CCGG 1 cut(s) 1156
HhaI GCGC 1 cut(s) 254
Hin1I GRCGYC 1 cut(s) 252
Hin6I GCGC 1 cut(s) 252
HinP1I GCGC 1 cut(s) 252
HindIII AAGCTT 2 cut(s) 760, 776
HinfI GANTC 3 cut(s) 413, 1002, 1034
HpaII CCGG 1 cut(s) 1156
HphI GGTGA 4 cut(s) 944, 1029, 1184, 1234
Hpy166II GTNNAC 4 cut(s) 65, 622, 673, 1033
Hpy188I TCNGA 6 cut(s) 116, 364, 661, 1060, 1173, 1214
Hpy188III TCNNGA 8 cut(s) 128, 490, 721, 772, 803, 868, 989, 1166
Hpy8I GTNNAC 4 cut(s) 65, 622, 673, 1033
Hpy99I CGWCG 2 cut(s) 736, 1141
HpyAV CCTTC 5 cut(s) 99, 441, 695, 727, 1087
HpyCH4III ACNGT 2 cut(s) 741, 1234
HpyCH4IV ACGT 3 cut(s) 61, 141, 198
HpyCH4V TGCA 5 cut(s) 65, 146, 611, 656, 842
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 1121
HpyF3I CTNAG 6 cut(s) 113, 233, 290, 495, 703, 1041
HpySE526I ACGT 3 cut(s) 61, 141, 198
Hsp92I GRCGYC 1 cut(s) 252
HspAI GCGC 1 cut(s) 252
KasI GGCGCC 1 cut(s) 251
Kzo9I GATC 5 cut(s) 68, 359, 799, 1168, 1189
LguI GCTCTTC 1 cut(s) 48
LmnI GCTCC 1 cut(s) 884
Lsp1109I GCAGC 4 cut(s) 257, 840, 1096, 1099
LweI GCATC 4 cut(s) 110, 267, 643, 665
MaeI CTAG 3 cut(s) 149, 344, 588
MaeII ACGT 3 cut(s) 61, 141, 198
MaeIII GTNAC 2 cut(s) 1117, 1222
MalI GATC 5 cut(s) 70, 361, 801, 1170, 1191
MboI GATC 5 cut(s) 68, 359, 799, 1168, 1189
MboII GAAGA 8 cut(s) 15, 35, 284, 553, 560, 824, 899, 1229
MflI RGATCY 1 cut(s) 359
MhlI GDGCHC 5 cut(s) 67, 315, 704, 1047, 1145
MluCI AATT 5 cut(s) 32, 283, 523, 677, 935
Mly113I GGCGCC 1 cut(s) 252
MlyI GAGTC 1 cut(s) 1028
MmeI TCCRAC 1 cut(s) 1083
MnlI CCTC 9 cut(s) 44, 299, 337, 496, 637, 967, 1173, 1213, 1265
Mph1103I ATGCAT 1 cut(s) 658
MseI TTAA 9 cut(s) 6, 35, 558, 627, 681, 708, 941, 954, 1089
MslI CAYNNNNRTG 3 cut(s) 191, 197, 224
MspA1I CMGCKG 2 cut(s) 214, 248
MspI CCGG 1 cut(s) 1156
MspR9I CCNGG 3 cut(s) 529, 1011, 1156
Mva1269I GAATGC 1 cut(s) 564
MvaI CCWGG 2 cut(s) 529, 1011
MwoI GCNNNNNNNGC 2 cut(s) 251, 1121
NarI GGCGCC 1 cut(s) 252
NciI CCSGG 1 cut(s) 1156
NdeII GATC 5 cut(s) 68, 359, 799, 1168, 1189
NlaIV GGNNCC 3 cut(s) 253, 714, 1160
NmuCI GTSAC 1 cut(s) 1222
NsiI ATGCAT 1 cut(s) 658
NspI RCATGY 2 cut(s) 1055, 1253
NspV TTCGAA 1 cut(s) 56
PagI TCATGA 2 cut(s) 720, 802
PciI ACATGT 1 cut(s) 1051
PciSI GCTCTTC 1 cut(s) 48
PctI GAATGC 1 cut(s) 564
PfeI GAWTC 2 cut(s) 413, 1002
PflFI GACNNNGTC 1 cut(s) 727
PfoI TCCNGGA 1 cut(s) 1009
PkrI GCNGC 6 cut(s) 213, 247, 469, 855, 1111, 1114
PleI GAGTC 1 cut(s) 1028
PluTI GGCGCC 1 cut(s) 255
PpsI GAGTC 1 cut(s) 1028
PscI ACATGT 1 cut(s) 1051
PshBI ATTAAT 1 cut(s) 35
Psp124BI GAGCTC 2 cut(s) 315, 1145
Psp1406I AACGTT 1 cut(s) 141
Psp6I CCWGG 2 cut(s) 527, 1009
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 2 cut(s) 527, 1009
PspN4I GGNNCC 3 cut(s) 253, 714, 1160
PspPI GGNCC 4 cut(s) 130, 294, 374, 1158
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 1 cut(s) 359
PsyI GACNNNGTC 1 cut(s) 727
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 3 cut(s) 447, 674, 824
RsaNI GTAC 3 cut(s) 446, 673, 823
RseI CAYNNNNRTG 3 cut(s) 191, 197, 224
SacI GAGCTC 2 cut(s) 315, 1145
SapI GCTCTTC 1 cut(s) 48
SaqAI TTAA 9 cut(s) 6, 35, 558, 627, 681, 708, 941, 954, 1089
SatI GCNGC 6 cut(s) 212, 246, 468, 854, 1110, 1113
Sau3AI GATC 5 cut(s) 68, 359, 799, 1168, 1189
Sau96I GGNCC 4 cut(s) 130, 294, 374, 1158
SchI GAGTC 1 cut(s) 1028
ScrFI CCNGG 3 cut(s) 529, 1011, 1156
SduI GDGCHC 5 cut(s) 67, 315, 704, 1047, 1145
SfaNI GCATC 4 cut(s) 110, 267, 643, 665
SfoI GGCGCC 1 cut(s) 253
SfuI TTCGAA 1 cut(s) 56
SinI GGWCC 2 cut(s) 130, 294
SmiMI CAYNNNNRTG 3 cut(s) 191, 197, 224
SpeI ACTAGT 1 cut(s) 343
Sse9I AATT 5 cut(s) 32, 283, 523, 677, 935
SsiI CCGC 4 cut(s) 212, 353, 372, 467
SspDI GGCGCC 1 cut(s) 251
SspMI CTAG 3 cut(s) 149, 344, 588
SstI GAGCTC 2 cut(s) 315, 1145
StyD4I CCNGG 3 cut(s) 527, 1009, 1154
StyI CCWWGG 2 cut(s) 255, 574
TaaI ACNGT 2 cut(s) 741, 1234
TaiI ACGT 3 cut(s) 64, 144, 201
TaqI TCGA 3 cut(s) 56, 734, 867
TasI AATT 5 cut(s) 32, 283, 523, 677, 935
TatI WGTACW 3 cut(s) 445, 672, 822
TauI GCSGC 2 cut(s) 214, 470
TfiI GAWTC 2 cut(s) 413, 1002
Tru1I TTAA 9 cut(s) 6, 35, 558, 627, 681, 708, 941, 954, 1089
Tru9I TTAA 9 cut(s) 6, 35, 558, 627, 681, 708, 941, 954, 1089
TscAI CASTG 2 cut(s) 460, 933
TseFI GTSAC 1 cut(s) 1222
TseI GCWGC 4 cut(s) 245, 853, 1109, 1112
Tsp45I GTSAC 1 cut(s) 1222
TspDTI ATGAA 7 cut(s) 209, 426, 531, 709, 883, 1069, 1107
TspRI CASTG 2 cut(s) 460, 933
Tth111I GACNNNGTC 1 cut(s) 727
VneI GTGCAC 1 cut(s) 63
VpaK11BI GGWCC 2 cut(s) 130, 294
VspI ATTAAT 1 cut(s) 35
XapI RAATTY 3 cut(s) 523, 677, 935
XceI RCATGY 2 cut(s) 1055, 1253
XcmI CCANNNNNNNNNTGG 2 cut(s) 34, 184
XmiI GTMKAC 1 cut(s) 621
XspI CTAG 3 cut(s) 149, 344, 588
Zsp2I ATGCAT 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.