Rorug07G0107400

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
8389621 .. 8392383
2763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0107400.1

Sequence Viewer

Length: 1620 bp
ATGGCTTCATCAACAGAGTTTTCCTATGTTCTCATTGTGGTTTTTGCGATGGCTTCCATAGCCTGCTGGCCTGTCGAGGCTAATTTGGACGGCCTGGTTCCAACTGCGGAGTATTTGACAATAGGCGGATTGACTTTCGGATTGAATTTAAGCAGTCCATCATATCTCGAAGAACTGAATGTTACAAAATCAGACTTCCCAACTGATTTCGCTTTTGGAGTTGGTACCTCTGCTGGACAGGTTGAAGGGGCAGCGAGAGAATTTGGGAGAGGACCAAGTACATGGGATCATCGCGTTGATACACTCCCTGGTAGTATTCACAACAGCGACAATTTTTCTACAGCAATTGATTCATATAGACGATACAAGGAAGATATTCAGATTATGAAGGACCTCGGAGTAGATTCTTACCGGTTCTCCATCTCTTGGAGTAGGATTTTACCAAATGGAAGCTTAAGTGGCGGAATTAACCAGCAGGGTGTTGATCACTATAACAGTTTGATTGACGAATTGATAAAAAATGGTATCAAACCTTTCGTGACGATTTTGCACTTTGACTTACCACAAGCTCTGGAAGAGAAATATGGTGGTTACTTGAATCGCTCTTTTGTGAATGATTTTAAAGACTACAGTGAACTTTGCTTCAAATTATTTGGAGATAGAGTTAAGAATTGGTTCACAATTAATGAGCCATCAATTCCTGCTGTATACGGGTATGAAGTCGGGATTGCCCCACCCGGGAAGTGTTCACTTCAGGATGATATTTGTCCATGCAAATTTGGTGGTAATTCATCCACAGATCCTTACATTGCAGCCCACAACCAGATACTTGCTCATGCCACTGCAGCAAAGCTTTACAAAGAGAAATACCAAGCACAGCAAAATGGTGAAATTGGAATCGTCCTTGTTTCTAGATACTATGTGCCTTTTTCAGAATCGCAGGAAGATAAAGCTGCAGCGGAAAGACTCTTCGAGTTCACCCTAGGATGGTTTATGGATCCATTTGTGTACGGAGATTACCCAAAGAGTATGAAAGAGTTGGTGAAAGAAAGACTGCCTACATTTTCTCCGGAAGAGAAAATTTTGATCAAGGGAAGTCTAGATTTTGTTGGAATCAATTACTACATATCAACTTATGCTAGACATAAGGCACCATCTAAGGAATTGCGCTACAGTAATGATGTGTCAGCCGAAGAAATAGGTATCAAAAATGGATTTTTTCTGGGCTTGGACCCTAGAGGGCATTGGCCAGAAGGCTTTCAGAAACTGATGGAGCATATAAAGGAAAAGTATCAAAACCCGAAAATCTACATCACCGAAAATGGACTTAGTACTGAAAGAAATGATGCCCTTGGACTTGCTGATCAATTGAAGGATCCGGAAAGAATTGCGTACATTGTTCGTCATTTGTATCGTCTCAATAAGGCAATCAAGAATGGAGTAAACGTGAAAGGGTACTTCTGCTGGGCGCTATTCGACGATTTTGAATGGGGCATGGGATTTCTGGATAGATTTGGTCTATACCATATCGATTTGATTCACAATTACAAACGCATGCCTAAGCTTTCTGCTACATGGTTCAAAGCTTTCCTTCAAAGCAATGTGAACCGAACTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

539

Amino Acids

61.05

Weight (kDa)

5.73

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 63 - 534 5.3e-147 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 224
AccB1I GGYRCC 2 cut(s) 224, 1150
AccB7I CCANNNNNTGG 1 cut(s) 426
AccI GTMKAC 1 cut(s) 708
AccII CGCG 1 cut(s) 294
AccIII TCCGGA 2 cut(s) 1069, 1378
AciI CCGC 4 cut(s) 107, 126, 462, 959
AclWI GGATC 6 cut(s) 294, 794, 992, 1005, 1370, 1383
AcoI YGGCCR 1 cut(s) 1247
AcsI RAATTY 4 cut(s) 145, 260, 776, 1080
AcuI CTGAAG 1 cut(s) 737
AfaI GTAC 6 cut(s) 226, 280, 1010, 1333, 1394, 1457
AfiI CCNNNNNNNGG 3 cut(s) 426, 738, 987
AflII CTTAAG 1 cut(s) 454
AgeI ACCGGT 1 cut(s) 411
AgsI TTSAA 8 cut(s) 145, 245, 598, 646, 1372, 1487, 1582, 1595
AjnI CCWGG 2 cut(s) 93, 307
AluBI AGCT 7 cut(s) 453, 569, 853, 953, 1564, 1586, 1617
AluI AGCT 7 cut(s) 453, 569, 853, 953, 1564, 1586, 1617
Alw26I GTCTC 1 cut(s) 1421
AlwI GGATC 6 cut(s) 294, 794, 992, 1005, 1370, 1383
AlwNI CAGNNNCTG 1 cut(s) 1267
Ama87I CYCGRG 1 cut(s) 737
Aor13HI TCCGGA 2 cut(s) 1069, 1378
AoxI GGCC 3 cut(s) 68, 91, 1247
ApeKI GCWGC 5 cut(s) 251, 812, 845, 953, 956
ApoI RAATTY 4 cut(s) 145, 260, 776, 1080
AseI ATTAAT 1 cut(s) 684
AsiGI ACCGGT 1 cut(s) 411
Asp700I GAANNNNTTC 3 cut(s) 375, 674, 1257
Asp718I GGTACC 1 cut(s) 224
AspA2I CCTAGG 1 cut(s) 982
AspLEI GCGC 2 cut(s) 1170, 1471
AspS9I GGNCC 3 cut(s) 272, 391, 1231
AsuC2I CCSGG 2 cut(s) 738, 739
AsuHPI GGTGA 4 cut(s) 899, 970, 1054, 1306
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 3 cut(s) 272, 391, 1231
AvrII CCTAGG 1 cut(s) 982
BalI TGGCCA 1 cut(s) 1249
BamHI GGATCC 2 cut(s) 997, 1375
BanI GGYRCC 2 cut(s) 224, 1150
BbvI GCAGC 5 cut(s) 263, 824, 857, 940, 968
BccI CCATC 7 cut(s) 43, 166, 428, 700, 981, 1162, 1264
BceAI ACGGC 1 cut(s) 106
BciT130I CCWGG 2 cut(s) 95, 309
BclI TGATCA 3 cut(s) 484, 1086, 1363
BcnI CCSGG 2 cut(s) 738, 739
BcoDI GTCTC 1 cut(s) 1421
BfaI CTAG 6 cut(s) 912, 983, 1100, 1140, 1236, 1614
BfmI CTRYAG 5 cut(s) 339, 628, 843, 954, 1171
BfoI RGCGCY 1 cut(s) 1472
BfrI CTTAAG 1 cut(s) 454
BisI GCNGC 5 cut(s) 252, 813, 846, 954, 957
BlnI CCTAGG 1 cut(s) 982
BlsI GCNGC 5 cut(s) 253, 814, 847, 955, 958
BmcAI AGTACT 1 cut(s) 1333
Bme1390I CCNGG 4 cut(s) 95, 309, 738, 739
Bme18I GGWCC 3 cut(s) 272, 391, 1231
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 3 cut(s) 272, 391, 1231
BmiI GGNNCC 6 cut(s) 99, 226, 999, 1152, 1233, 1377
BmrFI CCNGG 4 cut(s) 95, 309, 738, 739
BmsI GCATC 1 cut(s) 1336
Bpu10I CCTNAGC 1 cut(s) 1560
BpuMI CCSGG 2 cut(s) 738, 739
Bsa29I ATCGAT 1 cut(s) 1530
BsaJI CCNNGG 5 cut(s) 307, 394, 737, 982, 1351
BsaWI WCCGGW 3 cut(s) 411, 1069, 1378
BsaXI ACNNNNNCTCC 8 cut(s) 401, 431, 648, 678, 1051, 1081, 1431, 1461
Bsc4I CCNNNNNNNGG 3 cut(s) 426, 738, 987
Bse118I RCCGGY 1 cut(s) 411
Bse3DI GCAATG 2 cut(s) 807, 1606
BseAI TCCGGA 2 cut(s) 1069, 1378
BseBI CCWGG 2 cut(s) 95, 309
BseCI ATCGAT 1 cut(s) 1530
BseDI CCNNGG 5 cut(s) 307, 394, 737, 982, 1351
BseGI GGATG 3 cut(s) 763, 791, 992
BseLI CCNNNNNNNGG 3 cut(s) 426, 738, 987
BseMI GCAATG 2 cut(s) 807, 1606
BseXI GCAGC 5 cut(s) 263, 824, 857, 940, 968
BseYI CCCAGC 1 cut(s) 1464
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 3 cut(s) 70, 93, 1249
BshNI GGYRCC 2 cut(s) 224, 1150
BshTI ACCGGT 1 cut(s) 411
BshVI ATCGAT 1 cut(s) 1530
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 4 cut(s) 412, 738, 1070, 1379
BslI CCNNNNNNNGG 3 cut(s) 426, 738, 987
BsmAI GTCTC 1 cut(s) 1421
BsmBI CGTCTC 1 cut(s) 1421
BsnI GGCC 3 cut(s) 70, 93, 1249
BsoBI CYCGRG 1 cut(s) 737
Bsp13I TCCGGA 2 cut(s) 1069, 1378
Bsp143I GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
BspACI CCGC 4 cut(s) 107, 126, 462, 959
BspANI GGCC 3 cut(s) 70, 93, 1249
BspDI ATCGAT 1 cut(s) 1530
BspEI TCCGGA 2 cut(s) 1069, 1378
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 6 cut(s) 99, 226, 999, 1152, 1233, 1377
BspMAI CTGCAG 2 cut(s) 847, 958
BspPI GGATC 6 cut(s) 294, 794, 992, 1005, 1370, 1383
BspT107I GGYRCC 2 cut(s) 224, 1150
BspTI CTTAAG 1 cut(s) 454
BsrDI GCAATG 2 cut(s) 807, 1606
BsrFI RCCGGY 1 cut(s) 411
BssAI RCCGGY 1 cut(s) 411
BssECI CCNNGG 5 cut(s) 307, 394, 737, 982, 1351
BssMI GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
BssNAI GTATAC 1 cut(s) 709
BssT1I CCWWGG 2 cut(s) 982, 1351
Bst1107I GTATAC 1 cut(s) 709
Bst2UI CCWGG 2 cut(s) 95, 309
Bst4CI ACNGT 3 cut(s) 497, 632, 1175
Bst6I CTCTTC 3 cut(s) 570, 974, 1068
BstAFI CTTAAG 1 cut(s) 454
BstC8I GCNNGC 3 cut(s) 64, 68, 1556
BstDEI CTNAG 3 cut(s) 1158, 1328, 1560
BstF5I GGATG 3 cut(s) 763, 791, 992
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 1 cut(s) 1472
BstHHI GCGC 2 cut(s) 1170, 1471
BstKTI GATC 7 cut(s) 289, 487, 802, 1000, 1089, 1366, 1378
BstMAI GTCTC 1 cut(s) 1421
BstMBI GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
BstMWI GCNNNNNNNGC 3 cut(s) 59, 459, 845
BstNI CCWGG 2 cut(s) 95, 309
BstNSI RCATGY 1 cut(s) 1558
BstSCI CCNGG 4 cut(s) 93, 307, 736, 737
BstSFI CTRYAG 5 cut(s) 339, 628, 843, 954, 1171
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 5 cut(s) 263, 824, 857, 940, 968
BstX2I RGATCY 3 cut(s) 799, 997, 1375
BstXI CCANNNNNNTGG 1 cut(s) 282
BstYI RGATCY 3 cut(s) 799, 997, 1375
BstZ17I GTATAC 1 cut(s) 709
Bsu15I ATCGAT 1 cut(s) 1530
BsuRI GGCC 3 cut(s) 70, 93, 1249
BsuTUI ATCGAT 1 cut(s) 1530
BtgZI GCGATG 2 cut(s) 62, 275
BtsCI GGATG 3 cut(s) 763, 791, 992
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 2 cut(s) 637, 840
Cac8I GCNNGC 3 cut(s) 64, 68, 1556
CaiI CAGNNNCTG 1 cut(s) 1267
CfoI GCGC 2 cut(s) 1170, 1471
Cfr10I RCCGGY 1 cut(s) 411
Cfr13I GGNCC 3 cut(s) 272, 391, 1231
Cfr9I CCCGGG 1 cut(s) 737
ClaI ATCGAT 1 cut(s) 1530
Csp6I GTAC 6 cut(s) 225, 279, 1009, 1332, 1393, 1456
CspAI ACCGGT 1 cut(s) 411
CspCI CAANNNNNGTGG 2 cut(s) 763, 798
CviAII CATG 6 cut(s) 282, 771, 836, 1495, 1555, 1575
CviQI GTAC 6 cut(s) 225, 279, 1009, 1332, 1393, 1456
DdeI CTNAG 3 cut(s) 1158, 1328, 1560
DpnI GATC 7 cut(s) 288, 486, 801, 999, 1088, 1365, 1377
DpnII GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
DraI TTTAAA 1 cut(s) 622
EaeI YGGCCR 1 cut(s) 1247
Eam1104I CTCTTC 3 cut(s) 570, 974, 1068
EarI CTCTTC 3 cut(s) 570, 974, 1068
EciI GGCGGA 2 cut(s) 141, 477
Eco130I CCWWGG 2 cut(s) 982, 1351
Eco47I GGWCC 3 cut(s) 272, 391, 1231
Eco57I CTGAAG 1 cut(s) 737
Eco88I CYCGRG 1 cut(s) 737
EcoO109I RGGNCCY 1 cut(s) 391
EcoRII CCWGG 2 cut(s) 93, 307
EcoT14I CCWWGG 2 cut(s) 982, 1351
ErhI CCWWGG 2 cut(s) 982, 1351
Esp3I CGTCTC 1 cut(s) 1421
FaeI CATG 6 cut(s) 285, 774, 839, 1498, 1558, 1578
FalI AAGNNNNNCTT 2 cut(s) 1575, 1607
FatI CATG 6 cut(s) 281, 770, 835, 1494, 1554, 1574
FbaI TGATCA 3 cut(s) 484, 1086, 1363
FblI GTMKAC 1 cut(s) 708
Fnu4HI GCNGC 5 cut(s) 252, 813, 846, 954, 957
FokI GGATG 3 cut(s) 770, 778, 999
Fsp4HI GCNGC 5 cut(s) 252, 813, 846, 954, 957
FspBI CTAG 6 cut(s) 912, 983, 1100, 1140, 1236, 1614
GlaI GCGC 2 cut(s) 1169, 1470
GluI GCNGC 5 cut(s) 252, 813, 846, 954, 957
GsaI CCCAGC 1 cut(s) 1468
HaeII RGCGCY 1 cut(s) 1472
HaeIII GGCC 3 cut(s) 70, 93, 1249
HapII CCGG 4 cut(s) 412, 738, 1070, 1379
HhaI GCGC 2 cut(s) 1170, 1471
Hin1II CATG 6 cut(s) 285, 774, 839, 1498, 1558, 1578
Hin6I GCGC 2 cut(s) 1168, 1469
HinP1I GCGC 2 cut(s) 1168, 1469
HindIII AAGCTT 4 cut(s) 451, 851, 1562, 1584
HinfI GANTC 8 cut(s) 350, 404, 598, 897, 935, 966, 1113, 1537
HpaII CCGG 4 cut(s) 412, 738, 1070, 1379
HphI GGTGA 4 cut(s) 899, 970, 1054, 1306
Hpy166II GTNNAC 8 cut(s) 635, 678, 709, 749, 978, 1009, 1444, 1606
Hpy188I TCNGA 6 cut(s) 140, 193, 381, 398, 934, 1263
Hpy8I GTNNAC 8 cut(s) 635, 678, 709, 749, 978, 1009, 1444, 1606
Hpy99I CGWCG 1 cut(s) 1481
HpyAV CCTTC 5 cut(s) 239, 382, 1247, 1366, 1601
HpyCH4III ACNGT 3 cut(s) 497, 632, 1175
HpyCH4IV ACGT 1 cut(s) 1446
HpyCH4V TGCA 5 cut(s) 550, 774, 812, 845, 956
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 459, 845
HpyF3I CTNAG 3 cut(s) 1158, 1328, 1560
HpySE526I ACGT 1 cut(s) 1446
Hsp92II CATG 6 cut(s) 285, 774, 839, 1498, 1558, 1578
HspAI GCGC 2 cut(s) 1168, 1469
Kpn2I TCCGGA 2 cut(s) 1069, 1378
KpnI GGTACC 1 cut(s) 228
Ksp22I TGATCA 3 cut(s) 484, 1086, 1363
Kzo9I GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
LmnI GCTCC 1 cut(s) 1273
Lsp1109I GCAGC 5 cut(s) 263, 824, 857, 940, 968
LweI GCATC 1 cut(s) 1336
MaeI CTAG 6 cut(s) 912, 983, 1100, 1140, 1236, 1614
MaeII ACGT 1 cut(s) 1446
MaeIII GTNAC 3 cut(s) 181, 538, 590
MalI GATC 7 cut(s) 288, 486, 801, 999, 1088, 1365, 1377
MboI GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
MboII GAAGA 7 cut(s) 182, 383, 587, 956, 961, 1085, 1205
MfeI CAATTG 2 cut(s) 345, 1367
MflI RGATCY 3 cut(s) 799, 997, 1375
MlsI TGGCCA 1 cut(s) 1249
MluNI TGGCCA 1 cut(s) 1249
MlyI GAGTC 1 cut(s) 960
MmeI TCCRAC 2 cut(s) 125, 1090
MnlI CCTC 5 cut(s) 70, 238, 263, 404, 1232
Mox20I TGGCCA 1 cut(s) 1249
MroI TCCGGA 2 cut(s) 1069, 1378
MroXI GAANNNNTTC 3 cut(s) 375, 674, 1257
MscI TGGCCA 1 cut(s) 1249
MseI TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
Msp20I TGGCCA 1 cut(s) 1249
MspA1I CMGCKG 1 cut(s) 959
MspCI CTTAAG 1 cut(s) 454
MspI CCGG 4 cut(s) 412, 738, 1070, 1379
MspR9I CCNGG 4 cut(s) 95, 309, 738, 739
MunI CAATTG 2 cut(s) 345, 1367
MvaI CCWGG 2 cut(s) 95, 309
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 3 cut(s) 59, 459, 845
NciI CCSGG 2 cut(s) 738, 739
NdeII GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
NlaIII CATG 6 cut(s) 285, 774, 839, 1498, 1558, 1578
NlaIV GGNNCC 6 cut(s) 99, 226, 999, 1152, 1233, 1377
NmuCI GTSAC 1 cut(s) 538
NspI RCATGY 1 cut(s) 1558
PaeI GCATGC 1 cut(s) 1558
PdmI GAANNNNTTC 3 cut(s) 375, 674, 1257
PfeI GAWTC 7 cut(s) 350, 404, 598, 897, 935, 1113, 1537
PflMI CCANNNNNTGG 1 cut(s) 426
PinAI ACCGGT 1 cut(s) 411
PkrI GCNGC 5 cut(s) 253, 814, 847, 955, 958
PleI GAGTC 1 cut(s) 960
PpsI GAGTC 1 cut(s) 960
PpuMI RGGWCCY 1 cut(s) 391
PshBI ATTAAT 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 2 cut(s) 93, 307
PspFI CCCAGC 1 cut(s) 1464
PspGI CCWGG 2 cut(s) 93, 307
PspN4I GGNNCC 6 cut(s) 99, 226, 999, 1152, 1233, 1377
PspPI GGNCC 3 cut(s) 272, 391, 1231
PspPPI RGGWCCY 1 cut(s) 391
PstI CTGCAG 2 cut(s) 847, 958
PstNI CAGNNNCTG 1 cut(s) 1267
PsuI RGATCY 3 cut(s) 799, 997, 1375
RsaI GTAC 6 cut(s) 226, 280, 1010, 1333, 1394, 1457
RsaNI GTAC 6 cut(s) 225, 279, 1009, 1332, 1393, 1456
SaqAI TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
SatI GCNGC 5 cut(s) 252, 813, 846, 954, 957
Sau3AI GATC 7 cut(s) 286, 484, 799, 997, 1086, 1363, 1375
Sau96I GGNCC 3 cut(s) 272, 391, 1231
ScaI AGTACT 1 cut(s) 1333
SchI GAGTC 1 cut(s) 960
ScrFI CCNGG 4 cut(s) 95, 309, 738, 739
SfaNI GCATC 1 cut(s) 1336
SfcI CTRYAG 5 cut(s) 339, 628, 843, 954, 1171
SinI GGWCC 3 cut(s) 272, 391, 1231
SmaI CCCGGG 1 cut(s) 739
SmlI CTYRAG 1 cut(s) 454
SmoI CTYRAG 1 cut(s) 454
SphI GCATGC 1 cut(s) 1558
SsiI CCGC 4 cut(s) 107, 126, 462, 959
SspMI CTAG 6 cut(s) 912, 983, 1100, 1140, 1236, 1614
StyD4I CCNGG 4 cut(s) 93, 307, 736, 737
StyI CCWWGG 2 cut(s) 982, 1351
TaaI ACNGT 3 cut(s) 497, 632, 1175
TaiI ACGT 1 cut(s) 1449
TaqI TCGA 5 cut(s) 75, 168, 972, 1476, 1530
TatI WGTACW 2 cut(s) 278, 1331
TfiI GAWTC 7 cut(s) 350, 404, 598, 897, 935, 1113, 1537
Tru1I TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
Tru9I TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
TscAI CASTG 2 cut(s) 637, 847
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 5 cut(s) 251, 812, 845, 953, 956
Tsp45I GTSAC 1 cut(s) 538
TspDTI ATGAA 5 cut(s) 342, 401, 732, 780, 1046
TspGWI ACGGA 1 cut(s) 1026
TspMI CCCGGG 1 cut(s) 737
TspRI CASTG 2 cut(s) 637, 847
Van91I CCANNNNNTGG 1 cut(s) 426
Vha464I CTTAAG 1 cut(s) 454
VpaK11BI GGWCC 3 cut(s) 272, 391, 1231
VspI ATTAAT 1 cut(s) 684
XapI RAATTY 4 cut(s) 145, 260, 776, 1080
XbaI TCTAGA 2 cut(s) 911, 1099
XceI RCATGY 1 cut(s) 1558
XmaI CCCGGG 1 cut(s) 737
XmaJI CCTAGG 1 cut(s) 982
XmiI GTMKAC 1 cut(s) 708
XmnI GAANNNNTTC 3 cut(s) 375, 674, 1257
XspI CTAG 6 cut(s) 912, 983, 1100, 1140, 1236, 1614
ZrmI AGTACT 1 cut(s) 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.