RLG00000004739

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
61839320 .. 61845290
5971 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004739

Sequence Viewer

Length: 3060 bp
ATGTTTGGTTCATCGAGCCCTTTTGGGCAGTCATCTAACACCCCATTTGGGTCTCAATCGCTCTTCGGGCAAAGCAGCAACACGAATAACAATCCTTTTGCTCCCCAGCCCTTTGGTAGCACCACTCCATTTGGTGCCCAGACAGGGAGTTCCCTATTTGGGGGAATTTCAACTGGCGTATTTGGTCAAACCCAATCCTCGCCTTTTGGTTCTTCATCCTCGCCAGCTTTTGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCTTCATCCTCGCCAGCTTTAGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCTTCATCCCCGCCAGCTTTTGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCTTCATCCTCGCCAGCTTTTGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCTTCATCAGCTTTTGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTCGTGCACCATTGTCTACTCAAACAAGTCCATTTGGTGGTACGTCTGCTATTGGAGCATTTGGGTCGAGTCCCGCTCAAACAAGTCCATTTGGAAGCACAGCTCAACCATCACAACCAGCATTCGGAAGCAATATGTTTGGGGCTTCATCTCCTTTCGGAGGGCAGAGTTCGCCATTTGGGGCTCAGTCAACAACAACAACACCAACACTTGGAAACACTGCCTTTGGACAGCCAGCTTTTGGGGGCCAACGGGGTGGAAGTAGAGTGACTGCTTACACTGGCACATCTGAACCAGATAGTAATGGAATGGGGAAATTGGAGTCAATATCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAATTGAGATGGGAGGATTACCAATTAGGGGATAAGGGTGGATCGTCTCCTGCTGGTGCGGGTAGCTTTGGCATGTCAACTATACAGACAAATACTTTGAATCCTAACCCTGCACCATCTTTTTCTCAAACATCTTCAAGTCCTTTTAATACGTCAACCTCATCTGGTTTATTTGCCCAAAAACCCTCATCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATTTTTTTACACCTGCATCATCTGCCTCACCATTTGGCCAAACGTCGTCTCCAGCTATTTTTAGTTCACCATCTTCCTTTTCATTCTCTACCCCGGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCCTTTGGGCTGAATCTATCTACCTTTGGTTCAAACTTGTTCAGTAATACTTCCAGTTTGCAGAGCAGTTCATTGGGTACTACAAGCAACCAACTGGGTATTACTCAACCAGCTCCTGCTTTTCCTACTTTCCAGACATCTCAGCCTCTTCAGAGTAACCTTCCCAATTTGATCGGTTTTGGTTTACTACATTCTTCTGGCACTAGTGTCACCATAAACCTAACTTCTGGTACTGCTGTCACTATAACCCCCACTCCTGGCAGTACTGTCACCATAACCACCTCAACTTCTGGTAGTACTACTATCAATATATCCCCCACTTCTGAAACTACCTCAAGTAATGCACCTTCGTCAACTGGAGAAACTTCATCTCCATTTAGCTTCAGGCTTCCCCATCCTGCCCCAAAGTCTCCGAGTTTATTTCAACCCTTCAACAGTTTGGATAAAAAACCGCCAGCTGTACAACCAATACATTCTACAAGCTCGTCTCTGGTTCCAACTCCTGTTCCTGCACAGCCAATTGAAGATGGTGTCAGAGAATCCATTAAAAACCAGAACGATGTCACACTGGGAATCACAAAGCAATTGCTTCTGGATGTAGGCAGGGACAACAACATGGTGTACTCGCCGCTGTCCATCCACGTGGTTCTTGGCCTGATAGCAGCTGGGTCAACAAGAGGAACTAACAGGGACCAGATTCTCAATTTCCTGAAGGCAAAGTCCACCGAGGAACTCAATGACTTTGCTTCCAAGCTTGTCCCTCTGGTCTTTGCTGACGGATCCCCAAAGGGAGGGCCTTACTTATCATTCGCAAATAGTGTTTGGCTCGACAAGTCTCTCAGTTTCAAGACTTCTTTCAAACAGGTAGTGGACACTGCATACAAGGCGGCTTTGAGTCAAGTTGACTTTAAGACCAAGGCTGAGGATATCCGATGTGAAGTGAATTCATGGGTCGAGGAGGAGACTAAAGGCCTTATCATAGAGGTTCTTCCCCCTATGTCAGTTGACAGCACAACAAGGCTCATCCTTGCTAATGCAGTATACTTTAAAGGAGATTGGACTGAGAAGTTCCACACATCACTAACAAAAACAGATGATTTCCACCTTATCGATGGGAGGAGGTCAGTAAAGGCACCCTTTATGACCAGCTGGAATAAACAATTCATAAGTGCCTTTGACGGTTTCAAAGTCTTAAAGCTTCCTTACGAGCATGGTGGAGATCACATCCGGCGTTTCTCCATGTATGTGTATCTTCCAAATGCAATAGATGGCCTGCCAGCTTTAGTTGAGAGAGTTTGTTCAGAGTCTGGATTTGTGGATCGTTATCTTCCCCGCTTTGCAGTTAAAGTTGGTAGATTTTTAATCCCGAAGTTTAAGCTCTCTGCTGGCTTTGAGGTTAAAGAAGTTCTGCAGACTTTAGGACTAGACTTGCCATTTCGTCCTGGAAGTTTGTCACAGATGGTGGACTCATCTTTGGGGCTATGTATGTCTTGCATACGCCATAAATCCTTCATTGAAGTTAATGAAGAAGGCACAGAAGCTGCGACTGTTACTGTTGCTTTTGGTTTCACTGACTGTATCTCAATCCAAGATCCTCCGATAGACTTTGAGGCAGATCACCCATTCCTTTTCCTGATCAGAGAAGAAACATCTGGAGCAGTGCTGCTCATTGGTCATGTCCTCAATCCCATTGCAGATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1020

Amino Acids

106.27

Weight (kDa)

6.0

Isoelectric Point (pI)

63.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 291 - 310 3.4e-06 Nup98, Gle2-binding sequence
Serpin PF00079 636 - 1015 3.1e-85 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1204
Acc36I ACCTGC 1 cut(s) 1204
AccB1I GGYRCC 2 cut(s) 134, 2488
AccBSI CCGCTC 1 cut(s) 620
AccI GTMKAC 2 cut(s) 560, 2397
AciI CCGC 7 cut(s) 359, 618, 968, 1808, 1985, 2243, 2689
AclWI GGATC 5 cut(s) 958, 2130, 2143, 2682, 2942
AcoI YGGCCR 1 cut(s) 1219
AcsI RAATTY 2 cut(s) 165, 2299
AcuI CTGAAG 3 cut(s) 1490, 1723, 2087
AcvI CACGTG 1 cut(s) 1999
AfaI GTAC 7 cut(s) 586, 1435, 1588, 1621, 1654, 1818, 1979
AhlI ACTAGT 1 cut(s) 1559
AjnI CCWGG 2 cut(s) 1612, 2797
Alw21I GWGCWC 1 cut(s) 553
Alw26I GTCTC 7 cut(s) 57, 960, 1236, 1770, 1848, 2196, 2312
Alw44I GTGCAC 1 cut(s) 549
AlwI GGATC 5 cut(s) 958, 2130, 2143, 2682, 2942
AlwNI CAGNNNCTG 3 cut(s) 1472, 2663, 2897
AoxI GGCC 6 cut(s) 790, 1219, 2008, 2150, 2326, 2626
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 4 cut(s) 75, 2018, 2897, 3019
ApoI RAATTY 2 cut(s) 165, 2299
ArsI GACNNNNNNTTYG 2 cut(s) 988, 1020
AspS9I GGNCC 3 cut(s) 790, 2047, 2150
AsuC2I CCSGG 1 cut(s) 1277
AsuHPI GGTGA 7 cut(s) 1128, 1146, 1203, 1242, 1558, 1618, 2966
AvaII GGWCC 1 cut(s) 2047
BaeGI GKGCMC 2 cut(s) 139, 553
BaeI ACNNNNGTAYC 2 cut(s) 1578, 1611
BalI TGGCCA 1 cut(s) 1221
BamHI GGATCC 1 cut(s) 2135
BanI GGYRCC 2 cut(s) 134, 2488
BanII GRGCYC 2 cut(s) 20, 730
BarI GAAGNNNNNNTAC 2 cut(s) 1687, 1719
BauI CACGAG 1 cut(s) 905
BbrPI CACGTG 1 cut(s) 1999
Bbv12I GWGCWC 1 cut(s) 553
BbvCI CCTCAGC 1 cut(s) 2277
BbvI GCAGC 4 cut(s) 87, 2030, 2884, 3006
BcgI CGANNNNNNTGC 2 cut(s) 591, 625
BciT130I CCWGG 2 cut(s) 1614, 2799
BclI TGATCA 1 cut(s) 2991
BcnI CCSGG 1 cut(s) 1277
BcoDI GTCTC 7 cut(s) 57, 960, 1236, 1770, 1848, 2196, 2312
BcuI ACTAGT 1 cut(s) 1559
BfaI CTAG 2 cut(s) 1560, 2780
BfmI CTRYAG 1 cut(s) 2765
BfuAI ACCTGC 1 cut(s) 1204
BisI GCNGC 6 cut(s) 76, 1985, 2019, 2244, 2898, 3020
BlsI GCNGC 6 cut(s) 77, 1986, 2020, 2245, 2899, 3021
BmcAI AGTACT 2 cut(s) 1621, 1654
Bme1390I CCNGG 3 cut(s) 1277, 1614, 2799
Bme18I GGWCC 1 cut(s) 2047
BmgT120I GGNCC 3 cut(s) 790, 2047, 2150
BmiI GGNNCC 6 cut(s) 136, 791, 1851, 2048, 2137, 2490
BmrFI CCNGG 3 cut(s) 1277, 1614, 2799
BmrI ACTGGG 2 cut(s) 1460, 1934
BmsI GCATC 6 cut(s) 266, 335, 404, 473, 536, 1208
BmuI ACTGGG 2 cut(s) 1460, 1934
BplI GAGNNNNNCTC 2 cut(s) 604, 636
BpmI CTGGAG 8 cut(s) 252, 321, 390, 459, 522, 1218, 1734, 3030
Bpu10I CCTNAGC 1 cut(s) 2277
BpuEI CTTGAG 1 cut(s) 1675
BpuMI CCSGG 1 cut(s) 1277
Bsa29I ATCGAT 1 cut(s) 2466
BsaAI YACGTR 1 cut(s) 1999
BsaBI GATNNNNATC 1 cut(s) 2679
BsaI GGTCTC 1 cut(s) 57
BsaJI CCNNGG 3 cut(s) 1275, 2082, 2271
BsaXI ACNNNNNCTCC 6 cut(s) 1216, 1246, 1594, 1624, 1711, 1741
Bse1I ACTGG 7 cut(s) 178, 829, 1117, 1410, 1455, 1717, 1929
Bse3DI GCAATG 2 cut(s) 885, 3045
Bse8I GATNNNNATC 1 cut(s) 2679
BseBI CCWGG 2 cut(s) 1614, 2799
BseCI ATCGAT 1 cut(s) 2466
BseDI CCNNGG 3 cut(s) 1275, 2082, 2271
BseJI GATNNNNATC 1 cut(s) 2679
BseMI GCAATG 2 cut(s) 885, 3045
BseMII CTCAG 5 cut(s) 743, 1511, 2209, 2268, 2409
BseNI ACTGG 7 cut(s) 178, 829, 1117, 1410, 1455, 1717, 1929
BseRI GAGGAG 3 cut(s) 2327, 2330, 2488
BseSI GKGCMC 2 cut(s) 139, 553
BseXI GCAGC 4 cut(s) 87, 2030, 2884, 3006
BseYI CCCAGC 2 cut(s) 105, 2021
BsgI GTGCAG 2 cut(s) 1005, 1851
BshFI GGCC 6 cut(s) 792, 1221, 2010, 2152, 2328, 2628
BshNI GGYRCC 2 cut(s) 134, 2488
BshVI ATCGAT 1 cut(s) 2466
BsiHKAI GWGCWC 1 cut(s) 553
BsiSI CCGG 2 cut(s) 1277, 2584
BslFI GGGAC 4 cut(s) 600, 1976, 2060, 2099
BsmAI GTCTC 7 cut(s) 57, 960, 1236, 1770, 1848, 2196, 2312
BsmBI CGTCTC 3 cut(s) 960, 1236, 1848
BsmFI GGGAC 4 cut(s) 600, 1976, 2060, 2099
BsmI GAATGC 1 cut(s) 665
BsnI GGCC 6 cut(s) 792, 1221, 2010, 2152, 2328, 2628
Bso31I GGTCTC 1 cut(s) 57
Bsp1286I GDGCHC 4 cut(s) 20, 139, 553, 730
Bsp1407I TGTACA 1 cut(s) 1816
Bsp143I GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
BspACI CCGC 7 cut(s) 359, 618, 968, 1808, 1985, 2243, 2689
BspANI GGCC 6 cut(s) 792, 1221, 2010, 2152, 2328, 2628
BspCNI CTCAG 5 cut(s) 742, 1510, 2208, 2269, 2410
BspDI ATCGAT 1 cut(s) 2466
BspLI GGNNCC 6 cut(s) 136, 791, 1851, 2048, 2137, 2490
BspMAI CTGCAG 1 cut(s) 2769
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 5 cut(s) 958, 2130, 2143, 2682, 2942
BspQI GCTCTTC 1 cut(s) 68
BspT107I GGYRCC 2 cut(s) 134, 2488
BspTNI GGTCTC 1 cut(s) 57
BsrBI CCGCTC 1 cut(s) 620
BsrDI GCAATG 2 cut(s) 885, 3045
BsrGI TGTACA 1 cut(s) 1816
BsrI ACTGG 7 cut(s) 178, 829, 1117, 1410, 1455, 1717, 1929
BssECI CCNNGG 3 cut(s) 1275, 2082, 2271
BssMI GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
BssNAI GTATAC 1 cut(s) 2398
BssSI CACGAG 1 cut(s) 905
BssT1I CCWWGG 1 cut(s) 2271
Bst1107I GTATAC 1 cut(s) 2398
Bst2BI CACGAG 1 cut(s) 905
Bst2UI CCWGG 2 cut(s) 1614, 2799
Bst4CI ACNGT 8 cut(s) 1158, 1335, 1624, 1793, 2537, 2905, 2911, 2933
Bst6I CTCTTC 2 cut(s) 68, 1509
BstAPI GCANNNNNTGC 6 cut(s) 278, 347, 416, 485, 548, 1205
BstAUI TGTACA 1 cut(s) 1816
BstBAI YACGTR 1 cut(s) 1999
BstDEI CTNAG 5 cut(s) 729, 1497, 2195, 2277, 2418
BstENI CCTNNNNNAGG 1 cut(s) 702
BstKTI GATC 9 cut(s) 953, 1530, 2138, 2578, 2677, 2950, 2974, 2994, 3055
BstMAI GTCTC 7 cut(s) 57, 960, 1236, 1770, 1848, 2196, 2312
BstMBI GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
BstNI CCWGG 2 cut(s) 1614, 2799
BstNSI RCATGY 1 cut(s) 985
BstSCI CCNGG 3 cut(s) 1275, 1612, 2797
BstSFI CTRYAG 1 cut(s) 2765
BstSLI GKGCMC 2 cut(s) 139, 553
BstV1I GCAGC 4 cut(s) 87, 2030, 2884, 3006
BstX2I RGATCY 2 cut(s) 2135, 2947
BstXI CCANNNNNNTGG 3 cut(s) 113, 800, 1999
BstYI RGATCY 2 cut(s) 2135, 2947
BstZ17I GTATAC 1 cut(s) 2398
Bsu15I ATCGAT 1 cut(s) 2466
BsuRI GGCC 6 cut(s) 792, 1221, 2010, 2152, 2328, 2628
BsuTUI ATCGAT 1 cut(s) 2466
BtsI GCAGTG 3 cut(s) 762, 2229, 3021
BtsIMutI CAGTG 6 cut(s) 762, 822, 1922, 2229, 2925, 3021
BveI ACCTGC 1 cut(s) 1204
CaiI CAGNNNCTG 3 cut(s) 1472, 2663, 2897
Cfr13I GGNCC 3 cut(s) 790, 2047, 2150
ClaI ATCGAT 1 cut(s) 2466
Csp6I GTAC 7 cut(s) 585, 1434, 1587, 1620, 1653, 1817, 1978
CspCI CAANNNNNGTGG 2 cut(s) 112, 147
CviAII CATG 6 cut(s) 982, 1972, 2304, 2567, 2596, 3032
CviQI GTAC 7 cut(s) 585, 1434, 1587, 1620, 1653, 1817, 1978
DdeI CTNAG 5 cut(s) 729, 1497, 2195, 2277, 2418
DpnI GATC 9 cut(s) 952, 1529, 2137, 2577, 2676, 2949, 2973, 2993, 3054
DpnII GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
DraI TTTAAA 1 cut(s) 2404
EaeI YGGCCR 1 cut(s) 1219
Eam1104I CTCTTC 2 cut(s) 68, 1509
EarI CTCTTC 2 cut(s) 68, 1509
Eco130I CCWWGG 1 cut(s) 2271
Eco147I AGGCCT 1 cut(s) 2328
Eco24I GRGCYC 2 cut(s) 20, 730
Eco31I GGTCTC 1 cut(s) 57
Eco32I GATATC 1 cut(s) 2284
Eco47I GGWCC 1 cut(s) 2047
Eco57I CTGAAG 3 cut(s) 1490, 1723, 2087
Eco72I CACGTG 1 cut(s) 1999
EcoNI CCTNNNNNAGG 1 cut(s) 702
EcoO109I RGGNCCY 1 cut(s) 2150
EcoRI GAATTC 1 cut(s) 2299
EcoRII CCWGG 2 cut(s) 1612, 2797
EcoRV GATATC 1 cut(s) 2284
EcoT14I CCWWGG 1 cut(s) 2271
EcoT38I GRGCYC 2 cut(s) 20, 730
ErhI CCWWGG 1 cut(s) 2271
Esp3I CGTCTC 3 cut(s) 960, 1236, 1848
FaeI CATG 6 cut(s) 985, 1975, 2307, 2570, 2599, 3035
FalI AAGNNNNNCTT 2 cut(s) 2477, 2509
FaqI GGGAC 4 cut(s) 600, 1976, 2060, 2099
FatI CATG 6 cut(s) 981, 1971, 2303, 2566, 2595, 3031
FauI CCCGC 4 cut(s) 366, 625, 961, 2696
FbaI TGATCA 1 cut(s) 2991
FblI GTMKAC 2 cut(s) 560, 2397
Fnu4HI GCNGC 6 cut(s) 76, 1985, 2019, 2244, 2898, 3020
FriOI GRGCYC 2 cut(s) 20, 730
Fsp4HI GCNGC 6 cut(s) 76, 1985, 2019, 2244, 2898, 3020
FspBI CTAG 2 cut(s) 1560, 2780
GluI GCNGC 6 cut(s) 76, 1985, 2019, 2244, 2898, 3020
GsaI CCCAGC 2 cut(s) 109, 2025
GsuI CTGGAG 8 cut(s) 252, 321, 390, 459, 522, 1218, 1734, 3030
HaeIII GGCC 6 cut(s) 792, 1221, 2010, 2152, 2328, 2628
HapII CCGG 2 cut(s) 1277, 2584
Hin1II CATG 6 cut(s) 985, 1975, 2307, 2570, 2599, 3035
HincII GTYRAC 7 cut(s) 735, 987, 1065, 1710, 2028, 2260, 2362
HindII GTYRAC 7 cut(s) 735, 987, 1065, 1710, 2028, 2260, 2362
HindIII AAGCTT 2 cut(s) 2108, 2552
HpaII CCGG 2 cut(s) 1277, 2584
HphI GGTGA 7 cut(s) 1128, 1146, 1203, 1242, 1558, 1618, 2966
Hpy188III TCNNGA 9 cut(s) 905, 1489, 1949, 2065, 2203, 2664, 2722, 2989, 3009
Hpy99I CGWCG 1 cut(s) 1231
HpyAV CCTTC 7 cut(s) 1116, 1526, 1713, 1795, 2062, 2875, 2879
HpyCH4III ACNGT 8 cut(s) 1158, 1335, 1624, 1793, 2537, 2905, 2911, 2933
HpyCH4IV ACGT 4 cut(s) 587, 1061, 1226, 1998
HpyF3I CTNAG 5 cut(s) 729, 1497, 2195, 2277, 2418
HpySE526I ACGT 4 cut(s) 587, 1061, 1226, 1998
Hsp92II CATG 6 cut(s) 985, 1975, 2307, 2570, 2599, 3035
Ksp22I TGATCA 1 cut(s) 2991
Kzo9I GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
LguI GCTCTTC 1 cut(s) 68
LmnI GCTCC 9 cut(s) 106, 254, 323, 392, 461, 524, 599, 1474, 3011
Lsp1109I GCAGC 4 cut(s) 87, 2030, 2884, 3006
LweI GCATC 6 cut(s) 266, 335, 404, 473, 536, 1208
MaeI CTAG 2 cut(s) 1560, 2780
MaeII ACGT 4 cut(s) 587, 1061, 1226, 1998
MalI GATC 9 cut(s) 952, 1529, 2137, 2577, 2676, 2949, 2973, 2993, 3054
MbiI CCGCTC 1 cut(s) 620
MboI GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
MfeI CAATTG 2 cut(s) 1875, 1940
MflI RGATCY 2 cut(s) 2135, 2947
MhlI GDGCHC 4 cut(s) 20, 139, 553, 730
MlsI TGGCCA 1 cut(s) 1221
MluNI TGGCCA 1 cut(s) 1221
MlyI GAGTC 5 cut(s) 622, 875, 2260, 2669, 2816
MmeI TCCRAC 1 cut(s) 1877
Mox20I TGGCCA 1 cut(s) 1221
MscI TGGCCA 1 cut(s) 1221
MslI CAYNNNNRTG 2 cut(s) 1997, 2600
Msp20I TGGCCA 1 cut(s) 1221
MspA1I CMGCKG 4 cut(s) 1814, 1987, 2021, 2505
MspI CCGG 2 cut(s) 1277, 2584
MspR9I CCNGG 3 cut(s) 1277, 1614, 2799
MunI CAATTG 2 cut(s) 1875, 1940
Mva1269I GAATGC 1 cut(s) 665
MvaI CCWGG 2 cut(s) 1614, 2799
NciI CCSGG 1 cut(s) 1277
NdeII GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
NlaIII CATG 6 cut(s) 985, 1975, 2307, 2570, 2599, 3035
NlaIV GGNNCC 6 cut(s) 136, 791, 1851, 2048, 2137, 2490
NmuCI GTSAC 7 cut(s) 811, 902, 1564, 1594, 1624, 1918, 2808
NspI RCATGY 1 cut(s) 985
PaqCI CACCTGC 1 cut(s) 1204
PceI AGGCCT 1 cut(s) 2328
PciSI GCTCTTC 1 cut(s) 68
PctI GAATGC 1 cut(s) 665
PfeI GAWTC 5 cut(s) 1009, 1369, 1895, 1929, 2053
PfoI TCCNGGA 1 cut(s) 2797
PkrI GCNGC 6 cut(s) 77, 1986, 2020, 2245, 2899, 3021
PleI GAGTC 5 cut(s) 621, 874, 2259, 2668, 2816
PmaCI CACGTG 1 cut(s) 1999
PmlI CACGTG 1 cut(s) 1999
PpsI GAGTC 5 cut(s) 621, 874, 2259, 2668, 2816
Ppu21I YACGTR 1 cut(s) 1999
Psp6I CCWGG 2 cut(s) 1612, 2797
PspCI CACGTG 1 cut(s) 1999
PspFI CCCAGC 2 cut(s) 105, 2021
PspGI CCWGG 2 cut(s) 1612, 2797
PspN4I GGNNCC 6 cut(s) 136, 791, 1851, 2048, 2137, 2490
PspPI GGNCC 3 cut(s) 790, 2047, 2150
PstI CTGCAG 1 cut(s) 2769
PstNI CAGNNNCTG 3 cut(s) 1472, 2663, 2897
PsuI RGATCY 2 cut(s) 2135, 2947
PvuII CAGCTG 3 cut(s) 1814, 2021, 2505
RsaI GTAC 7 cut(s) 586, 1435, 1588, 1621, 1654, 1818, 1979
RsaNI GTAC 7 cut(s) 585, 1434, 1587, 1620, 1653, 1817, 1978
RseI CAYNNNNRTG 2 cut(s) 1997, 2600
SapI GCTCTTC 1 cut(s) 68
SatI GCNGC 6 cut(s) 76, 1985, 2019, 2244, 2898, 3020
Sau3AI GATC 9 cut(s) 950, 1527, 2135, 2575, 2674, 2947, 2971, 2991, 3052
Sau96I GGNCC 3 cut(s) 790, 2047, 2150
ScaI AGTACT 2 cut(s) 1621, 1654
SchI GAGTC 5 cut(s) 622, 875, 2260, 2669, 2816
ScrFI CCNGG 3 cut(s) 1277, 1614, 2799
SduI GDGCHC 4 cut(s) 20, 139, 553, 730
SfaNI GCATC 6 cut(s) 266, 335, 404, 473, 536, 1208
SfcI CTRYAG 1 cut(s) 2765
SinI GGWCC 1 cut(s) 2047
SmiMI CAYNNNNRTG 2 cut(s) 1997, 2600
SmlI CTYRAG 1 cut(s) 1690
SmoI CTYRAG 1 cut(s) 1690
SpeI ACTAGT 1 cut(s) 1559
SseBI AGGCCT 1 cut(s) 2328
SsiI CCGC 7 cut(s) 359, 618, 968, 1808, 1985, 2243, 2689
SspMI CTAG 2 cut(s) 1560, 2780
StuI AGGCCT 1 cut(s) 2328
StyD4I CCNGG 3 cut(s) 1275, 1612, 2797
StyI CCWWGG 1 cut(s) 2271
TaaI ACNGT 8 cut(s) 1158, 1335, 1624, 1793, 2537, 2905, 2911, 2933
TaiI ACGT 4 cut(s) 590, 1064, 1229, 2001
TaqI TCGA 5 cut(s) 14, 611, 2184, 2310, 2466
TatI WGTACW 4 cut(s) 1619, 1652, 1816, 1977
TauI GCSGC 2 cut(s) 1987, 2246
TfiI GAWTC 5 cut(s) 1009, 1369, 1895, 1929, 2053
TscAI CASTG 6 cut(s) 769, 829, 1929, 2236, 2932, 3021
TseFI GTSAC 7 cut(s) 811, 902, 1564, 1594, 1624, 1918, 2808
TseI GCWGC 4 cut(s) 75, 2018, 2897, 3019
Tsp45I GTSAC 7 cut(s) 811, 902, 1564, 1594, 1624, 1918, 2808
TspGWI ACGGA 1 cut(s) 2148
TspRI CASTG 6 cut(s) 769, 829, 1929, 2236, 2932, 3021
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 1 cut(s) 2047
XagI CCTNNNNNAGG 1 cut(s) 702
XapI RAATTY 2 cut(s) 165, 2299
XceI RCATGY 1 cut(s) 985
XcmI CCANNNNNNNNNTGG 2 cut(s) 2003, 2465
XmiI GTMKAC 2 cut(s) 560, 2397
XspI CTAG 2 cut(s) 1560, 2780
ZrmI AGTACT 2 cut(s) 1621, 1654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.