FvH4_5g21330

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000163
Physical Location & Seq
Forward (+)
12862053 .. 12864485
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g21330.t1

Sequence Viewer

Length: 1626 bp
ATGGACAACAAAGATGATGGTCGCCGTATTTCGTATACTCCCGAGCAATGTACTCCGTATAACCCTAGTTCTCCGGTGTATACTCCTAGTTCTTCGGCCTACACTCCTAGTTCTCCGGGGTATACTCCTACTACTCCGGGTTCTCCGGAGTATAATCCTAGTTTTCCGCAGTATACTCCTTACTCTCCTTACTCTACTGTGTATACTCCTAGTTCTTCGGCCTATTCTCCTACTTCTCCGGGTTCTCCGGAGTATCATCCTAGTTCTCCGCAGTATACTCCTTACCCTCCACCGTATACTCCTTACTCTACAGCTTACATTCCACAAGTATATCACCCTACGCAACAAAATGGAGTCCCTTCGTATATTCCTTCCCCTTCATTGTACTCTCCTTCACGTTACACTGCCGCGGGTCATACGATCATGAATAGTACTCATCCACCGCCTTCCTTCAAACCATCTAAGGAACTCAGAGAATCCATTAAAAACCAGACCGATGTTGCACTGGGAATCACAAAGCACCTGCTTCTGACTTTAGGCAAGGACAAGAACATGGTGTACTCCCCATTGTCCATCCACATTGGTCTTGGCATGATAATGTCTGGGACGAAGGGTCATATCCAGGACCAGTTTCTCTCTTTCTTGAAGTCCAAGTCCATCAACGAGCTCAATGATCTCGCCTCCAATGTCTATCCTCTGGTCTTTGCGGATGGAGAATCAAAGGGCGGGCCTCGCATTTCATTTGCCAATGGTGTTTGGGTTGAAGAGTCTCTCCATGTCAAGCCTTGTTTCAAAGAGGCACTGGACGCCACTTACAAGGGAGCATTGAATCATGTCGACTTTAGAACAAGGGCTGAGGAAGTGCGTTATGAAGTGAATTCATGGGTCGACAAGAAGACCAGTGGCCTTATTAAAGACATTCTATCTCCAGGGTCTGTTAGCAGAAAAACAGATCTCATCCTCGCTAGTGCATTATACTTCAAAGGAGCTTGGAATGAAAAGTTCGATGAATCAATGACAAAAGAATTTGATTTCCATCTCCAGGGTGGGAGTTCAGTGAAGGCACCCTTCATGACAAGTTCAAGATACCAGTTCATAAGTGTCTTTGACAGCTTCAAAGTCTTGAAGCTTCCCTACAAGCATGGTGAAGATTACGATCGTCGTTTCTGTATGTGCGTGTTTCTTCCAAATGAAACAGATGGACTACAAGCTTTGGTTGAGAGGGTTTGTTCCGAGTCTATAGATGGATATATTCCCCGCACATCTGTTCCAGTTGGTAAATTTTTGATCCCAAAGTTTAAGATATCTGCCGAGTTTGATCCTCTCCCTGTTCTGAAACCGTTAGGATTCTCTTTTGAAAATGGGCATTTGACCGAGATGGTGGAGGGTCGTGCTGTTGCTCTCAACATGTTCCAAAAATCTTTTATTGAAGTTAATGAAGAAGGCACTGAGGCTGCTGCTGTTTATATTACACGCGGACCTGGTTACTCATCGGGTATTGATCCACCCAAACCTATTCCTGTAGATTTTGTGGCAGATCACCCGTTCCTTTATCTAATCAGGGAAGACGTGACTGGAACGGTCATGTTCGTTGGGCACGTCCTAAACCCCATTAAAGAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

542

Amino Acids

60.09

Weight (kDa)

6.29

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 163 - 537 2.1e-83 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 531
Acc36I ACCTGC 1 cut(s) 531
AccB1I GGYRCC 1 cut(s) 1063
AccI GTMKAC 9 cut(s) 35, 80, 122, 173, 203, 275, 296, 837, 888
AccII CGCG 2 cut(s) 410, 1476
AccIII TCCGGA 2 cut(s) 145, 247
AciI CCGC 9 cut(s) 167, 269, 408, 410, 443, 707, 726, 1258, 1476
AclWI GGATC 3 cut(s) 1282, 1313, 1496
AcsI RAATTY 3 cut(s) 877, 1025, 1280
AcyI GRCGYC 1 cut(s) 807
AfaI GTAC 4 cut(s) 52, 386, 433, 560
AfiI CCNNNNNNNGG 1 cut(s) 1042
AflIII ACRYGT 1 cut(s) 1407
AhdI GACNNNNNGTC 1 cut(s) 612
AjiI CACGTC 2 cut(s) 1570, 1600
AjnI CCWGG 4 cut(s) 621, 928, 1041, 1480
AluBI AGCT 6 cut(s) 314, 667, 989, 1113, 1129, 1211
AluI AGCT 6 cut(s) 314, 667, 989, 1113, 1129, 1211
Alw21I GWGCWC 1 cut(s) 669
Alw26I GTCTC 1 cut(s) 774
AlwI GGATC 3 cut(s) 1282, 1313, 1496
AlwNI CAGNNNCTG 1 cut(s) 935
Ama87I CYCGRG 1 cut(s) 41
Aor13HI TCCGGA 2 cut(s) 145, 247
AoxI GGCC 4 cut(s) 96, 219, 728, 904
ApeKI GCWGC 2 cut(s) 1454, 1457
ApoI RAATTY 3 cut(s) 877, 1025, 1280
AspS9I GGNCC 3 cut(s) 625, 728, 1478
AsuC2I CCSGG 3 cut(s) 117, 138, 240
AsuHPI GGTGA 3 cut(s) 326, 1157, 1532
AvaI CYCGRG 1 cut(s) 41
AvaII GGWCC 2 cut(s) 625, 1478
BaeGI GKGCMC 1 cut(s) 1599
BanI GGYRCC 1 cut(s) 1063
BanII GRGCYC 1 cut(s) 669
BarI GAAGNNNNNNTAC 2 cut(s) 1118, 1150
BbsI GAAGAC 2 cut(s) 902, 1572
Bbv12I GWGCWC 1 cut(s) 669
BbvCI CCTCAGC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 1441, 1444
BccI CCATC 9 cut(s) 11, 466, 581, 665, 704, 1044, 1193, 1238, 1372
BceAI ACGGC 1 cut(s) 9
BciT130I CCWGG 4 cut(s) 623, 930, 1043, 1482
BcnI CCSGG 3 cut(s) 117, 138, 240
BcoDI GTCTC 1 cut(s) 774
BfaI CTAG 7 cut(s) 66, 87, 108, 159, 210, 261, 966
BfmI CTRYAG 3 cut(s) 309, 1239, 1521
BfuAI ACCTGC 1 cut(s) 531
BglII AGATCT 1 cut(s) 952
BisI GCNGC 3 cut(s) 408, 1455, 1458
BlsI GCNGC 3 cut(s) 409, 1456, 1459
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 7 cut(s) 117, 138, 240, 623, 930, 1043, 1482
Bme18I GGWCC 2 cut(s) 625, 1478
BmeRI GACNNNNNGTC 1 cut(s) 612
BmeT110I CYCGRG 1 cut(s) 41
BmgBI CACGTC 2 cut(s) 1570, 1600
BmgT120I GGNCC 3 cut(s) 625, 728, 1478
BmiI GGNNCC 1 cut(s) 1065
BmrFI CCNGG 7 cut(s) 117, 138, 240, 623, 930, 1043, 1482
BmrI ACTGGG 1 cut(s) 515
BmuI ACTGGG 1 cut(s) 515
BpiI GAAGAC 2 cut(s) 902, 1572
BpmI CTGGAG 2 cut(s) 912, 1025
Bpu10I CCTNAGC 1 cut(s) 855
BpuMI CCSGG 3 cut(s) 117, 138, 240
BsaBI GATNNNNATC 2 cut(s) 1035, 1155
BsaHI GRCGYC 1 cut(s) 807
BsaJI CCNNGG 4 cut(s) 116, 408, 929, 1042
BsaWI WCCGGW 3 cut(s) 73, 145, 247
Bsc4I CCNNNNNNNGG 1 cut(s) 1042
Bse1I ACTGG 7 cut(s) 510, 628, 807, 900, 1090, 1271, 1579
Bse3DI GCAATG 1 cut(s) 53
Bse8I GATNNNNATC 2 cut(s) 1035, 1155
BseAI TCCGGA 2 cut(s) 145, 247
BseBI CCWGG 4 cut(s) 623, 930, 1043, 1482
BseDI CCNNGG 4 cut(s) 116, 408, 929, 1042
BseGI GGATG 5 cut(s) 256, 436, 573, 715, 957
BseJI GATNNNNATC 2 cut(s) 1035, 1155
BseLI CCNNNNNNNGG 1 cut(s) 1042
BseMI GCAATG 1 cut(s) 53
BseMII CTCAG 3 cut(s) 484, 846, 1440
BseNI ACTGG 7 cut(s) 510, 628, 807, 900, 1090, 1271, 1579
BseSI GKGCMC 1 cut(s) 1599
BseXI GCAGC 2 cut(s) 1441, 1444
Bsh1236I CGCG 2 cut(s) 410, 1476
Bsh1285I CGRYCG 1 cut(s) 1159
BshFI GGCC 4 cut(s) 98, 221, 730, 906
BshNI GGYRCC 1 cut(s) 1063
BsiEI CGRYCG 1 cut(s) 1159
BsiHKAI GWGCWC 1 cut(s) 669
BsiHKCI CYCGRG 1 cut(s) 41
BsiSI CCGG 6 cut(s) 74, 116, 137, 146, 239, 248
BslFI GGGAC 2 cut(s) 341, 619
BslI CCNNNNNNNGG 1 cut(s) 1042
BsmAI GTCTC 1 cut(s) 774
BsmFI GGGAC 2 cut(s) 341, 619
BsnI GGCC 4 cut(s) 98, 221, 730, 906
BsoBI CYCGRG 1 cut(s) 41
Bsp1286I GDGCHC 2 cut(s) 669, 1599
Bsp13I TCCGGA 2 cut(s) 145, 247
Bsp143I GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
BspACI CCGC 9 cut(s) 167, 269, 408, 410, 443, 707, 726, 1258, 1476
BspANI GGCC 4 cut(s) 98, 221, 730, 906
BspCNI CTCAG 3 cut(s) 483, 847, 1441
BspEI TCCGGA 2 cut(s) 145, 247
BspFNI CGCG 2 cut(s) 410, 1476
BspHI TCATGA 2 cut(s) 423, 1071
BspLI GGNNCC 1 cut(s) 1065
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 3 cut(s) 1282, 1313, 1496
BspT107I GGYRCC 1 cut(s) 1063
BsrDI GCAATG 1 cut(s) 53
BsrI ACTGG 7 cut(s) 510, 628, 807, 900, 1090, 1271, 1579
BssECI CCNNGG 4 cut(s) 116, 408, 929, 1042
BssMI GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
BssNAI GTATAC 7 cut(s) 36, 81, 123, 174, 204, 276, 297
BssNI GRCGYC 1 cut(s) 807
Bst1107I GTATAC 7 cut(s) 36, 81, 123, 174, 204, 276, 297
Bst2UI CCWGG 4 cut(s) 623, 930, 1043, 1482
Bst4CI ACNGT 4 cut(s) 199, 294, 1341, 1582
Bst6I CTCTTC 1 cut(s) 759
BstACI GRCGYC 1 cut(s) 807
BstC8I GCNNGC 1 cut(s) 728
BstDEI CTNAG 4 cut(s) 462, 470, 855, 1449
BstDSI CCRYGG 1 cut(s) 408
BstF5I GGATG 5 cut(s) 256, 436, 573, 715, 957
BstFNI CGCG 2 cut(s) 410, 1476
BstKTI GATC 8 cut(s) 423, 676, 955, 1159, 1290, 1321, 1504, 1540
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
BstMCI CGRYCG 1 cut(s) 1159
BstMWI GCNNNNNNNGC 2 cut(s) 732, 806
BstNI CCWGG 4 cut(s) 623, 930, 1043, 1482
BstNSI RCATGY 1 cut(s) 1411
BstSCI CCNGG 7 cut(s) 115, 136, 238, 621, 928, 1041, 1480
BstSFI CTRYAG 3 cut(s) 309, 1239, 1521
BstSLI GKGCMC 1 cut(s) 1599
BstUI CGCG 2 cut(s) 410, 1476
BstV1I GCAGC 2 cut(s) 1441, 1444
BstV2I GAAGAC 2 cut(s) 902, 1572
BstX2I RGATCY 1 cut(s) 952
BstYI RGATCY 1 cut(s) 952
BstZ17I GTATAC 7 cut(s) 36, 81, 123, 174, 204, 276, 297
BsuRI GGCC 4 cut(s) 98, 221, 730, 906
BtgI CCRYGG 1 cut(s) 408
BtrI CACGTC 2 cut(s) 1570, 1600
BtsCI GGATG 5 cut(s) 256, 436, 573, 715, 957
BtsI GCAGTG 1 cut(s) 402
BtsIMutI CAGTG 6 cut(s) 402, 503, 800, 907, 1062, 1446
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 1 cut(s) 728
CaiI CAGNNNCTG 1 cut(s) 935
CciI TCATGA 2 cut(s) 423, 1071
Cfr13I GGNCC 3 cut(s) 625, 728, 1478
Cfr42I CCGCGG 1 cut(s) 411
CseI GACGC 1 cut(s) 815
CsiI ACCWGGT 1 cut(s) 1480
Csp6I GTAC 4 cut(s) 51, 385, 432, 559
CviQI GTAC 4 cut(s) 51, 385, 432, 559
DdeI CTNAG 4 cut(s) 462, 470, 855, 1449
DpnI GATC 8 cut(s) 422, 675, 954, 1158, 1289, 1320, 1503, 1539
DpnII GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
DriI GACNNNNNGTC 1 cut(s) 612
Eam1104I CTCTTC 1 cut(s) 759
Eam1105I GACNNNNNGTC 1 cut(s) 612
EarI CTCTTC 1 cut(s) 759
Ecl136II GAGCTC 1 cut(s) 667
Eco24I GRGCYC 1 cut(s) 669
Eco32I GATATC 1 cut(s) 1305
Eco47I GGWCC 2 cut(s) 625, 1478
Eco53kI GAGCTC 1 cut(s) 667
Eco88I CYCGRG 1 cut(s) 41
EcoICRI GAGCTC 1 cut(s) 667
EcoRI GAATTC 1 cut(s) 877
EcoRII CCWGG 4 cut(s) 621, 928, 1041, 1480
EcoRV GATATC 1 cut(s) 1305
EcoT38I GRGCYC 1 cut(s) 669
FalI AAGNNNNNCTT 2 cut(s) 1052, 1084
FaqI GGGAC 2 cut(s) 341, 619
FauI CCCGC 3 cut(s) 403, 719, 1265
FblI GTMKAC 9 cut(s) 35, 80, 122, 173, 203, 275, 296, 837, 888
Fnu4HI GCNGC 3 cut(s) 408, 1455, 1458
FokI GGATG 5 cut(s) 243, 423, 560, 722, 944
FriOI GRGCYC 1 cut(s) 669
Fsp4HI GCNGC 3 cut(s) 408, 1455, 1458
FspBI CTAG 7 cut(s) 66, 87, 108, 159, 210, 261, 966
GluI GCNGC 3 cut(s) 408, 1455, 1458
GsuI CTGGAG 2 cut(s) 912, 1025
HaeIII GGCC 4 cut(s) 98, 221, 730, 906
HapII CCGG 6 cut(s) 74, 116, 137, 146, 239, 248
HgaI GACGC 1 cut(s) 815
Hin1I GRCGYC 1 cut(s) 807
HincII GTYRAC 2 cut(s) 838, 889
HindII GTYRAC 2 cut(s) 838, 889
HindIII AAGCTT 2 cut(s) 1127, 1209
HinfI GANTC 9 cut(s) 354, 476, 510, 716, 767, 829, 1010, 1235, 1347
HpaII CCGG 6 cut(s) 74, 116, 137, 146, 239, 248
HphI GGTGA 3 cut(s) 326, 1157, 1532
Hpy188I TCNGA 4 cut(s) 473, 531, 1234, 1335
Hpy188III TCNNGA 8 cut(s) 41, 146, 248, 424, 643, 1072, 1083, 1123
Hpy99I CGWCG 1 cut(s) 1164
HpyCH4III ACNGT 4 cut(s) 199, 294, 1341, 1582
HpyCH4IV ACGT 3 cut(s) 397, 1569, 1599
HpyCH4V TGCA 2 cut(s) 503, 971
HpyF10VI GCNNNNNNNGC 2 cut(s) 732, 806
HpyF3I CTNAG 4 cut(s) 462, 470, 855, 1449
HpySE526I ACGT 3 cut(s) 397, 1569, 1599
Hsp92I GRCGYC 1 cut(s) 807
Kpn2I TCCGGA 2 cut(s) 145, 247
KspI CCGCGG 1 cut(s) 411
Kzo9I GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
LmnI GCTCC 2 cut(s) 821, 986
Lsp1109I GCAGC 2 cut(s) 1441, 1444
MabI ACCWGGT 1 cut(s) 1480
MaeI CTAG 7 cut(s) 66, 87, 108, 159, 210, 261, 966
MaeII ACGT 3 cut(s) 397, 1569, 1599
MaeIII GTNAC 3 cut(s) 398, 1484, 1570
MalI GATC 8 cut(s) 422, 675, 954, 1158, 1289, 1320, 1503, 1539
MboI GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
MboII GAAGA 8 cut(s) 84, 207, 776, 907, 1160, 1175, 1451, 1577
MflI RGATCY 1 cut(s) 952
MhlI GDGCHC 2 cut(s) 669, 1599
MluCI AATT 3 cut(s) 877, 1025, 1280
MlyI GAGTC 3 cut(s) 363, 776, 1244
MroI TCCGGA 2 cut(s) 145, 247
MseI TTAA 5 cut(s) 483, 912, 1299, 1434, 1614
MslI CAYNNNNRTG 1 cut(s) 596
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 6 cut(s) 74, 116, 137, 146, 239, 248
MspR9I CCNGG 7 cut(s) 117, 138, 240, 623, 930, 1043, 1482
MvaI CCWGG 4 cut(s) 623, 930, 1043, 1482
MvnI CGCG 2 cut(s) 410, 1476
MwoI GCNNNNNNNGC 2 cut(s) 732, 806
NciI CCSGG 3 cut(s) 117, 138, 240
NdeII GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
NlaIV GGNNCC 1 cut(s) 1065
NmeAIII GCCGAG 1 cut(s) 1336
NmuCI GTSAC 1 cut(s) 1570
NspI RCATGY 1 cut(s) 1411
PagI TCATGA 2 cut(s) 423, 1071
PaqCI CACCTGC 1 cut(s) 531
PciI ACATGT 1 cut(s) 1407
PcsI WCGNNNNNNNCGW 1 cut(s) 1596
PfeI GAWTC 6 cut(s) 476, 510, 716, 829, 1010, 1347
PfoI TCCNGGA 1 cut(s) 621
PkrI GCNGC 3 cut(s) 409, 1456, 1459
Ple19I CGATCG 1 cut(s) 1159
PleI GAGTC 3 cut(s) 362, 775, 1243
PpsI GAGTC 3 cut(s) 362, 775, 1243
PscI ACATGT 1 cut(s) 1407
Psp124BI GAGCTC 1 cut(s) 669
Psp6I CCWGG 4 cut(s) 621, 928, 1041, 1480
PspGI CCWGG 4 cut(s) 621, 928, 1041, 1480
PspN4I GGNNCC 1 cut(s) 1065
PspPI GGNCC 3 cut(s) 625, 728, 1478
PsrI GAACNNNNNNTAC 2 cut(s) 542, 574
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 952
PvuI CGATCG 1 cut(s) 1159
RsaI GTAC 4 cut(s) 52, 386, 433, 560
RsaNI GTAC 4 cut(s) 51, 385, 432, 559
RseI CAYNNNNRTG 1 cut(s) 596
SacI GAGCTC 1 cut(s) 669
SacII CCGCGG 1 cut(s) 411
SalI GTCGAC 2 cut(s) 836, 887
SaqAI TTAA 5 cut(s) 483, 912, 1299, 1434, 1614
SatI GCNGC 3 cut(s) 408, 1455, 1458
Sau3AI GATC 8 cut(s) 420, 673, 952, 1156, 1287, 1318, 1501, 1537
Sau96I GGNCC 3 cut(s) 625, 728, 1478
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 3 cut(s) 363, 776, 1244
ScrFI CCNGG 7 cut(s) 117, 138, 240, 623, 930, 1043, 1482
SduI GDGCHC 2 cut(s) 669, 1599
SexAI ACCWGGT 1 cut(s) 1480
SfcI CTRYAG 3 cut(s) 309, 1239, 1521
Sfr303I CCGCGG 1 cut(s) 411
SgrBI CCGCGG 1 cut(s) 411
SinI GGWCC 2 cut(s) 625, 1478
SmiMI CAYNNNNRTG 1 cut(s) 596
Sse9I AATT 3 cut(s) 877, 1025, 1280
SsiI CCGC 9 cut(s) 167, 269, 408, 410, 443, 707, 726, 1258, 1476
SspMI CTAG 7 cut(s) 66, 87, 108, 159, 210, 261, 966
SstI GAGCTC 1 cut(s) 669
StyD4I CCNGG 7 cut(s) 115, 136, 238, 621, 928, 1041, 1480
TaaI ACNGT 4 cut(s) 199, 294, 1341, 1582
TaiI ACGT 3 cut(s) 400, 1572, 1602
TaqI TCGA 3 cut(s) 837, 888, 1005
TaqII GACCGA 2 cut(s) 509, 1388
TasI AATT 3 cut(s) 877, 1025, 1280
TatI WGTACW 4 cut(s) 50, 384, 431, 558
TauI GCSGC 1 cut(s) 410
TfiI GAWTC 6 cut(s) 476, 510, 716, 829, 1010, 1347
Tru1I TTAA 5 cut(s) 483, 912, 1299, 1434, 1614
Tru9I TTAA 5 cut(s) 483, 912, 1299, 1434, 1614
TscAI CASTG 6 cut(s) 409, 510, 807, 907, 1062, 1453
TseFI GTSAC 1 cut(s) 1570
TseI GCWGC 2 cut(s) 1454, 1457
Tsp45I GTSAC 1 cut(s) 1570
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 6 cut(s) 409, 510, 807, 907, 1062, 1453
VpaK11BI GGWCC 2 cut(s) 625, 1478
XapI RAATTY 3 cut(s) 877, 1025, 1280
XceI RCATGY 1 cut(s) 1411
XcmI CCANNNNNNNNNTGG 2 cut(s) 584, 1043
XmiI GTMKAC 9 cut(s) 35, 80, 122, 173, 203, 275, 296, 837, 888
XspI CTAG 7 cut(s) 66, 87, 108, 159, 210, 261, 966
ZrmI AGTACT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.