Rorug06G0486000

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000163
Physical Location & Seq
Reverse (-)
60518959 .. 60521785
2827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0486000.1

Sequence Viewer

Length: 1626 bp
ATGAGTTACCATAAGTCGCATGCTTGCTCAATTACACTTCTACCCCAACTGAATATCTACATTTACAGGTATCCAGCTCCTACGCTCAGCGCATCGAAGAATCATTCGTTCTTCTCCACGAATCTACCAACCTCAATCCAACACTTCAACTGTTCCTTACACAACTCTTCCGCCTCTCAAATCTCCCACCAGTTTTTAGTTCCCCAAATTCGCCCTGAAAATCAACCCAAATTTGCAATCATGGAAGACCCAAAACTCAACATTGAGGAATTGAACGGCTCAATGTCCTTCTCCGATTTCCCCGAGGACGTCCAGCTCTGCATCCTCTCCTTCCTGACCCCACCGGAGATCTCCAGCTTCGCCTGCACCTCGAAACGGTTCGTTTCGCTCTGCAAGAACGACGCCAAGCTCTGGTTCTCTATGTGCGACCGCCGCTGGGGCGCCAAGACCCAGATCAAGAAATGGGGTAGCGGCAAAATCACGTACCGGAGCCTCTACCAGACCCTGAGCCGGTGGGAGAATCTGATCGGATTCTGGCGCCAAGGCGGTCAGGCCACTTCTCCGCCGTTGATTTTCTTCGAGTGGGGCCCTTCGTTCCTGACCGGGTCACGTGTCTCTCCCGCCAAGGACGGCAGCTACGGCGTGGTCAAGGCGCCGTTCTTGTGGATGAGCCTCTCGCCGGAGGGCCAGGTTGTTAACTTTCTCGACCCGGAAGGGCGGGCGGAGATTTCGGCGGCGGAGTTAAACTCCGGCCGGCCGAATTTCTCCGATAAGGATTTGGTGCCGGTGAATTTGAGCTTGATGGGGAAGACTCATTTTGTGGTGGAGGAAGATATGAGCTTTGCCGCTAACAGAAATGGAGGTCGGCCAAGTTCGAGTGCAGTGAGTATTATTGAAGGTGGGATTGGTGAGGATTTGATTGGATACGAGAGTGGGTCCCCCGGGACGTCGCCGAACTCGCCGGACCGGATGATGTCGGAGATTTATCAGTACTTTGCGAACCGGACGAGCCCCGGTTCCGGTGGAGATAGAGCGTCAAGGAGGCAGAGGAGGAGAGAGAAGGAGAAGCAGTTGAGGAGGAAGTTGGAGTCTCAGCATTTTGTTAAGATTGTTGATTGCTCGCCGACGCCGGCTCGGCCTTTGCAGGGCCTCTGGAAGGGAATTTATGATGATATGAACTTGGGATTTTACCTTGTTGCATATGATGACATTGGGGGCATTTCCTGCCAAAAGGTTTGTGACTCGTCTGGTCACATTTGCAGTTTCACTCGGGTTATCAGTAAGCTCCCAGTCTTTTGGACAACAGACCCTACTTTTTCCGAGTCTCCATTTCTCCCAGAGGAAGAAAGTTTATATAATAGTCGCATACATCTTCGACCAAATGCCGTAGCAGATCACATTCTCCAGCTCACAGGAATTGAAGTGGTCTCTCGCATTCTTTGCATTACCTTAAGTTATGATATGGCCATTCCATACATGGTAAGAACTACCACAAACCCAGTGCATGCACAGGGAAGGGTTTGGCAGTACGGGGATGGAACATTTGGATTTGGGTTTCTTCAAGACAGTTTTATCAGGGACTTGAAGCAAGTTGCCAAGAATGATTGTCTTCTTGATATTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

541

Amino Acids

60.7

Weight (kDa)

7.92

Isoelectric Point (pI)

66.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 97 - 135 5.6e-07 F-box domain
F-box-like PF12937 98 - 143 1e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 312, 950
AccB1I GGYRCC 4 cut(s) 440, 537, 652, 781
AccB7I CCANNNNNTGG 1 cut(s) 411
AcoI YGGCCR 4 cut(s) 751, 755, 866, 1464
AcsI RAATTY 5 cut(s) 207, 230, 760, 790, 1161
AcvI CACGTG 1 cut(s) 611
AcyI GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
AfaI GTAC 3 cut(s) 485, 992, 1529
AfiI CCNNNNNNNGG 8 cut(s) 375, 411, 436, 510, 679, 1019, 1145, 1156
AflII CTTAAG 1 cut(s) 1450
AflIII ACRYGT 1 cut(s) 610
AgsI TTSAA 6 cut(s) 148, 274, 896, 1421, 1562, 1585
AjnI CCWGG 1 cut(s) 687
AjuI GAANNNNNNNTTGG 4 cut(s) 398, 430, 888, 920
AluBI AGCT 9 cut(s) 77, 316, 357, 409, 636, 798, 840, 1285, 1408
AluI AGCT 9 cut(s) 77, 316, 357, 409, 636, 798, 840, 1285, 1408
Alw26I GTCTC 4 cut(s) 619, 1095, 1329, 1432
AlwNI CAGNNNCTG 1 cut(s) 505
Ama87I CYCGRG 3 cut(s) 302, 941, 1269
AoxI GGCC 9 cut(s) 552, 586, 685, 751, 755, 866, 1136, 1147, 1464
ApaI GGGCCC 1 cut(s) 590
ApeKI GCWGC 1 cut(s) 633
ApoI RAATTY 5 cut(s) 207, 230, 760, 790, 1161
Asp700I GAANNNNTTC 1 cut(s) 377
AspLEI GCGC 4 cut(s) 92, 443, 540, 655
AspS9I GGNCC 6 cut(s) 586, 587, 685, 936, 964, 1147
AsuC2I CCSGG 5 cut(s) 604, 710, 942, 943, 1014
AsuHPI GGTGA 2 cut(s) 799, 920
AvaI CYCGRG 3 cut(s) 302, 941, 1269
AvaII GGWCC 2 cut(s) 936, 964
BaeGI GKGCMC 1 cut(s) 590
BaeI ACNNNNGTAYC 2 cut(s) 916, 949
BalI TGGCCA 1 cut(s) 1466
BanI GGYRCC 4 cut(s) 440, 537, 652, 781
BanII GRGCYC 2 cut(s) 590, 1013
BbrPI CACGTG 1 cut(s) 611
BbsI GAAGAC 3 cut(s) 252, 815, 1601
BbvI GCAGC 1 cut(s) 645
BccI CCATC 2 cut(s) 796, 1529
BceAI ACGGC 6 cut(s) 292, 550, 640, 646, 655, 1370
BciT130I CCWGG 1 cut(s) 689
BciVI GTATCC 2 cut(s) 81, 917
BcnI CCSGG 5 cut(s) 604, 710, 942, 943, 1014
BcoDI GTCTC 4 cut(s) 619, 1095, 1329, 1432
BfoI RGCGCY 3 cut(s) 444, 541, 656
BfrI CTTAAG 1 cut(s) 1450
BfuI GTATCC 2 cut(s) 81, 917
BglI GCCNNNNNGGC 2 cut(s) 438, 1135
BglII AGATCT 1 cut(s) 348
BisI GCNGC 5 cut(s) 433, 472, 634, 735, 846
BlpI GCTNAGC 1 cut(s) 86
BlsI GCNGC 5 cut(s) 434, 473, 635, 736, 847
BmcAI AGTACT 1 cut(s) 992
Bme1390I CCNGG 6 cut(s) 604, 689, 710, 942, 943, 1014
Bme18I GGWCC 2 cut(s) 936, 964
BmeT110I CYCGRG 3 cut(s) 302, 941, 1269
BmgT120I GGNCC 6 cut(s) 586, 587, 685, 936, 964, 1147
BmrFI CCNGG 6 cut(s) 604, 689, 710, 942, 943, 1014
BmrI ACTGGG 2 cut(s) 1283, 1493
BmsI GCATC 2 cut(s) 101, 330
BmuI ACTGGG 2 cut(s) 1283, 1493
BpiI GAAGAC 3 cut(s) 252, 815, 1601
BplI GAGNNNNNCTC 2 cut(s) 731, 763
BpmI CTGGAG 2 cut(s) 337, 1388
Bpu10I CCTNAGC 1 cut(s) 506
Bpu1102I GCTNAGC 1 cut(s) 86
BpuMI CCSGG 5 cut(s) 604, 710, 942, 943, 1014
BsaAI YACGTR 2 cut(s) 483, 611
BsaHI GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
BsaI GGTCTC 1 cut(s) 1432
BsaJI CCNNGG 6 cut(s) 303, 541, 624, 940, 941, 1012
BsaWI WCCGGW 5 cut(s) 343, 486, 966, 1002, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 1055, 1085
Bsc4I CCNNNNNNNGG 8 cut(s) 375, 411, 436, 510, 679, 1019, 1145, 1156
Bse118I RCCGGY 4 cut(s) 510, 753, 784, 1129
Bse1I ACTGG 3 cut(s) 190, 1289, 1499
BseBI CCWGG 1 cut(s) 689
BseDI CCNNGG 6 cut(s) 303, 541, 624, 940, 941, 1012
BseGI GGATG 4 cut(s) 321, 672, 975, 1540
BseLI CCNNNNNNNGG 8 cut(s) 375, 411, 436, 510, 679, 1019, 1145, 1156
BseMII CTCAG 3 cut(s) 100, 497, 1106
BseNI ACTGG 3 cut(s) 190, 1289, 1499
BseRI GAGGAG 3 cut(s) 1063, 1066, 1090
BseSI GKGCMC 1 cut(s) 590
BseX3I CGGCCG 2 cut(s) 751, 755
BseXI GCAGC 1 cut(s) 645
BseYI CCCAGC 1 cut(s) 435
BsgI GTGCAG 2 cut(s) 349, 900
Bsh1285I CGRYCG 3 cut(s) 430, 754, 758
BshFI GGCC 9 cut(s) 554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BshNI GGYRCC 4 cut(s) 440, 537, 652, 781
BsiEI CGRYCG 3 cut(s) 430, 754, 758
BsiHKCI CYCGRG 3 cut(s) 302, 941, 1269
BslFI GGGAC 3 cut(s) 922, 958, 1592
BslI CCNNNNNNNGG 8 cut(s) 375, 411, 436, 510, 679, 1019, 1145, 1156
BsmAI GTCTC 4 cut(s) 619, 1095, 1329, 1432
BsmFI GGGAC 3 cut(s) 922, 958, 1592
BsmI GAATGC 1 cut(s) 1434
BsnI GGCC 9 cut(s) 554, 588, 687, 753, 757, 868, 1138, 1149, 1466
Bso31I GGTCTC 1 cut(s) 1432
BsoBI CYCGRG 3 cut(s) 302, 941, 1269
Bsp120I GGGCCC 1 cut(s) 586
Bsp1286I GDGCHC 2 cut(s) 590, 1013
Bsp143I GATC 4 cut(s) 348, 453, 525, 1393
Bsp1720I GCTNAGC 1 cut(s) 86
BspANI GGCC 9 cut(s) 554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BspCNI CTCAG 3 cut(s) 99, 498, 1105
BspT107I GGYRCC 4 cut(s) 440, 537, 652, 781
BspTI CTTAAG 1 cut(s) 1450
BspTNI GGTCTC 1 cut(s) 1432
BsrFI RCCGGY 4 cut(s) 510, 753, 784, 1129
BsrI ACTGG 3 cut(s) 190, 1289, 1499
BssAI RCCGGY 4 cut(s) 510, 753, 784, 1129
BssECI CCNNGG 6 cut(s) 303, 541, 624, 940, 941, 1012
BssMI GATC 4 cut(s) 348, 453, 525, 1393
BssNI GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
BssT1I CCWWGG 2 cut(s) 541, 624
Bst2UI CCWGG 1 cut(s) 689
Bst4CI ACNGT 3 cut(s) 152, 378, 1568
Bst6I CTCTTC 1 cut(s) 172
BstACI GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
BstAFI CTTAAG 1 cut(s) 1450
BstAPI GCANNNNNTGC 2 cut(s) 1224, 1440
BstBAI YACGTR 2 cut(s) 483, 611
BstC8I GCNNGC 8 cut(s) 21, 25, 364, 720, 755, 1121, 1131, 1506
BstDEI CTNAG 3 cut(s) 86, 506, 1092
BstENI CCTNNNNNAGG 1 cut(s) 1154
BstF5I GGATG 4 cut(s) 321, 672, 975, 1540
BstH2I RGCGCY 3 cut(s) 444, 541, 656
BstHHI GCGC 4 cut(s) 92, 443, 540, 655
BstKTI GATC 4 cut(s) 351, 456, 528, 1396
BstMAI GTCTC 4 cut(s) 619, 1095, 1329, 1432
BstMBI GATC 4 cut(s) 348, 453, 525, 1393
BstMCI CGRYCG 3 cut(s) 430, 754, 758
BstMWI GCNNNNNNNGC 8 cut(s) 363, 432, 438, 639, 958, 1135, 1224, 1440
BstNI CCWGG 1 cut(s) 689
BstNSI RCATGY 2 cut(s) 23, 1508
BstSCI CCNGG 6 cut(s) 602, 687, 708, 940, 941, 1012
BstSLI GKGCMC 1 cut(s) 590
BstV1I GCAGC 1 cut(s) 645
BstV2I GAAGAC 3 cut(s) 252, 815, 1601
BstX2I RGATCY 1 cut(s) 348
BstXI CCANNNNNNTGG 1 cut(s) 1296
BstYI RGATCY 1 cut(s) 348
BstZI CGGCCG 2 cut(s) 751, 755
BsuI GTATCC 2 cut(s) 81, 917
BsuRI GGCC 9 cut(s) 554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BtsCI GGATG 4 cut(s) 321, 672, 975, 1540
BtsI GCAGTG 1 cut(s) 888
BtsIMutI CAGTG 2 cut(s) 888, 1506
Cac8I GCNNGC 8 cut(s) 21, 25, 364, 720, 755, 1121, 1131, 1506
CaiI CAGNNNCTG 1 cut(s) 505
CfoI GCGC 4 cut(s) 92, 443, 540, 655
Cfr10I RCCGGY 4 cut(s) 510, 753, 784, 1129
Cfr13I GGNCC 6 cut(s) 586, 587, 685, 936, 964, 1147
Cfr9I CCCGGG 1 cut(s) 941
CpoI CGGWCCG 1 cut(s) 964
CseI GACGC 3 cut(s) 410, 1023, 1135
Csp6I GTAC 3 cut(s) 484, 991, 1528
CspI CGGWCCG 1 cut(s) 964
CviAII CATG 4 cut(s) 20, 241, 1477, 1505
CviQI GTAC 3 cut(s) 484, 991, 1528
DdeI CTNAG 3 cut(s) 86, 506, 1092
DinI GGCGCC 3 cut(s) 442, 539, 654
DpnI GATC 4 cut(s) 350, 455, 527, 1395
DpnII GATC 4 cut(s) 348, 453, 525, 1393
EaeI YGGCCR 4 cut(s) 751, 755, 866, 1464
EagI CGGCCG 2 cut(s) 751, 755
Eam1104I CTCTTC 1 cut(s) 172
EarI CTCTTC 1 cut(s) 172
EciI GGCGGA 4 cut(s) 160, 552, 737, 752
EclXI CGGCCG 2 cut(s) 751, 755
Eco130I CCWWGG 2 cut(s) 541, 624
Eco24I GRGCYC 2 cut(s) 590, 1013
Eco31I GGTCTC 1 cut(s) 1432
Eco47I GGWCC 2 cut(s) 936, 964
Eco52I CGGCCG 2 cut(s) 751, 755
Eco72I CACGTG 1 cut(s) 611
Eco88I CYCGRG 3 cut(s) 302, 941, 1269
EcoNI CCTNNNNNAGG 1 cut(s) 1154
EcoO109I RGGNCCY 4 cut(s) 586, 587, 936, 1147
EcoRII CCWGG 1 cut(s) 687
EcoT14I CCWWGG 2 cut(s) 541, 624
EcoT38I GRGCYC 2 cut(s) 590, 1013
EgeI GGCGCC 3 cut(s) 442, 539, 654
EheI GGCGCC 3 cut(s) 442, 539, 654
ErhI CCWWGG 2 cut(s) 541, 624
FaeI CATG 4 cut(s) 23, 244, 1480, 1508
FaqI GGGAC 3 cut(s) 922, 958, 1592
FatI CATG 4 cut(s) 19, 240, 1476, 1504
FauI CCCGC 2 cut(s) 628, 711
FauNDI CATATG 1 cut(s) 1201
Fnu4HI GCNGC 5 cut(s) 433, 472, 634, 735, 846
FokI GGATG 4 cut(s) 308, 679, 982, 1547
FriOI GRGCYC 2 cut(s) 590, 1013
FseI GGCCGGCC 1 cut(s) 757
Fsp4HI GCNGC 5 cut(s) 433, 472, 634, 735, 846
GlaI GCGC 4 cut(s) 91, 442, 539, 654
GluI GCNGC 5 cut(s) 433, 472, 634, 735, 846
GsaI CCCAGC 1 cut(s) 439
GsuI CTGGAG 2 cut(s) 337, 1388
HaeII RGCGCY 3 cut(s) 444, 541, 656
HaeIII GGCC 9 cut(s) 554, 588, 687, 753, 757, 868, 1138, 1149, 1466
HgaI GACGC 3 cut(s) 410, 1023, 1135
HhaI GCGC 4 cut(s) 92, 443, 540, 655
Hin1I GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
Hin1II CATG 4 cut(s) 23, 244, 1480, 1508
Hin6I GCGC 4 cut(s) 90, 441, 538, 653
HinP1I GCGC 4 cut(s) 90, 441, 538, 653
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HinfI GANTC 8 cut(s) 100, 121, 520, 531, 811, 1088, 1241, 1322
HpaI GTTAAC 1 cut(s) 697
HphI GGTGA 2 cut(s) 799, 920
Hpy166II GTNNAC 1 cut(s) 697
Hpy188I TCNGA 6 cut(s) 295, 525, 530, 769, 979, 1321
Hpy188III TCNNGA 7 cut(s) 334, 457, 598, 704, 1153, 1562, 1613
Hpy8I GTNNAC 1 cut(s) 697
Hpy99I CGWCG 3 cut(s) 404, 952, 1129
HpyAV CCTTC 8 cut(s) 298, 340, 600, 707, 890, 1054, 1150, 1509
HpyCH4III ACNGT 3 cut(s) 152, 378, 1568
HpyCH4IV ACGT 4 cut(s) 309, 482, 610, 947
HpyF10VI GCNNNNNNNGC 8 cut(s) 363, 432, 438, 639, 958, 1135, 1224, 1440
HpyF3I CTNAG 3 cut(s) 86, 506, 1092
HpySE526I ACGT 4 cut(s) 309, 482, 610, 947
Hsp92I GRCGYC 7 cut(s) 309, 402, 441, 538, 653, 947, 1127
Hsp92II CATG 4 cut(s) 23, 244, 1480, 1508
HspAI GCGC 4 cut(s) 90, 441, 538, 653
KasI GGCGCC 3 cut(s) 440, 537, 652
KflI GGGWCCC 1 cut(s) 936
KroI GCCGGC 2 cut(s) 753, 1129
KroNI GCCGGC 2 cut(s) 755, 1131
KspAI GTTAAC 1 cut(s) 697
Kzo9I GATC 4 cut(s) 348, 453, 525, 1393
LmnI GCTCC 3 cut(s) 82, 489, 1290
Lsp1109I GCAGC 1 cut(s) 645
LweI GCATC 2 cut(s) 101, 330
MaeII ACGT 4 cut(s) 309, 482, 610, 947
MaeIII GTNAC 4 cut(s) 5, 606, 1238, 1250
MalI GATC 4 cut(s) 350, 455, 527, 1395
MboI GATC 4 cut(s) 348, 453, 525, 1393
MflI RGATCY 1 cut(s) 348
MhlI GDGCHC 2 cut(s) 590, 1013
MlsI TGGCCA 1 cut(s) 1466
MluCI AATT 8 cut(s) 30, 207, 230, 269, 760, 790, 1161, 1416
MluNI TGGCCA 1 cut(s) 1466
Mly113I GGCGCC 3 cut(s) 441, 538, 653
MlyI GAGTC 4 cut(s) 805, 1097, 1235, 1331
MmeI TCCRAC 3 cut(s) 163, 957, 1065
Mox20I TGGCCA 1 cut(s) 1466
MroNI GCCGGC 2 cut(s) 753, 1129
MroXI GAANNNNTTC 1 cut(s) 377
MscI TGGCCA 1 cut(s) 1466
MseI TTAA 4 cut(s) 696, 743, 1104, 1451
Msp20I TGGCCA 1 cut(s) 1466
MspA1I CMGCKG 1 cut(s) 435
MspCI CTTAAG 1 cut(s) 1450
MspR9I CCNGG 6 cut(s) 604, 689, 710, 942, 943, 1014
Mva1269I GAATGC 1 cut(s) 1434
MvaI CCWGG 1 cut(s) 689
MwoI GCNNNNNNNGC 8 cut(s) 363, 432, 438, 639, 958, 1135, 1224, 1440
NaeI GCCGGC 2 cut(s) 755, 1131
NarI GGCGCC 3 cut(s) 441, 538, 653
NciI CCSGG 5 cut(s) 604, 710, 942, 943, 1014
NdeI CATATG 1 cut(s) 1201
NdeII GATC 4 cut(s) 348, 453, 525, 1393
NgoMIV GCCGGC 2 cut(s) 753, 1129
NlaIII CATG 4 cut(s) 23, 244, 1480, 1508
NmeAIII GCCGAG 1 cut(s) 1114
NmuCI GTSAC 3 cut(s) 606, 1238, 1250
NspI RCATGY 2 cut(s) 23, 1508
PaeI GCATGC 2 cut(s) 23, 1508
PctI GAATGC 1 cut(s) 1434
PdiI GCCGGC 2 cut(s) 755, 1131
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 4 cut(s) 100, 121, 520, 531
PflFI GACNNNGTC 1 cut(s) 604
PflMI CCANNNNNTGG 1 cut(s) 411
PkrI GCNGC 5 cut(s) 434, 473, 635, 736, 847
PleI GAGTC 4 cut(s) 805, 1096, 1235, 1330
PluTI GGCGCC 3 cut(s) 444, 541, 656
PmaCI CACGTG 1 cut(s) 611
PmlI CACGTG 1 cut(s) 611
PpsI GAGTC 4 cut(s) 805, 1096, 1235, 1330
Ppu21I YACGTR 2 cut(s) 483, 611
PpuMI RGGWCCY 1 cut(s) 936
Psp5II RGGWCCY 1 cut(s) 936
Psp6I CCWGG 1 cut(s) 687
PspCI CACGTG 1 cut(s) 611
PspFI CCCAGC 1 cut(s) 435
PspGI CCWGG 1 cut(s) 687
PspOMI GGGCCC 1 cut(s) 586
PspPI GGNCC 6 cut(s) 586, 587, 685, 936, 964, 1147
PspPPI RGGWCCY 1 cut(s) 936
PstNI CAGNNNCTG 1 cut(s) 505
PsuI RGATCY 1 cut(s) 348
PsyI GACNNNGTC 1 cut(s) 604
RigI GGCCGGCC 1 cut(s) 757
RsaI GTAC 3 cut(s) 485, 992, 1529
RsaNI GTAC 3 cut(s) 484, 991, 1528
Rsr2I CGGWCCG 1 cut(s) 964
RsrII CGGWCCG 1 cut(s) 964
SaqAI TTAA 4 cut(s) 696, 743, 1104, 1451
SatI GCNGC 5 cut(s) 433, 472, 634, 735, 846
Sau3AI GATC 4 cut(s) 348, 453, 525, 1393
Sau96I GGNCC 6 cut(s) 586, 587, 685, 936, 964, 1147
ScaI AGTACT 1 cut(s) 992
SchI GAGTC 4 cut(s) 805, 1097, 1235, 1331
ScrFI CCNGG 6 cut(s) 604, 689, 710, 942, 943, 1014
SduI GDGCHC 2 cut(s) 590, 1013
SfaNI GCATC 2 cut(s) 101, 330
SfoI GGCGCC 3 cut(s) 442, 539, 654
SinI GGWCC 2 cut(s) 936, 964
SmaI CCCGGG 1 cut(s) 943
SmlI CTYRAG 1 cut(s) 1450
SmoI CTYRAG 1 cut(s) 1450
SphI GCATGC 2 cut(s) 23, 1508
Sse9I AATT 8 cut(s) 30, 207, 230, 269, 760, 790, 1161, 1416
SspDI GGCGCC 3 cut(s) 440, 537, 652
StyD4I CCNGG 6 cut(s) 602, 687, 708, 940, 941, 1012
StyI CCWWGG 2 cut(s) 541, 624
TaaI ACNGT 3 cut(s) 152, 378, 1568
TaiI ACGT 4 cut(s) 312, 485, 613, 950
TaqI TCGA 6 cut(s) 95, 371, 579, 705, 875, 1375
TasI AATT 8 cut(s) 30, 207, 230, 269, 760, 790, 1161, 1416
TatI WGTACW 1 cut(s) 990
TauI GCSGC 4 cut(s) 435, 474, 737, 848
TfiI GAWTC 4 cut(s) 100, 121, 520, 531
Tru1I TTAA 4 cut(s) 696, 743, 1104, 1451
Tru9I TTAA 4 cut(s) 696, 743, 1104, 1451
TscAI CASTG 2 cut(s) 888, 1506
TseFI GTSAC 3 cut(s) 606, 1238, 1250
TseI GCWGC 1 cut(s) 633
Tsp45I GTSAC 3 cut(s) 606, 1238, 1250
TspDTI ATGAA 1 cut(s) 1190
TspMI CCCGGG 1 cut(s) 941
TspRI CASTG 2 cut(s) 888, 1506
Tth111I GACNNNGTC 1 cut(s) 604
Van91I CCANNNNNTGG 1 cut(s) 411
Vha464I CTTAAG 1 cut(s) 1450
VpaK11BI GGWCC 2 cut(s) 936, 964
XagI CCTNNNNNAGG 1 cut(s) 1154
XapI RAATTY 5 cut(s) 207, 230, 760, 790, 1161
XceI RCATGY 2 cut(s) 23, 1508
XcmI CCANNNNNNNNNTGG 1 cut(s) 1474
XmaI CCCGGG 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 377
ZraI GACGTC 2 cut(s) 310, 948
ZrmI AGTACT 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.