RchiOBHm_Chr5g0015501

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000163
Physical Location & Seq
Reverse (-)
10759596 .. 10760709
1114 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29592

Sequence Viewer

Length: 1047 bp
ATGGATCTCGAAGAATCCATCAGCAACCAAACTGACGTCGGACTGGAGATAACGAAGCAACTGCTCCAAACTGAGTTCAAAGATAAGAACATGGTGTACTCCCCAGTATCTATCCACATCGTGCTGAGTCTAATAGCAGCTGGGAAAACTACTTCCGATCTGGACCAGTTTCTGTCTTTCCTCAAGTCCAAGTCCGTCGATGACCTCAACTCCCTCGCCTACATTCTCGTAACTTCCATTTTGGTGGATGCATCCAGCCGCGGCGGGCCATGTTTGAACTTCGCCAATGGTCTCTGGGTCGACGAGTCTCTCCCACTGGATCATTCTTACGAGAAGGTTCTGTCCACTTCCTATAAGGCGGCTCTAAACCACGTCGATTTCAAATCCAACCCCGAGGGAGTGAGAACCCAAGTGAATTCCTGGATCAACAAGGAGACCAATGGCCTTATCCCTGAGATTCTTTCTCCGCACTCAGTCACCACCCTAACGAGTCGTATCTTCGCAAACGCCTTATACTTCAAAGCAACTTGGGACGATGAGTACTTTGACGCATCAAGAACCAGAAAAGGTGAGTTTCACCTTCTGAACGGGGATTTAGTTAAGGGAGTGCGTTTCATGACCAGCCGTCATCGCCACTCGATAAGTGCCTATGATGGTTTTAAAGTCTTGAGTCTTCCTTACAAACCAAGTCGAGATTACAAGGACATGCGAGGTTTTTATATGCACTTGCTTCTTCCAGATGCAAGAGATGGGCTGCCAGCTCTGGCCGAGAGGGTTTTTAGATCGTTTGAGGCCTCCAGTGTTATGGAGAAACTAGGGCTGCCGGCTAATGCCATGGTGATGATGCATGAAGCCTTGATTGAAGTTGATGAAAATGGCACAACAGCTGCAGCTGCTACTGTTGCCCAGTCATACAGGGCTCTTGCTCCGCCGCCTGAAGTGAAAGAAGAAGACTTTGTGGCTGACCACCCATTCATGTTTCTCATTGAAGAAGGTCGTGGAACGATGCTGTTCATGGGGCATGTGCTCAATCCACTTGCTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

348

Amino Acids

38.76

Weight (kDa)

5.39

Isoelectric Point (pI)

35.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 9 - 260 1.6e-47 Serpin (serine protease inhibitor)
Serpin PF00079 281 - 345 2.2e-14 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 39
AccB7I CCANNNNNTGG 1 cut(s) 1040
AccI GTMKAC 1 cut(s) 300
AccII CGCG 1 cut(s) 261
AciI CCGC 7 cut(s) 259, 261, 264, 359, 467, 929, 932
AclWI GGATC 3 cut(s) 12, 327, 431
AcoI YGGCCR 1 cut(s) 765
AcsI RAATTY 1 cut(s) 415
AcuI CTGAAG 1 cut(s) 957
AcyI GRCGYC 1 cut(s) 36
AdeI CACNNNGTG 1 cut(s) 121
AfaI GTAC 2 cut(s) 98, 542
AfiI CCNNNNNNNGG 1 cut(s) 1040
AgsI TTSAA 6 cut(s) 79, 277, 382, 520, 863, 989
AhdI GACNNNNNGTC 1 cut(s) 624
AjiI CACGTC 1 cut(s) 373
AjnI CCWGG 1 cut(s) 419
AluBI AGCT 4 cut(s) 140, 761, 887, 893
AluI AGCT 4 cut(s) 140, 761, 887, 893
Alw21I GWGCWC 1 cut(s) 1029
Alw26I GTCTC 3 cut(s) 296, 312, 428
AlwI GGATC 3 cut(s) 12, 327, 431
AlwNI CAGNNNCTG 1 cut(s) 172
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 4 cut(s) 266, 442, 765, 792
ApeKI GCWGC 6 cut(s) 137, 754, 820, 887, 890, 893
ApoI RAATTY 1 cut(s) 415
AspS9I GGNCC 2 cut(s) 163, 266
AsuHPI GGTGA 4 cut(s) 469, 569, 581, 850
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 1 cut(s) 163
BanII GRGCYC 1 cut(s) 922
BbsI GAAGAC 2 cut(s) 665, 957
Bbv12I GWGCWC 1 cut(s) 1029
BbvI GCAGC 6 cut(s) 149, 741, 807, 874, 880, 902
BccI CCATC 3 cut(s) 26, 647, 743
BceAI ACGGC 1 cut(s) 609
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 1 cut(s) 421
BcoDI GTCTC 3 cut(s) 296, 312, 428
BfaI CTAG 1 cut(s) 815
BfmI CTRYAG 1 cut(s) 888
BmcAI AGTACT 1 cut(s) 542
Bme1390I CCNGG 1 cut(s) 421
Bme18I GGWCC 1 cut(s) 163
BmeRI GACNNNNNGTC 1 cut(s) 624
BmeT110I CYCGRG 1 cut(s) 392
BmgBI CACGTC 1 cut(s) 373
BmgT120I GGNCC 2 cut(s) 163, 266
BmrFI CCNGG 1 cut(s) 421
BmrI ACTGGG 2 cut(s) 98, 901
BmsI GCATC 6 cut(s) 238, 260, 560, 730, 834, 996
BmuI ACTGGG 2 cut(s) 98, 901
BpiI GAAGAC 2 cut(s) 665, 957
BpmI CTGGAG 2 cut(s) 65, 781
BpuEI CTTGAG 2 cut(s) 167, 688
BsaHI GRCGYC 1 cut(s) 36
BsaI GGTCTC 2 cut(s) 296, 428
BsaJI CCNNGG 3 cut(s) 259, 393, 834
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 1 cut(s) 1040
Bse118I RCCGGY 1 cut(s) 823
Bse1I ACTGG 6 cut(s) 48, 104, 166, 321, 798, 907
BseBI CCWGG 1 cut(s) 421
BseDI CCNNGG 3 cut(s) 259, 393, 834
BseGI GGATG 2 cut(s) 251, 253
BseLI CCNNNNNNNGG 1 cut(s) 1040
BseMII CTCAG 4 cut(s) 63, 116, 444, 486
BseNI ACTGG 6 cut(s) 48, 104, 166, 321, 798, 907
BseXI GCAGC 6 cut(s) 149, 741, 807, 874, 880, 902
BseYI CCCAGC 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 261
BshFI GGCC 4 cut(s) 268, 444, 767, 794
BsiHKAI GWGCWC 1 cut(s) 1029
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 1 cut(s) 824
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 1 cut(s) 1040
BsmAI GTCTC 3 cut(s) 296, 312, 428
BsmFI GGGAC 1 cut(s) 545
BsnI GGCC 4 cut(s) 268, 444, 767, 794
Bso31I GGTCTC 2 cut(s) 296, 428
BsoBI CYCGRG 1 cut(s) 392
Bsp1286I GDGCHC 2 cut(s) 922, 1029
Bsp143I GATC 5 cut(s) 4, 157, 319, 423, 782
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 7 cut(s) 259, 261, 264, 359, 467, 929, 932
BspANI GGCC 4 cut(s) 268, 444, 767, 794
BspCNI CTCAG 4 cut(s) 64, 117, 445, 485
BspFNI CGCG 1 cut(s) 261
BspHI TCATGA 1 cut(s) 615
BspMAI CTGCAG 1 cut(s) 892
BspPI GGATC 3 cut(s) 12, 327, 431
BspTNI GGTCTC 2 cut(s) 296, 428
BsrFI RCCGGY 1 cut(s) 823
BsrI ACTGG 6 cut(s) 48, 104, 166, 321, 798, 907
BssAI RCCGGY 1 cut(s) 823
BssECI CCNNGG 3 cut(s) 259, 393, 834
BssMI GATC 5 cut(s) 4, 157, 319, 423, 782
BssNI GRCGYC 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 834
Bst2UI CCWGG 1 cut(s) 421
Bst4CI ACNGT 1 cut(s) 901
BstACI GRCGYC 1 cut(s) 36
BstC8I GCNNGC 4 cut(s) 266, 759, 825, 1042
BstDEI CTNAG 4 cut(s) 72, 125, 453, 472
BstDSI CCRYGG 2 cut(s) 259, 834
BstF5I GGATG 2 cut(s) 251, 253
BstFNI CGCG 1 cut(s) 261
BstKTI GATC 5 cut(s) 7, 160, 322, 426, 785
BstMAI GTCTC 3 cut(s) 296, 312, 428
BstMBI GATC 5 cut(s) 4, 157, 319, 423, 782
BstMWI GCNNNNNNNGC 3 cut(s) 630, 893, 902
BstNI CCWGG 1 cut(s) 421
BstNSI RCATGY 2 cut(s) 709, 1025
BstSCI CCNGG 1 cut(s) 419
BstSFI CTRYAG 1 cut(s) 888
BstUI CGCG 1 cut(s) 261
BstV1I GCAGC 6 cut(s) 149, 741, 807, 874, 880, 902
BstV2I GAAGAC 2 cut(s) 665, 957
BstX2I RGATCY 1 cut(s) 4
BstXI CCANNNNNNTGG 2 cut(s) 244, 805
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 4 cut(s) 268, 444, 767, 794
BtgI CCRYGG 2 cut(s) 259, 834
BtgZI GCGATG 1 cut(s) 614
BtrI CACGTC 1 cut(s) 373
BtsCI GGATG 2 cut(s) 251, 253
BtsIMutI CAGTG 2 cut(s) 314, 805
Cac8I GCNNGC 4 cut(s) 266, 759, 825, 1042
CaiI CAGNNNCTG 1 cut(s) 172
CciI TCATGA 1 cut(s) 615
Cfr10I RCCGGY 1 cut(s) 823
Cfr13I GGNCC 2 cut(s) 163, 266
Cfr42I CCGCGG 1 cut(s) 262
CseI GACGC 1 cut(s) 557
Csp6I GTAC 2 cut(s) 97, 541
CviAII CATG 9 cut(s) 91, 270, 616, 706, 835, 848, 976, 1015, 1022
CviQI GTAC 2 cut(s) 97, 541
DdeI CTNAG 4 cut(s) 72, 125, 453, 472
DpnI GATC 5 cut(s) 6, 159, 321, 425, 784
DpnII GATC 5 cut(s) 4, 157, 319, 423, 782
DraI TTTAAA 1 cut(s) 661
DraIII CACNNNGTG 1 cut(s) 121
DriI GACNNNNNGTC 1 cut(s) 624
EaeI YGGCCR 1 cut(s) 765
Eam1105I GACNNNNNGTC 1 cut(s) 624
EciI GGCGGA 1 cut(s) 918
Eco130I CCWWGG 1 cut(s) 834
Eco147I AGGCCT 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 922
Eco31I GGTCTC 2 cut(s) 296, 428
Eco47I GGWCC 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 957
Eco88I CYCGRG 1 cut(s) 392
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 1 cut(s) 419
EcoT14I CCWWGG 1 cut(s) 834
EcoT22I ATGCAT 2 cut(s) 253, 849
EcoT38I GRGCYC 1 cut(s) 922
ErhI CCWWGG 1 cut(s) 834
FaeI CATG 9 cut(s) 94, 273, 619, 709, 838, 851, 979, 1018, 1025
FaqI GGGAC 1 cut(s) 545
FatI CATG 9 cut(s) 90, 269, 615, 705, 834, 847, 975, 1014, 1021
FauI CCCGC 1 cut(s) 257
FblI GTMKAC 1 cut(s) 300
FokI GGATG 2 cut(s) 238, 260
FriOI GRGCYC 1 cut(s) 922
FspBI CTAG 1 cut(s) 815
GsaI CCCAGC 1 cut(s) 144
GsuI CTGGAG 2 cut(s) 65, 781
HaeIII GGCC 4 cut(s) 268, 444, 767, 794
HapII CCGG 1 cut(s) 824
HgaI GACGC 1 cut(s) 557
Hin1I GRCGYC 1 cut(s) 36
Hin1II CATG 9 cut(s) 94, 273, 619, 709, 838, 851, 979, 1018, 1025
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 6 cut(s) 14, 127, 305, 457, 490, 670
HpaII CCGG 1 cut(s) 824
HphI GGTGA 4 cut(s) 469, 569, 581, 850
Hpy166II GTNNAC 3 cut(s) 97, 301, 345
Hpy188I TCNGA 3 cut(s) 41, 157, 585
Hpy188III TCNNGA 7 cut(s) 8, 161, 555, 616, 667, 692, 737
Hpy8I GTNNAC 3 cut(s) 97, 301, 345
Hpy99I CGWCG 4 cut(s) 41, 200, 305, 377
HpyAV CCTTC 3 cut(s) 328, 590, 986
HpyCH4III ACNGT 1 cut(s) 901
HpyCH4IV ACGT 2 cut(s) 36, 372
HpyCH4V TGCA 5 cut(s) 251, 724, 743, 847, 890
HpyF10VI GCNNNNNNNGC 3 cut(s) 630, 893, 902
HpyF3I CTNAG 4 cut(s) 72, 125, 453, 472
HpySE526I ACGT 2 cut(s) 36, 372
Hsp92I GRCGYC 1 cut(s) 36
Hsp92II CATG 9 cut(s) 94, 273, 619, 709, 838, 851, 979, 1018, 1025
KroI GCCGGC 1 cut(s) 823
KroNI GCCGGC 1 cut(s) 825
KspI CCGCGG 1 cut(s) 262
Kzo9I GATC 5 cut(s) 4, 157, 319, 423, 782
LmnI GCTCC 2 cut(s) 69, 931
Lsp1109I GCAGC 6 cut(s) 149, 741, 807, 874, 880, 902
LweI GCATC 6 cut(s) 238, 260, 560, 730, 834, 996
MaeI CTAG 1 cut(s) 815
MaeII ACGT 2 cut(s) 36, 372
MaeIII GTNAC 2 cut(s) 229, 475
MalI GATC 5 cut(s) 6, 159, 321, 425, 784
MboI GATC 5 cut(s) 4, 157, 319, 423, 782
MboII GAAGA 7 cut(s) 23, 490, 665, 725, 959, 962, 1001
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 922, 1029
MluCI AATT 1 cut(s) 415
MlyI GAGTC 4 cut(s) 136, 314, 499, 679
MmeI TCCRAC 2 cut(s) 19, 411
MnlI CCTC 8 cut(s) 191, 215, 224, 388, 704, 765, 784, 805
Mph1103I ATGCAT 2 cut(s) 253, 849
MroNI GCCGGC 1 cut(s) 823
MseI TTAA 2 cut(s) 600, 660
MslI CAYNNNNRTG 2 cut(s) 242, 839
MspA1I CMGCKG 4 cut(s) 140, 261, 887, 893
MspI CCGG 1 cut(s) 824
MspR9I CCNGG 1 cut(s) 421
MvaI CCWGG 1 cut(s) 421
MvnI CGCG 1 cut(s) 261
MwoI GCNNNNNNNGC 3 cut(s) 630, 893, 902
NaeI GCCGGC 1 cut(s) 825
NcoI CCATGG 1 cut(s) 834
NdeII GATC 5 cut(s) 4, 157, 319, 423, 782
NgoMIV GCCGGC 1 cut(s) 823
NlaIII CATG 9 cut(s) 94, 273, 619, 709, 838, 851, 979, 1018, 1025
NmeAIII GCCGAG 1 cut(s) 793
NmuCI GTSAC 1 cut(s) 475
NsiI ATGCAT 2 cut(s) 253, 849
NspI RCATGY 2 cut(s) 709, 1025
PagI TCATGA 1 cut(s) 615
PceI AGGCCT 1 cut(s) 794
PdiI GCCGGC 1 cut(s) 825
PfeI GAWTC 2 cut(s) 14, 457
PflMI CCANNNNNTGG 1 cut(s) 1040
PfoI TCCNGGA 1 cut(s) 419
PleI GAGTC 4 cut(s) 135, 313, 498, 678
PpsI GAGTC 4 cut(s) 135, 313, 498, 678
Psp6I CCWGG 1 cut(s) 419
PspFI CCCAGC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 419
PspPI GGNCC 2 cut(s) 163, 266
PsrI GAACNNNNNNTAC 2 cut(s) 80, 112
PstI CTGCAG 1 cut(s) 892
PstNI CAGNNNCTG 1 cut(s) 172
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 3 cut(s) 140, 887, 893
RsaI GTAC 2 cut(s) 98, 542
RsaNI GTAC 2 cut(s) 97, 541
RseI CAYNNNNRTG 2 cut(s) 242, 839
SacII CCGCGG 1 cut(s) 262
SalI GTCGAC 1 cut(s) 299
SaqAI TTAA 2 cut(s) 600, 660
Sau3AI GATC 5 cut(s) 4, 157, 319, 423, 782
Sau96I GGNCC 2 cut(s) 163, 266
ScaI AGTACT 1 cut(s) 542
SchI GAGTC 4 cut(s) 136, 314, 499, 679
ScrFI CCNGG 1 cut(s) 421
SduI GDGCHC 2 cut(s) 922, 1029
SfaNI GCATC 6 cut(s) 238, 260, 560, 730, 834, 996
SfcI CTRYAG 1 cut(s) 888
Sfr303I CCGCGG 1 cut(s) 262
SgrBI CCGCGG 1 cut(s) 262
SinI GGWCC 1 cut(s) 163
SmiMI CAYNNNNRTG 2 cut(s) 242, 839
SmlI CTYRAG 2 cut(s) 182, 667
SmoI CTYRAG 2 cut(s) 182, 667
Sse9I AATT 1 cut(s) 415
SseBI AGGCCT 1 cut(s) 794
SsiI CCGC 7 cut(s) 259, 261, 264, 359, 467, 929, 932
SspMI CTAG 1 cut(s) 815
StuI AGGCCT 1 cut(s) 794
StyD4I CCNGG 1 cut(s) 419
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 1 cut(s) 901
TaiI ACGT 2 cut(s) 39, 375
TaqI TCGA 6 cut(s) 9, 198, 300, 375, 638, 691
TasI AATT 1 cut(s) 415
TatI WGTACW 2 cut(s) 96, 540
TauI GCSGC 4 cut(s) 261, 264, 362, 934
TfiI GAWTC 2 cut(s) 14, 457
Tru1I TTAA 2 cut(s) 600, 660
Tru9I TTAA 2 cut(s) 600, 660
TscAI CASTG 2 cut(s) 321, 805
TseFI GTSAC 1 cut(s) 475
TseI GCWGC 6 cut(s) 137, 754, 820, 887, 890, 893
Tsp45I GTSAC 1 cut(s) 475
TspDTI ATGAA 5 cut(s) 604, 864, 885, 964, 1003
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 2 cut(s) 321, 805
Van91I CCANNNNNTGG 1 cut(s) 1040
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 1 cut(s) 415
XceI RCATGY 2 cut(s) 709, 1025
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 1 cut(s) 815
ZraI GACGTC 1 cut(s) 37
ZrmI AGTACT 1 cut(s) 542
Zsp2I ATGCAT 2 cut(s) 253, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.