RchiOBHm_Chr7g0208951

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000163
Physical Location & Seq
Reverse (-)
26333524 .. 26335949
2426 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18701

Sequence Viewer

Length: 1425 bp
ATGGCAGCAACCCACTCCCTCCTTGGCCGTTCACAGGCCCTCCGTCCAAATTCTTCCGGCCACCGTCTGCCGGTTTCCTTCCTCGTTCTCTTTCTCACTTTCGTCATTGTATGTATTTCTCTCTTTTGTCCTCTCTCTGATCTGCGTTACCAGAGCCCAAACTCCTATCCTAACACTTTCAACGCCGATGACCATATCAATCCGATCCCGTGGAGTTCAATGAACCAGACCCAGAAAGCCAGAGTTCAAACGTACCTCAGCAACCAGACTGAGGTGGCTTTTACTATCATGAAGCAGCTGTCTTTGACTACTAAAGCCAAGAACAAAAATATGGTGTACTCGCCACTATCCATCCACATGGTTCTCAGCCTTTTAGCGGCCGGGTCAAACGGCCCTACACAGGACCAGTTGCTCACCTTCCTCAGGTCCAAGTCCACCCAAGAGCTCAACTATCTAGCCTCCACTCTCATGCCTCTGTTCTTCGCGAAAGAATCACCAAATGGCGGGCCTAGCTTGTCATTCACCAATGGCGCTTGGGTAGACAAGTCTCTTCCCGTCAAGCCTTCTTTCAAACGGATAGTGGACACTGCTTACAGGGCTGCCTTAAAGCAAGTCGATTTCAAGGGCAAGTCAGATGAAGTTAGAATGGAAGTGAATTCATGGGCCGAGAAGGAGACTAATGGTCGCATCAAAGATATTCTTGCTTCTGGCTCAGTTGACAGCCTAACGAGACTCATTCTCGCAAATGCATTATACTTCAAAGGAGATTGGAAGGACAGATTTGACGCATTAGGAACAAAAGAGTATGATTTTCACCTTCTCAATGGGAACTCAGTTAAGGCTCCTTTTATGACAGAGTGGATAACAAGTTGGGGAAGGCGGTATATAAGTGTTTTTGACAGTTTCAAAGTTTTGAAACTCCCTTACAAACAAGGTGAAGATCGTGAGAAGTGTTTCTCCATGTATGTCTTCCTTCCGAATGAAAGAGATGGGTTGCCAGCTTTAGTTGAGAGATTTTCTTCCGAGTCTGGGTTCTTAGATCGGCATCTTCCTCGCAAAACAGTTGAAGTTGGTGCCTTTAAAATGCCAAAGTTCACGTATTCTTGTAGATTTGAAGCTTCCAAAGTTCTGAAAACTTTAGGGTTGGAGTTGCCTTTTGTTCCTGGAGGTTTGACAGAGATGGTGGACTCACCTATGATTGATAGCCTATATGTTTCCCACATACAACATGGATCATTCATTGATGTTAATGAGGACGGTACAGAAGCTGCTGCTGTTACGGTTGCTGTTCAAACGGGTTCAACTTGGAGTCAGGAGAAGAGGATAGACTTTGTGGCAGATCATCCCTTCCTTTTTCTTATCAGAGAAGAAACCACTGGATCGGTGCTGTTCATTGGGCAAGTCCTCAATCCAATTGAAAACTGA

Protein Analysis

474

Amino Acids

53.2

Weight (kDa)

8.46

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 88 - 471 3.6e-93 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1073
AccI GTMKAC 1 cut(s) 540
AccII CGCG 1 cut(s) 485
AciI CCGC 3 cut(s) 377, 504, 880
AclWI GGATC 3 cut(s) 199, 1240, 1387
AcoI YGGCCR 3 cut(s) 25, 58, 378
AcsI RAATTY 2 cut(s) 49, 655
AfaI GTAC 3 cut(s) 254, 338, 1261
AfiI CCNNNNNNNGG 8 cut(s) 34, 70, 271, 376, 400, 423, 503, 1029
AhdI GACNNNNNGTC 1 cut(s) 681
AjnI CCWGG 1 cut(s) 1162
AluBI AGCT 6 cut(s) 298, 445, 513, 1001, 1118, 1268
AluI AGCT 6 cut(s) 298, 445, 513, 1001, 1118, 1268
Alw21I GWGCWC 1 cut(s) 447
Alw26I GTCTC 3 cut(s) 552, 668, 724
AlwI GGATC 3 cut(s) 199, 1240, 1387
AlwNI CAGNNNCTG 1 cut(s) 1268
AoxI GGCC 7 cut(s) 25, 36, 58, 378, 391, 506, 663
ApeKI GCWGC 5 cut(s) 5, 295, 599, 1268, 1271
ApoI RAATTY 2 cut(s) 49, 655
Asp700I GAANNNNTTC 1 cut(s) 953
AspLEI GCGC 1 cut(s) 533
AspS9I GGNCC 6 cut(s) 37, 392, 403, 426, 506, 663
AsuC2I CCSGG 1 cut(s) 382
AsuHPI GGTGA 6 cut(s) 406, 486, 514, 806, 947, 1182
AvaII GGWCC 2 cut(s) 403, 426
AxyI CCTNAGG 1 cut(s) 422
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 2 cut(s) 158, 447
BbsI GAAGAC 1 cut(s) 961
Bbv12I GWGCWC 1 cut(s) 447
BbvCI CCTCAGC 1 cut(s) 257
BbvI GCAGC 5 cut(s) 17, 307, 586, 1255, 1258
BccI CCATC 3 cut(s) 359, 983, 1174
BceAI ACGGC 2 cut(s) 12, 406
BcgI CGANNNNNNTGC 2 cut(s) 1034, 1068
BciT130I CCWGG 1 cut(s) 1164
BcnI CCSGG 1 cut(s) 382
BcoDI GTCTC 3 cut(s) 552, 668, 724
BfaI CTAG 2 cut(s) 455, 510
BfoI RGCGCY 1 cut(s) 534
BisI GCNGC 6 cut(s) 6, 296, 378, 600, 1269, 1272
BlsI GCNGC 6 cut(s) 7, 297, 379, 601, 1270, 1273
Bme1390I CCNGG 2 cut(s) 382, 1164
Bme18I GGWCC 2 cut(s) 403, 426
BmeRI GACNNNNNGTC 1 cut(s) 681
BmgT120I GGNCC 6 cut(s) 37, 392, 403, 426, 506, 663
BmiI GGNNCC 2 cut(s) 843, 1075
BmrFI CCNGG 2 cut(s) 382, 1164
BmsI GCATC 2 cut(s) 696, 1054
BpiI GAAGAC 1 cut(s) 961
BpmI CTGGAG 1 cut(s) 1185
Bpu10I CCTNAGC 1 cut(s) 257
BpuMI CCSGG 1 cut(s) 382
BsaAI YACGTR 1 cut(s) 1098
BsaBI GATNNNNATC 1 cut(s) 1044
BsaJI CCNNGG 2 cut(s) 22, 209
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 8 cut(s) 34, 70, 271, 376, 400, 423, 503, 1029
Bse118I RCCGGY 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 406, 1381
Bse21I CCTNAGG 1 cut(s) 422
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 1 cut(s) 1164
BseDI CCNNGG 2 cut(s) 22, 209
BseGI GGATG 2 cut(s) 351, 1342
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 8 cut(s) 34, 70, 271, 376, 400, 423, 503, 1029
BseMII CTCAG 6 cut(s) 261, 271, 379, 436, 726, 846
BseNI ACTGG 2 cut(s) 406, 1381
BseX3I CGGCCG 1 cut(s) 378
BseXI GCAGC 5 cut(s) 17, 307, 586, 1255, 1258
Bsh1236I CGCG 1 cut(s) 485
Bsh1285I CGRYCG 1 cut(s) 381
BshFI GGCC 7 cut(s) 27, 38, 60, 380, 393, 508, 665
BshNI GGYRCC 1 cut(s) 1073
BsiEI CGRYCG 1 cut(s) 381
BsiHKAI GWGCWC 1 cut(s) 447
BsiSI CCGG 3 cut(s) 57, 71, 381
BslI CCNNNNNNNGG 8 cut(s) 34, 70, 271, 376, 400, 423, 503, 1029
BsmAI GTCTC 3 cut(s) 552, 668, 724
BsnI GGCC 7 cut(s) 27, 38, 60, 380, 393, 508, 665
Bsp1286I GDGCHC 2 cut(s) 158, 447
Bsp143I GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
Bsp68I TCGCGA 1 cut(s) 485
BspACI CCGC 3 cut(s) 377, 504, 880
BspANI GGCC 7 cut(s) 27, 38, 60, 380, 393, 508, 665
BspCNI CTCAG 6 cut(s) 262, 270, 378, 435, 725, 845
BspFNI CGCG 1 cut(s) 485
BspHI TCATGA 1 cut(s) 288
BspLI GGNNCC 2 cut(s) 843, 1075
BspPI GGATC 3 cut(s) 199, 1240, 1387
BspT107I GGYRCC 1 cut(s) 1073
BsrFI RCCGGY 1 cut(s) 70
BsrI ACTGG 2 cut(s) 406, 1381
BssAI RCCGGY 1 cut(s) 70
BssECI CCNNGG 2 cut(s) 22, 209
BssMI GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
BssT1I CCWWGG 1 cut(s) 22
Bst2UI CCWGG 1 cut(s) 1164
Bst4CI ACNGT 5 cut(s) 65, 902, 1063, 1259, 1282
Bst6I CTCTTC 2 cut(s) 555, 1313
BstBAI YACGTR 1 cut(s) 1098
BstC8I GCNNGC 2 cut(s) 506, 999
BstDEI CTNAG 7 cut(s) 257, 270, 365, 422, 712, 832, 1036
BstDSI CCRYGG 1 cut(s) 209
BstENI CCTNNNNNAGG 1 cut(s) 421
BstF5I GGATG 2 cut(s) 351, 1342
BstFNI CGCG 1 cut(s) 485
BstH2I RGCGCY 1 cut(s) 534
BstHHI GCGC 1 cut(s) 533
BstKTI GATC 7 cut(s) 142, 207, 943, 1042, 1235, 1342, 1382
BstMAI GTCTC 3 cut(s) 552, 668, 724
BstMBI GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 2 cut(s) 510, 596
BstNI CCWGG 1 cut(s) 1164
BstSCI CCNGG 2 cut(s) 380, 1162
BstUI CGCG 1 cut(s) 485
BstV1I GCAGC 5 cut(s) 17, 307, 586, 1255, 1258
BstV2I GAAGAC 1 cut(s) 961
BstXI CCANNNNNNTGG 1 cut(s) 358
BstZI CGGCCG 1 cut(s) 378
Bsu36I CCTNAGG 1 cut(s) 422
BsuRI GGCC 7 cut(s) 27, 38, 60, 380, 393, 508, 665
BtgI CCRYGG 1 cut(s) 209
BtsCI GGATG 2 cut(s) 351, 1342
BtsI GCAGTG 1 cut(s) 585
BtsIMutI CAGTG 2 cut(s) 585, 1374
BtuMI TCGCGA 1 cut(s) 485
Cac8I GCNNGC 2 cut(s) 506, 999
CaiI CAGNNNCTG 1 cut(s) 1268
CciI TCATGA 1 cut(s) 288
CfoI GCGC 1 cut(s) 533
Cfr10I RCCGGY 1 cut(s) 70
Cfr13I GGNCC 6 cut(s) 37, 392, 403, 426, 506, 663
CseI GACGC 1 cut(s) 794
Csp6I GTAC 3 cut(s) 253, 337, 1260
CviAII CATG 6 cut(s) 289, 358, 469, 660, 961, 1229
CviQI GTAC 3 cut(s) 253, 337, 1260
DdeI CTNAG 7 cut(s) 257, 270, 365, 422, 712, 832, 1036
DpnI GATC 7 cut(s) 141, 206, 942, 1041, 1234, 1341, 1381
DpnII GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
DraI TTTAAA 1 cut(s) 1081
DriI GACNNNNNGTC 1 cut(s) 681
EaeI YGGCCR 3 cut(s) 25, 58, 378
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 2 cut(s) 555, 1313
Eam1105I GACNNNNNGTC 1 cut(s) 681
EarI CTCTTC 2 cut(s) 555, 1313
Ecl136II GAGCTC 1 cut(s) 445
EclXI CGGCCG 1 cut(s) 378
Eco130I CCWWGG 1 cut(s) 22
Eco24I GRGCYC 2 cut(s) 158, 447
Eco47I GGWCC 2 cut(s) 403, 426
Eco52I CGGCCG 1 cut(s) 378
Eco53kI GAGCTC 1 cut(s) 445
Eco81I CCTNAGG 1 cut(s) 422
EcoICRI GAGCTC 1 cut(s) 445
EcoNI CCTNNNNNAGG 1 cut(s) 421
EcoO109I RGGNCCY 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 655
EcoRII CCWGG 1 cut(s) 1162
EcoT14I CCWWGG 1 cut(s) 22
EcoT22I ATGCAT 1 cut(s) 751
EcoT38I GRGCYC 2 cut(s) 158, 447
ErhI CCWWGG 1 cut(s) 22
FaeI CATG 6 cut(s) 292, 361, 472, 663, 964, 1232
FalI AAGNNNNNCTT 2 cut(s) 684, 716
FatI CATG 6 cut(s) 288, 357, 468, 659, 960, 1228
FauI CCCGC 1 cut(s) 497
FblI GTMKAC 1 cut(s) 540
Fnu4HI GCNGC 6 cut(s) 6, 296, 378, 600, 1269, 1272
FokI GGATG 2 cut(s) 338, 1329
FriOI GRGCYC 2 cut(s) 158, 447
Fsp4HI GCNGC 6 cut(s) 6, 296, 378, 600, 1269, 1272
FspBI CTAG 2 cut(s) 455, 510
GlaI GCGC 1 cut(s) 532
GluI GCNGC 6 cut(s) 6, 296, 378, 600, 1269, 1272
GsuI CTGGAG 1 cut(s) 1185
HaeII RGCGCY 1 cut(s) 534
HaeIII GGCC 7 cut(s) 27, 38, 60, 380, 393, 508, 665
HapII CCGG 3 cut(s) 57, 71, 381
HgaI GACGC 1 cut(s) 794
HhaI GCGC 1 cut(s) 533
Hin1II CATG 6 cut(s) 292, 361, 472, 663, 964, 1232
Hin6I GCGC 1 cut(s) 531
HinP1I GCGC 1 cut(s) 531
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HindIII AAGCTT 1 cut(s) 1116
HinfI GANTC 5 cut(s) 491, 732, 1025, 1187, 1309
HpaII CCGG 3 cut(s) 57, 71, 381
HphI GGTGA 6 cut(s) 406, 486, 514, 806, 947, 1182
Hpy166II GTNNAC 8 cut(s) 32, 337, 435, 541, 583, 718, 1095, 1186
Hpy188I TCNGA 7 cut(s) 139, 204, 634, 978, 1024, 1131, 1364
Hpy188III TCNNGA 4 cut(s) 289, 484, 944, 1313
Hpy8I GTNNAC 8 cut(s) 32, 337, 435, 541, 583, 718, 1095, 1186
HpyAV CCTTC 9 cut(s) 88, 427, 573, 664, 766, 827, 870, 983, 1357
HpyCH4III ACNGT 5 cut(s) 65, 902, 1063, 1259, 1282
HpyCH4IV ACGT 2 cut(s) 251, 1097
HpyCH4V TGCA 1 cut(s) 749
HpyF10VI GCNNNNNNNGC 2 cut(s) 510, 596
HpyF3I CTNAG 7 cut(s) 257, 270, 365, 422, 712, 832, 1036
HpySE526I ACGT 2 cut(s) 251, 1097
Hsp92II CATG 6 cut(s) 292, 361, 472, 663, 964, 1232
HspAI GCGC 1 cut(s) 531
Kzo9I GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
LmnI GCTCC 1 cut(s) 847
Lsp1109I GCAGC 5 cut(s) 17, 307, 586, 1255, 1258
LweI GCATC 2 cut(s) 696, 1054
MaeI CTAG 2 cut(s) 455, 510
MaeII ACGT 2 cut(s) 251, 1097
MaeIII GTNAC 2 cut(s) 146, 1276
MalI GATC 7 cut(s) 141, 206, 942, 1041, 1234, 1341, 1381
MboI GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
MboII GAAGA 9 cut(s) 45, 472, 542, 950, 961, 1011, 1040, 1330, 1379
MfeI CAATTG 1 cut(s) 1413
MhlI GDGCHC 2 cut(s) 158, 447
MluCI AATT 3 cut(s) 49, 655, 1413
MlyI GAGTC 4 cut(s) 726, 1034, 1181, 1318
MmeI TCCRAC 1 cut(s) 1125
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 953
MseI TTAA 4 cut(s) 605, 837, 1080, 1248
MslI CAYNNNNRTG 2 cut(s) 356, 467
MspA1I CMGCKG 1 cut(s) 298
MspI CCGG 3 cut(s) 57, 71, 381
MspR9I CCNGG 2 cut(s) 382, 1164
MunI CAATTG 1 cut(s) 1413
MvaI CCWGG 1 cut(s) 1164
MvnI CGCG 1 cut(s) 485
MwoI GCNNNNNNNGC 2 cut(s) 510, 596
NciI CCSGG 1 cut(s) 382
NdeII GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
NlaIII CATG 6 cut(s) 292, 361, 472, 663, 964, 1232
NlaIV GGNNCC 2 cut(s) 843, 1075
NmeAIII GCCGAG 1 cut(s) 691
NruI TCGCGA 1 cut(s) 485
NsiI ATGCAT 1 cut(s) 751
PagI TCATGA 1 cut(s) 288
PdmI GAANNNNTTC 1 cut(s) 953
PfeI GAWTC 1 cut(s) 491
PfoI TCCNGGA 1 cut(s) 1162
PkrI GCNGC 6 cut(s) 7, 297, 379, 601, 1270, 1273
PleI GAGTC 4 cut(s) 726, 1033, 1181, 1317
PpsI GAGTC 4 cut(s) 726, 1033, 1181, 1317
Ppu21I YACGTR 1 cut(s) 1098
Psp124BI GAGCTC 1 cut(s) 447
Psp6I CCWGG 1 cut(s) 1162
PspGI CCWGG 1 cut(s) 1162
PspN4I GGNNCC 2 cut(s) 843, 1075
PspPI GGNCC 6 cut(s) 37, 392, 403, 426, 506, 663
PstNI CAGNNNCTG 1 cut(s) 1268
PvuII CAGCTG 1 cut(s) 298
RruI TCGCGA 1 cut(s) 485
RsaI GTAC 3 cut(s) 254, 338, 1261
RsaNI GTAC 3 cut(s) 253, 337, 1260
RseI CAYNNNNRTG 2 cut(s) 356, 467
SacI GAGCTC 1 cut(s) 447
SaqAI TTAA 4 cut(s) 605, 837, 1080, 1248
SatI GCNGC 6 cut(s) 6, 296, 378, 600, 1269, 1272
Sau3AI GATC 7 cut(s) 139, 204, 940, 1039, 1232, 1339, 1379
Sau96I GGNCC 6 cut(s) 37, 392, 403, 426, 506, 663
SchI GAGTC 4 cut(s) 726, 1034, 1181, 1318
ScrFI CCNGG 2 cut(s) 382, 1164
SduI GDGCHC 2 cut(s) 158, 447
SfaNI GCATC 2 cut(s) 696, 1054
SinI GGWCC 2 cut(s) 403, 426
SmiMI CAYNNNNRTG 2 cut(s) 356, 467
Sse9I AATT 3 cut(s) 49, 655, 1413
SsiI CCGC 3 cut(s) 377, 504, 880
SspMI CTAG 2 cut(s) 455, 510
SstI GAGCTC 1 cut(s) 447
StyD4I CCNGG 2 cut(s) 380, 1162
StyI CCWWGG 1 cut(s) 22
TaaI ACNGT 5 cut(s) 65, 902, 1063, 1259, 1282
TaiI ACGT 2 cut(s) 254, 1100
TaqI TCGA 1 cut(s) 615
TasI AATT 3 cut(s) 49, 655, 1413
TatI WGTACW 1 cut(s) 336
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 1 cut(s) 491
Tru1I TTAA 4 cut(s) 605, 837, 1080, 1248
Tru9I TTAA 4 cut(s) 605, 837, 1080, 1248
TscAI CASTG 2 cut(s) 592, 1381
TseI GCWGC 5 cut(s) 5, 295, 599, 1268, 1271
TspDTI ATGAA 7 cut(s) 236, 305, 648, 651, 996, 1228, 1381
TspGWI ACGGA 2 cut(s) 32, 589
TspRI CASTG 2 cut(s) 592, 1381
VpaK11BI GGWCC 2 cut(s) 403, 426
XagI CCTNNNNNAGG 1 cut(s) 421
XapI RAATTY 2 cut(s) 49, 655
XcmI CCANNNNNNNNNTGG 2 cut(s) 20, 1226
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 1 cut(s) 953
XspI CTAG 2 cut(s) 455, 510
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.