MD04G1189000.v1.1

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000163
Physical Location & Seq
Reverse (-)
27954745 .. 27956139
1395 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1189000.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGTGTCAAAGTATTTGTTTGTTCGTATCCCAAATCTCCGACGGGGTCATCGATTCATCAGGCATGGCGTCTCCTCTCAAACTAATTTCCTGCTCGCTGTTTTTATTTTTCAGCTTTATTTTCTGGTCCAAGAAGCCGCCGATTCACCCCAACATCATCGCCAAAACCCTAACCACTCCTCCGGTCCAACTTCCAGTGATAGCTAGGGATAGGGATTTGTCAGATTTGAGAATTTTTGTCCGCAGCCAAACAGCTGCCGCTATGAGAATCACAAAGCCTTTGCTTCTGTCCGAAGCTAAGGACAAAAACATGGTGTTCTCTCCGCTGTCCATCCACATCGTTTTGAGCCTGATCGCGGCGGGGACAAAGGGTCCGGCGAGGGACCAGTTACTCTCTTTTCTCAAGTCCAACTCCACCGCCGAACTCAACGCCCTCGCTGCGGATCTAGTTCTATTGGTTTTGGCAGATGGATCTGCCAGTGGCGGTCCCCGTCTGTCCTTTGCCAATGGACTTTGGGTTGATGAGTCTCTCTCTATCAAGCCTTCTTTCAAAGAGGCGGTGGCCGTGTTTTACAAGGCAGTTGCGGACAAAGTCGATTTCCAGAACAAAGCGGATGAGGTGAGAATCAAAGTGAATTCTTGGGCCCAAGGGAAGACTGGTGGCCTGATCAAAGAATTTCTTCCTCCCGCATCAATTAACGGTGCAACAAGGCTCGTGTTTGCAAATGCATTGTACTTCAAAGGGGTTTGGGAGGAGAAGTTTGATGCGTTGAATACCAAAGAGCATGACTTCAACCTCCTCGACGGGAGCTCAGTTCGGGCACACTTCATGACCAGCGACAAGTGGCAGTTTGTAAGGGCGTTTGACGGCTTCAAAATCTTACAGCTTCCTTACCGACAAGGCGGAGAAGAAGAAGGCAAACCTCCTCGGCGACGTTTCTCCATGTACTTGATTCTGCCTGATGCGGAAGACGGACTGCCAGGTTTGGTGGACAAAGTTTGTTCCGGATCTGACTTCTTGAATCGACATCAACCGTACGGTAAAGTTGAAGTGGGCGACTTCAAAATCCCAAGGTTTAAGTTTTCTTCCGACTTGGAAGCGTCCAAAACTCTCAAGGATTTAGGATTGGTGTTGCCTTTTACTAGTGAGTTGACAGAGATGGTTAACTGGCTTCCTTCCGGCGATGCTTTCAATATGCTTCACAAATCCTGCATTGAAGTTAATGAAGAAGGCACTGAAGCGGCAGCTGTTACTGGCATTCTTGCGGGGAGTTCGCTTAATCCTCCTGACAAGATAGATTTTGTGGCCGATCATCCATTCATGTTCGTCATCAGAGAAGAAATTACTGGAACGGTGTTGTTCATTGGGCAAGTGCTGAATCCGCTCGCGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05146 map05146
Pfam Domains
Protein Families
Serpin

Protein Analysis

465

Amino Acids

50.92

Weight (kDa)

6.22

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 83 - 461 1e-87 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1384
AccII CGCG 2 cut(s) 356, 1388
AccIII TCCGGA 1 cut(s) 1004
AclWI GGATC 3 cut(s) 450, 478, 1015
AcoI YGGCCR 2 cut(s) 561, 1305
AcsI RAATTY 3 cut(s) 231, 634, 674
AcuI CTGAAG 1 cut(s) 1257
AcyI GRCGYC 1 cut(s) 68
AfaI GTAC 3 cut(s) 734, 947, 1037
AfiI CCNNNNNNNGG 3 cut(s) 355, 439, 1388
AhdI GACNNNNNGTC 1 cut(s) 369
AhlI ACTAGT 1 cut(s) 1142
AjnI CCWGG 1 cut(s) 979
AluBI AGCT 7 cut(s) 114, 203, 254, 296, 810, 886, 1247
AluI AGCT 7 cut(s) 114, 203, 254, 296, 810, 886, 1247
Alw21I GWGCWC 1 cut(s) 812
Alw26I GTCTC 2 cut(s) 75, 531
AlwI GGATC 3 cut(s) 450, 478, 1015
Aor13HI TCCGGA 1 cut(s) 1004
AoxI GGCC 4 cut(s) 561, 642, 661, 1305
ApaI GGGCCC 1 cut(s) 646
ApeKI GCWGC 4 cut(s) 243, 254, 437, 1244
ApoI RAATTY 3 cut(s) 231, 634, 674
Asp700I GAANNNNTTC 1 cut(s) 678
AspS9I GGNCC 7 cut(s) 126, 184, 371, 382, 485, 642, 643
AsuHPI GGTGA 2 cut(s) 137, 631
AvaII GGWCC 5 cut(s) 126, 184, 371, 382, 485
BaeGI GKGCMC 2 cut(s) 646, 823
BanII GRGCYC 2 cut(s) 646, 812
BauI CACGAG 1 cut(s) 713
BbsI GAAGAC 2 cut(s) 659, 975
Bbv12I GWGCWC 1 cut(s) 812
BbvI GCAGC 4 cut(s) 241, 255, 424, 1256
BccI CCATC 3 cut(s) 338, 461, 1153
BceAI ACGGC 2 cut(s) 548, 883
BciT130I CCWGG 1 cut(s) 981
BciVI GTATCC 1 cut(s) 37
BclI TGATCA 1 cut(s) 666
BcoDI GTCTC 2 cut(s) 75, 531
BcuI ACTAGT 1 cut(s) 1142
BfaI CTAG 3 cut(s) 204, 446, 1143
BfuI GTATCC 1 cut(s) 37
BisI GCNGC 8 cut(s) 137, 244, 255, 258, 357, 438, 1242, 1245
BlsI GCNGC 8 cut(s) 138, 245, 256, 259, 358, 439, 1243, 1246
Bme1390I CCNGG 1 cut(s) 981
Bme18I GGWCC 5 cut(s) 126, 184, 371, 382, 485
BmeRI GACNNNNNGTC 1 cut(s) 369
BmgT120I GGNCC 7 cut(s) 126, 184, 371, 382, 485, 642, 643
BmiI GGNNCC 4 cut(s) 372, 383, 487, 644
BmrFI CCNGG 1 cut(s) 981
BmsI GCATC 4 cut(s) 698, 754, 952, 1174
BpiI GAAGAC 2 cut(s) 659, 975
BplI GAGNNNNNCTC 2 cut(s) 515, 547
Bpu10I CCTNAGC 1 cut(s) 297
BpuEI CTTGAG 2 cut(s) 386, 1097
Bsa29I ATCGAT 1 cut(s) 51
BsaHI GRCGYC 1 cut(s) 68
BsaJI CCNNGG 3 cut(s) 646, 926, 1070
BsaWI WCCGGW 2 cut(s) 181, 1004
BsaXI ACNNNNNCTCC 4 cut(s) 163, 193, 743, 773
Bsc4I CCNNNNNNNGG 3 cut(s) 355, 439, 1388
Bse1I ACTGG 7 cut(s) 194, 385, 477, 661, 1172, 1258, 1351
BseAI TCCGGA 1 cut(s) 1004
BseBI CCWGG 1 cut(s) 981
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 3 cut(s) 646, 926, 1070
BseGI GGATG 3 cut(s) 330, 619, 1312
BseLI CCNNNNNNNGG 3 cut(s) 355, 439, 1388
BseMII CTCAG 1 cut(s) 825
BseNI ACTGG 7 cut(s) 194, 385, 477, 661, 1172, 1258, 1351
BseRI GAGGAG 5 cut(s) 63, 168, 767, 788, 915
BseSI GKGCMC 2 cut(s) 646, 823
BseXI GCAGC 4 cut(s) 241, 255, 424, 1256
Bsh1236I CGCG 2 cut(s) 356, 1388
BshFI GGCC 4 cut(s) 563, 644, 663, 1307
BshVI ATCGAT 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 812
BsiSI CCGG 4 cut(s) 182, 374, 1005, 1179
BsiWI CGTACG 1 cut(s) 1035
BslFI GGGAC 3 cut(s) 376, 395, 471
BslI CCNNNNNNNGG 3 cut(s) 355, 439, 1388
BsmAI GTCTC 2 cut(s) 75, 531
BsmBI CGTCTC 1 cut(s) 75
BsmFI GGGAC 3 cut(s) 376, 395, 471
BsmI GAATGC 1 cut(s) 1257
BsnI GGCC 4 cut(s) 563, 644, 663, 1307
Bsp120I GGGCCC 1 cut(s) 642
Bsp1286I GDGCHC 3 cut(s) 646, 812, 823
Bsp13I TCCGGA 1 cut(s) 1004
Bsp143I GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
BspANI GGCC 4 cut(s) 563, 644, 663, 1307
BspCNI CTCAG 1 cut(s) 824
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 1004
BspFNI CGCG 2 cut(s) 356, 1388
BspHI TCATGA 1 cut(s) 828
BspLI GGNNCC 4 cut(s) 372, 383, 487, 644
BspPI GGATC 3 cut(s) 450, 478, 1015
BsrBI CCGCTC 1 cut(s) 1384
BsrI ACTGG 7 cut(s) 194, 385, 477, 661, 1172, 1258, 1351
BssECI CCNNGG 3 cut(s) 646, 926, 1070
BssMI GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
BssNI GRCGYC 1 cut(s) 68
BssSI CACGAG 1 cut(s) 713
BssT1I CCWWGG 2 cut(s) 646, 1070
Bst2BI CACGAG 1 cut(s) 713
Bst2UI CCWGG 1 cut(s) 981
Bst4CI ACNGT 4 cut(s) 701, 1035, 1040, 1354
BstACI GRCGYC 1 cut(s) 68
BstC8I GCNNGC 2 cut(s) 95, 1386
BstDEI CTNAG 2 cut(s) 297, 811
BstF5I GGATG 3 cut(s) 330, 619, 1312
BstFNI CGCG 2 cut(s) 356, 1388
BstKTI GATC 6 cut(s) 354, 445, 473, 669, 1010, 1312
BstMAI GTCTC 2 cut(s) 75, 531
BstMBI GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
BstMWI GCNNNNNNNGC 2 cut(s) 437, 1381
BstNI CCWGG 1 cut(s) 981
BstSCI CCNGG 1 cut(s) 979
BstSLI GKGCMC 2 cut(s) 646, 823
BstUI CGCG 2 cut(s) 356, 1388
BstV1I GCAGC 4 cut(s) 241, 255, 424, 1256
BstV2I GAAGAC 2 cut(s) 659, 975
BstX2I RGATCY 3 cut(s) 442, 470, 1007
BstYI RGATCY 3 cut(s) 442, 470, 1007
Bsu15I ATCGAT 1 cut(s) 51
BsuI GTATCC 1 cut(s) 37
BsuRI GGCC 4 cut(s) 563, 644, 663, 1307
BsuTUI ATCGAT 1 cut(s) 51
BtgZI GCGATG 2 cut(s) 142, 1197
BtsCI GGATG 3 cut(s) 330, 619, 1312
BtsIMutI CAGTG 3 cut(s) 201, 484, 1233
Cac8I GCNNGC 2 cut(s) 95, 1386
CciI TCATGA 1 cut(s) 828
Cfr13I GGNCC 7 cut(s) 126, 184, 371, 382, 485, 642, 643
ClaI ATCGAT 1 cut(s) 51
CseI GACGC 2 cut(s) 57, 1089
Csp6I GTAC 3 cut(s) 733, 946, 1036
CviAII CATG 6 cut(s) 64, 310, 785, 829, 943, 1321
CviQI GTAC 3 cut(s) 733, 946, 1036
DdeI CTNAG 2 cut(s) 297, 811
DpnI GATC 6 cut(s) 353, 444, 472, 668, 1009, 1311
DpnII GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
DriI GACNNNNNGTC 1 cut(s) 369
EaeI YGGCCR 2 cut(s) 561, 1305
Eam1105I GACNNNNNGTC 1 cut(s) 369
EciI GGCGGA 1 cut(s) 918
Ecl136II GAGCTC 1 cut(s) 810
Eco130I CCWWGG 2 cut(s) 646, 1070
Eco24I GRGCYC 2 cut(s) 646, 812
Eco47I GGWCC 5 cut(s) 126, 184, 371, 382, 485
Eco53kI GAGCTC 1 cut(s) 810
Eco57I CTGAAG 1 cut(s) 1257
EcoICRI GAGCTC 1 cut(s) 810
EcoRI GAATTC 1 cut(s) 634
EcoRII CCWGG 1 cut(s) 979
EcoT14I CCWWGG 2 cut(s) 646, 1070
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 2 cut(s) 646, 812
ErhI CCWWGG 2 cut(s) 646, 1070
Esp3I CGTCTC 1 cut(s) 75
FaeI CATG 6 cut(s) 67, 313, 788, 832, 946, 1324
FaiI YATR 8 cut(s) 65, 263, 311, 786, 830, 944, 1196, 1322
FalI AAGNNNNNCTT 2 cut(s) 663, 695
FaqI GGGAC 3 cut(s) 376, 395, 471
FatI CATG 6 cut(s) 63, 309, 784, 828, 942, 1320
FauI CCCGC 4 cut(s) 352, 694, 1258, 1381
FbaI TGATCA 1 cut(s) 666
Fnu4HI GCNGC 8 cut(s) 137, 244, 255, 258, 357, 438, 1242, 1245
FokI GGATG 3 cut(s) 317, 626, 1299
FriOI GRGCYC 2 cut(s) 646, 812
Fsp4HI GCNGC 8 cut(s) 137, 244, 255, 258, 357, 438, 1242, 1245
FspBI CTAG 3 cut(s) 204, 446, 1143
GluI GCNGC 8 cut(s) 137, 244, 255, 258, 357, 438, 1242, 1245
HaeIII GGCC 4 cut(s) 563, 644, 663, 1307
HapII CCGG 4 cut(s) 182, 374, 1005, 1179
HgaI GACGC 2 cut(s) 57, 1089
Hin1I GRCGYC 1 cut(s) 68
Hin1II CATG 6 cut(s) 67, 313, 788, 832, 946, 1324
HincII GTYRAC 2 cut(s) 1152, 1165
HindII GTYRAC 2 cut(s) 1152, 1165
HinfI GANTC 8 cut(s) 53, 142, 267, 524, 624, 952, 1021, 1378
HpaI GTTAAC 1 cut(s) 1165
HpaII CCGG 4 cut(s) 182, 374, 1005, 1179
HphI GGTGA 2 cut(s) 137, 631
Hpy166II GTNNAC 3 cut(s) 991, 1152, 1165
Hpy188I TCNGA 6 cut(s) 40, 223, 292, 1012, 1090, 1334
Hpy188III TCNNGA 5 cut(s) 601, 829, 1005, 1018, 1286
Hpy8I GTNNAC 3 cut(s) 991, 1152, 1165
Hpy99I CGWCG 3 cut(s) 44, 806, 936
HpyAV CCTTC 4 cut(s) 552, 908, 1185, 1223
HpyCH4III ACNGT 4 cut(s) 701, 1035, 1040, 1354
HpyCH4IV ACGT 1 cut(s) 934
HpyCH4V TGCA 4 cut(s) 704, 722, 728, 1212
HpyF10VI GCNNNNNNNGC 2 cut(s) 437, 1381
HpyF3I CTNAG 2 cut(s) 297, 811
HpySE526I ACGT 1 cut(s) 934
Hsp92I GRCGYC 1 cut(s) 68
Hsp92II CATG 6 cut(s) 67, 313, 788, 832, 946, 1324
Kpn2I TCCGGA 1 cut(s) 1004
Ksp22I TGATCA 1 cut(s) 666
KspAI GTTAAC 1 cut(s) 1165
Kzo9I GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
LmnI GCTCC 1 cut(s) 807
Lsp1109I GCAGC 4 cut(s) 241, 255, 424, 1256
LweI GCATC 4 cut(s) 698, 754, 952, 1174
MaeI CTAG 3 cut(s) 204, 446, 1143
MaeII ACGT 1 cut(s) 934
MaeIII GTNAC 2 cut(s) 387, 1249
MalI GATC 6 cut(s) 353, 444, 472, 668, 1009, 1311
MbiI CCGCTC 1 cut(s) 1384
MboI GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
MboII GAAGA 8 cut(s) 664, 671, 920, 923, 980, 1077, 1238, 1349
MflI RGATCY 3 cut(s) 442, 470, 1007
MhlI GDGCHC 3 cut(s) 646, 812, 823
MluCI AATT 6 cut(s) 84, 231, 634, 674, 693, 1341
MlyI GAGTC 1 cut(s) 533
MmeI TCCRAC 4 cut(s) 63, 211, 432, 1113
Mph1103I ATGCAT 1 cut(s) 730
MroI TCCGGA 1 cut(s) 1004
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 5 cut(s) 696, 1077, 1164, 1221, 1278
MspA1I CMGCKG 3 cut(s) 254, 325, 1247
MspI CCGG 4 cut(s) 182, 374, 1005, 1179
MspR9I CCNGG 1 cut(s) 981
Mva1269I GAATGC 1 cut(s) 1257
MvaI CCWGG 1 cut(s) 981
MvnI CGCG 2 cut(s) 356, 1388
MwoI GCNNNNNNNGC 2 cut(s) 437, 1381
NdeII GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
NlaIII CATG 6 cut(s) 67, 313, 788, 832, 946, 1324
NlaIV GGNNCC 4 cut(s) 372, 383, 487, 644
NmeAIII GCCGAG 1 cut(s) 907
NsiI ATGCAT 1 cut(s) 730
PagI TCATGA 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 1 cut(s) 1257
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 7 cut(s) 53, 142, 267, 624, 952, 1021, 1378
Pfl23II CGTACG 1 cut(s) 1035
PflFI GACNNNGTC 2 cut(s) 44, 590
PkrI GCNGC 8 cut(s) 138, 245, 256, 259, 358, 439, 1243, 1246
PleI GAGTC 1 cut(s) 532
PpsI GAGTC 1 cut(s) 532
Psp124BI GAGCTC 1 cut(s) 812
Psp6I CCWGG 1 cut(s) 979
PspGI CCWGG 1 cut(s) 979
PspLI CGTACG 1 cut(s) 1035
PspN4I GGNNCC 4 cut(s) 372, 383, 487, 644
PspOMI GGGCCC 1 cut(s) 642
PspPI GGNCC 7 cut(s) 126, 184, 371, 382, 485, 642, 643
PsuI RGATCY 3 cut(s) 442, 470, 1007
PsyI GACNNNGTC 2 cut(s) 44, 590
PvuII CAGCTG 2 cut(s) 254, 1247
RsaI GTAC 3 cut(s) 734, 947, 1037
RsaNI GTAC 3 cut(s) 733, 946, 1036
SacI GAGCTC 1 cut(s) 812
SaqAI TTAA 5 cut(s) 696, 1077, 1164, 1221, 1278
SatI GCNGC 8 cut(s) 137, 244, 255, 258, 357, 438, 1242, 1245
Sau3AI GATC 6 cut(s) 351, 442, 470, 666, 1007, 1309
Sau96I GGNCC 7 cut(s) 126, 184, 371, 382, 485, 642, 643
SchI GAGTC 1 cut(s) 533
ScrFI CCNGG 1 cut(s) 981
SduI GDGCHC 3 cut(s) 646, 812, 823
SfaNI GCATC 4 cut(s) 698, 754, 952, 1174
SinI GGWCC 5 cut(s) 126, 184, 371, 382, 485
SmlI CTYRAG 2 cut(s) 401, 1112
SmoI CTYRAG 2 cut(s) 401, 1112
SpeI ACTAGT 1 cut(s) 1142
Sse9I AATT 6 cut(s) 84, 231, 634, 674, 693, 1341
SspMI CTAG 3 cut(s) 204, 446, 1143
SstI GAGCTC 1 cut(s) 812
StyD4I CCNGG 1 cut(s) 979
StyI CCWWGG 2 cut(s) 646, 1070
TaaI ACNGT 4 cut(s) 701, 1035, 1040, 1354
TaiI ACGT 1 cut(s) 937
TaqI TCGA 4 cut(s) 51, 594, 801, 1024
TasI AATT 6 cut(s) 84, 231, 634, 674, 693, 1341
TatI WGTACW 2 cut(s) 732, 945
TauI GCSGC 4 cut(s) 139, 260, 359, 1244
TfiI GAWTC 7 cut(s) 53, 142, 267, 624, 952, 1021, 1378
Tru1I TTAA 5 cut(s) 696, 1077, 1164, 1221, 1278
Tru9I TTAA 5 cut(s) 696, 1077, 1164, 1221, 1278
TscAI CASTG 3 cut(s) 201, 484, 1240
TseI GCWGC 4 cut(s) 243, 254, 437, 1244
TspDTI ATGAA 5 cut(s) 45, 817, 1239, 1309, 1351
TspGWI ACGGA 1 cut(s) 987
TspRI CASTG 3 cut(s) 201, 484, 1240
Tth111I GACNNNGTC 2 cut(s) 44, 590
VpaK11BI GGWCC 5 cut(s) 126, 184, 371, 382, 485
XapI RAATTY 3 cut(s) 231, 634, 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 653
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 3 cut(s) 204, 446, 1143
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.