RchiOBHm_Chr5g0060021

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000163
Physical Location & Seq
Reverse (-)
65133115 .. 65134191
1077 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33657

Sequence Viewer

Length: 1077 bp
ATGATCTACTCCCCGATATCCATCCACATCGTCCTCAGCTTAATAGCCGCCGGGAAGAACTGTCCCCAGTTTCTTTCTTTTCTCAAGTCCAAGTCCATCAACGATCTCAACTCCCTCGCCTGCGATCTCGTCACTTCCGTTTTGGTCGATTCACCCACTAGAGGTGGGCCACGTTTGAACTTCACAAATGGCGTCTGGGTCGACAAGTCTGTTCCTCTGCAGGAATGTTACAAACAGGTGGTGTTGGATTCTTACAAGGCGGCTCTGAACCAAGTCGATTTCAAAACCAATATAGAACAAGTGAGAATTCAAGTGAATTCATGGGTCGAGAAAGAGACGAAAGGCCTCATCCCTCAGATTCTTCCTCCCGGCTCAGTCAACAGTGGGACGAGTCTCATCTTTGCAAACGCCTTATACTTCAAAGCAACTTGGGGCGACACGTACTTTAATGCATCGAAGACAAAAGAGCATGAGTTTCACCTTCTGAATGGGGACTTGGTTAAGGGAGTGCCTTTCATGACCAGCAAGTATTGTCACTCAATCGGTACCTTTGACGGCTTTAAAGTCTTGAGACTTCCTTTCAGGACGTATGACCATGATGACTTATTAAGGGATTGCCCACGTAACCGTAAATACGACCCCCGGCAGTTCTCTATGTTCTGGTTGCTTCCGGATGCAAGAGATGGGCTGCCGGCTCTGGCCGAGAGAGTTTGTTCCGAAGCTGGGTTTCTAGATCGCCATAGATCGTGTGGGAGTGTTAGGGTGGGGGACTTCTTGATCCCAAAGTTCAAAATTTCTTCCAGGTTTGGAGCTTCGGCTGTTCTAAAGAAAATGGGGCTGGGGGATGTTTGTAATTCAATGGAGATTGTTCACGAATCTGTAATAGAGGTTGATGAAAATGGCACAACAGCTGCAGCTGCAACTTGTGGTCAATTGTGTTTTAGCTCAGGCAAACACTATGAGCCTAAAGAAAAGGTAGACTTTGTGGCTGATCACCCCTTCATGTTTCTGATAAGGGAAAACATGACGGGAACAGTGCTGTTCATGGGGCAGGTGCTCAATCCTCTTGCGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

358

Amino Acids

39.85

Weight (kDa)

7.99

Isoelectric Point (pI)

29.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 1 - 355 2.5e-66 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1042
Acc36I ACCTGC 1 cut(s) 1042
Acc65I GGTACC 1 cut(s) 545
AccB1I GGYRCC 1 cut(s) 545
AccI GTMKAC 2 cut(s) 201, 978
AccIII TCCGGA 1 cut(s) 670
AciI CCGC 3 cut(s) 48, 260, 1070
AclWI GGATC 1 cut(s) 772
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 3 cut(s) 306, 316, 792
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 2 cut(s) 443, 547
AfiI CCNNNNNNNGG 3 cut(s) 161, 723, 1070
AflIII ACRYGT 1 cut(s) 438
AgsI TTSAA 6 cut(s) 178, 283, 311, 421, 790, 858
AjnI CCWGG 1 cut(s) 800
AjuI GAANNNNNNNTTGG 2 cut(s) 479, 511
AluBI AGCT 6 cut(s) 39, 722, 812, 911, 917, 945
AluI AGCT 6 cut(s) 39, 722, 812, 911, 917, 945
Alw21I GWGCWC 1 cut(s) 1059
Alw26I GTCTC 3 cut(s) 329, 398, 565
AlwI GGATC 1 cut(s) 772
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 3 cut(s) 167, 343, 699
ApeKI GCWGC 4 cut(s) 688, 911, 914, 917
ApoI RAATTY 3 cut(s) 306, 316, 792
Asp718I GGTACC 1 cut(s) 545
AspS9I GGNCC 1 cut(s) 167
AsuC2I CCSGG 3 cut(s) 52, 369, 643
AsuHPI GGTGA 3 cut(s) 144, 470, 986
BanI GGYRCC 1 cut(s) 545
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 1 cut(s) 1059
BbvCI CCTCAGC 1 cut(s) 35
BbvI GCAGC 4 cut(s) 675, 898, 904, 926
BccI CCATC 3 cut(s) 29, 104, 677
BceAI ACGGC 1 cut(s) 571
BciT130I CCWGG 1 cut(s) 802
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 3 cut(s) 52, 369, 643
BcoDI GTCTC 3 cut(s) 329, 398, 565
BfaI CTAG 2 cut(s) 159, 731
BfmI CTRYAG 2 cut(s) 218, 912
BfuAI ACCTGC 1 cut(s) 1042
BisI GCNGC 6 cut(s) 48, 261, 689, 912, 915, 918
BlsI GCNGC 6 cut(s) 49, 262, 690, 913, 916, 919
Bme1390I CCNGG 4 cut(s) 52, 369, 643, 802
BmgT120I GGNCC 1 cut(s) 167
BmiI GGNNCC 1 cut(s) 547
BmrFI CCNGG 4 cut(s) 52, 369, 643, 802
BmrI ACTGGG 1 cut(s) 61
BmsI GCATC 2 cut(s) 461, 664
BmuI ACTGGG 1 cut(s) 61
BpiI GAAGAC 1 cut(s) 464
Bpu10I CCTNAGC 2 cut(s) 35, 946
BpuEI CTTGAG 2 cut(s) 68, 589
BpuMI CCSGG 3 cut(s) 52, 369, 643
BsaAI YACGTR 2 cut(s) 441, 623
BsaBI GATNNNNATC 1 cut(s) 20
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 641
BsaWI WCCGGW 1 cut(s) 670
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 723, 1070
Bse118I RCCGGY 1 cut(s) 691
Bse1I ACTGG 1 cut(s) 67
Bse8I GATNNNNATC 1 cut(s) 20
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 1 cut(s) 802
BseDI CCNNGG 1 cut(s) 641
BseGI GGATG 4 cut(s) 21, 348, 679, 850
BseJI GATNNNNATC 1 cut(s) 20
BseLI CCNNNNNNNGG 3 cut(s) 161, 723, 1070
BseMII CTCAG 4 cut(s) 49, 368, 387, 960
BseNI ACTGG 1 cut(s) 67
BseXI GCAGC 4 cut(s) 675, 898, 904, 926
BseYI CCCAGC 2 cut(s) 722, 838
BshFI GGCC 3 cut(s) 169, 345, 701
BshNI GGYRCC 1 cut(s) 545
BsiHKAI GWGCWC 1 cut(s) 1059
BsiSI CCGG 5 cut(s) 51, 369, 643, 671, 692
BslFI GGGAC 4 cut(s) 48, 400, 506, 782
BslI CCNNNNNNNGG 3 cut(s) 161, 723, 1070
BsmAI GTCTC 3 cut(s) 329, 398, 565
BsmBI CGTCTC 1 cut(s) 329
BsmFI GGGAC 4 cut(s) 48, 400, 506, 782
BsnI GGCC 3 cut(s) 169, 345, 701
Bsp1286I GDGCHC 1 cut(s) 1059
Bsp13I TCCGGA 1 cut(s) 670
Bsp143I GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
BspACI CCGC 3 cut(s) 48, 260, 1070
BspANI GGCC 3 cut(s) 169, 345, 701
BspCNI CTCAG 4 cut(s) 48, 367, 386, 959
BspEI TCCGGA 1 cut(s) 670
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 1 cut(s) 547
BspMAI CTGCAG 2 cut(s) 222, 916
BspMI ACCTGC 1 cut(s) 1042
BspPI GGATC 1 cut(s) 772
BspT107I GGYRCC 1 cut(s) 545
BsrFI RCCGGY 1 cut(s) 691
BsrI ACTGG 1 cut(s) 67
BssAI RCCGGY 1 cut(s) 691
BssECI CCNNGG 1 cut(s) 641
BssMI GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
BssNI GRCGYC 1 cut(s) 192
Bst2UI CCWGG 1 cut(s) 802
Bst4CI ACNGT 4 cut(s) 62, 383, 629, 1036
BstACI GRCGYC 1 cut(s) 192
BstBAI YACGTR 2 cut(s) 441, 623
BstC8I GCNNGC 2 cut(s) 121, 693
BstDEI CTNAG 4 cut(s) 35, 354, 373, 946
BstF5I GGATG 4 cut(s) 21, 348, 679, 850
BstKTI GATC 7 cut(s) 6, 106, 127, 736, 746, 780, 994
BstMAI GTCTC 3 cut(s) 329, 398, 565
BstMBI GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
BstMWI GCNNNNNNNGC 1 cut(s) 917
BstNI CCWGG 1 cut(s) 802
BstSCI CCNGG 4 cut(s) 50, 367, 641, 800
BstSFI CTRYAG 2 cut(s) 218, 912
BstV1I GCAGC 4 cut(s) 675, 898, 904, 926
BstV2I GAAGAC 1 cut(s) 464
BsuRI GGCC 3 cut(s) 169, 345, 701
BtsCI GGATG 4 cut(s) 21, 348, 679, 850
BtsIMutI CAGTG 2 cut(s) 388, 1041
BveI ACCTGC 1 cut(s) 1042
Cac8I GCNNGC 2 cut(s) 121, 693
CciI TCATGA 1 cut(s) 516
Cfr10I RCCGGY 1 cut(s) 691
Cfr13I GGNCC 1 cut(s) 167
CseI GACGC 1 cut(s) 181
Csp6I GTAC 2 cut(s) 442, 546
CviAII CATG 7 cut(s) 321, 470, 517, 596, 1003, 1024, 1045
CviQI GTAC 2 cut(s) 442, 546
DdeI CTNAG 4 cut(s) 35, 354, 373, 946
DpnI GATC 7 cut(s) 5, 105, 126, 735, 745, 779, 993
DpnII GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
DraI TTTAAA 1 cut(s) 562
EaeI YGGCCR 1 cut(s) 699
Eco147I AGGCCT 1 cut(s) 345
Eco32I GATATC 1 cut(s) 18
EcoRI GAATTC 2 cut(s) 306, 316
EcoRII CCWGG 1 cut(s) 800
EcoRV GATATC 1 cut(s) 18
EcoT22I ATGCAT 1 cut(s) 454
Esp3I CGTCTC 1 cut(s) 329
FaeI CATG 7 cut(s) 324, 473, 520, 599, 1006, 1027, 1048
FalI AAGNNNNNCTT 2 cut(s) 965, 997
FaqI GGGAC 4 cut(s) 48, 400, 506, 782
FatI CATG 7 cut(s) 320, 469, 516, 595, 1002, 1023, 1044
FauI CCCGC 1 cut(s) 1063
FbaI TGATCA 1 cut(s) 991
FblI GTMKAC 2 cut(s) 201, 978
Fnu4HI GCNGC 6 cut(s) 48, 261, 689, 912, 915, 918
FokI GGATG 4 cut(s) 8, 335, 686, 857
Fsp4HI GCNGC 6 cut(s) 48, 261, 689, 912, 915, 918
FspBI CTAG 2 cut(s) 159, 731
GluI GCNGC 6 cut(s) 48, 261, 689, 912, 915, 918
GsaI CCCAGC 2 cut(s) 726, 842
HaeIII GGCC 3 cut(s) 169, 345, 701
HapII CCGG 5 cut(s) 51, 369, 643, 671, 692
HgaI GACGC 1 cut(s) 181
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 7 cut(s) 324, 473, 520, 599, 1006, 1027, 1048
HincII GTYRAC 2 cut(s) 202, 379
HindII GTYRAC 2 cut(s) 202, 379
HinfI GANTC 5 cut(s) 149, 248, 358, 391, 875
HpaII CCGG 5 cut(s) 51, 369, 643, 671, 692
HphI GGTGA 3 cut(s) 144, 470, 986
Hpy166II GTNNAC 4 cut(s) 202, 379, 871, 979
Hpy188I TCNGA 5 cut(s) 267, 357, 486, 718, 1011
Hpy188III TCNNGA 8 cut(s) 328, 517, 568, 583, 671, 731, 775, 872
Hpy8I GTNNAC 4 cut(s) 202, 379, 871, 979
HpyAV CCTTC 2 cut(s) 491, 1009
HpyCH4III ACNGT 4 cut(s) 62, 383, 629, 1036
HpyCH4IV ACGT 4 cut(s) 172, 440, 587, 622
HpyCH4V TGCA 6 cut(s) 220, 404, 452, 677, 914, 920
HpyF10VI GCNNNNNNNGC 1 cut(s) 917
HpyF3I CTNAG 4 cut(s) 35, 354, 373, 946
HpySE526I ACGT 4 cut(s) 172, 440, 587, 622
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 7 cut(s) 324, 473, 520, 599, 1006, 1027, 1048
Kpn2I TCCGGA 1 cut(s) 670
KpnI GGTACC 1 cut(s) 549
KroI GCCGGC 1 cut(s) 691
KroNI GCCGGC 1 cut(s) 693
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
LmnI GCTCC 1 cut(s) 809
Lsp1109I GCAGC 4 cut(s) 675, 898, 904, 926
LweI GCATC 2 cut(s) 461, 664
MaeI CTAG 2 cut(s) 159, 731
MaeII ACGT 4 cut(s) 172, 440, 587, 622
MaeIII GTNAC 4 cut(s) 130, 227, 533, 623
MalI GATC 7 cut(s) 5, 105, 126, 735, 745, 779, 993
MboI GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
MboII GAAGA 4 cut(s) 67, 353, 469, 789
MfeI CAATTG 1 cut(s) 932
MhlI GDGCHC 1 cut(s) 1059
MluCI AATT 5 cut(s) 306, 316, 792, 853, 932
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 9 cut(s) 44, 125, 155, 225, 356, 363, 375, 880, 1074
Mph1103I ATGCAT 1 cut(s) 454
MroI TCCGGA 1 cut(s) 670
MroNI GCCGGC 1 cut(s) 691
MseI TTAA 5 cut(s) 41, 447, 501, 561, 608
MspA1I CMGCKG 2 cut(s) 911, 917
MspI CCGG 5 cut(s) 51, 369, 643, 671, 692
MspR9I CCNGG 4 cut(s) 52, 369, 643, 802
MunI CAATTG 1 cut(s) 932
MvaI CCWGG 1 cut(s) 802
MwoI GCNNNNNNNGC 1 cut(s) 917
NaeI GCCGGC 1 cut(s) 693
NciI CCSGG 3 cut(s) 52, 369, 643
NdeII GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
NgoMIV GCCGGC 1 cut(s) 691
NlaIII CATG 7 cut(s) 324, 473, 520, 599, 1006, 1027, 1048
NlaIV GGNNCC 1 cut(s) 547
NmeAIII GCCGAG 1 cut(s) 727
NmuCI GTSAC 2 cut(s) 130, 533
NsiI ATGCAT 1 cut(s) 454
PagI TCATGA 1 cut(s) 516
PaqCI CACCTGC 1 cut(s) 1042
PceI AGGCCT 1 cut(s) 345
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PdiI GCCGGC 1 cut(s) 693
PfeI GAWTC 4 cut(s) 149, 248, 358, 875
PkrI GCNGC 6 cut(s) 49, 262, 690, 913, 916, 919
PleI GAGTC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 399
Ppu21I YACGTR 2 cut(s) 441, 623
Psp6I CCWGG 1 cut(s) 800
PspFI CCCAGC 2 cut(s) 722, 838
PspGI CCWGG 1 cut(s) 800
PspN4I GGNNCC 1 cut(s) 547
PspPI GGNCC 1 cut(s) 167
PstI CTGCAG 2 cut(s) 222, 916
PvuII CAGCTG 2 cut(s) 911, 917
RsaI GTAC 2 cut(s) 443, 547
RsaNI GTAC 2 cut(s) 442, 546
SalI GTCGAC 1 cut(s) 200
SaqAI TTAA 5 cut(s) 41, 447, 501, 561, 608
SatI GCNGC 6 cut(s) 48, 261, 689, 912, 915, 918
Sau3AI GATC 7 cut(s) 3, 103, 124, 733, 743, 777, 991
Sau96I GGNCC 1 cut(s) 167
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 4 cut(s) 52, 369, 643, 802
SduI GDGCHC 1 cut(s) 1059
SfaNI GCATC 2 cut(s) 461, 664
SfcI CTRYAG 2 cut(s) 218, 912
SmlI CTYRAG 2 cut(s) 83, 568
SmoI CTYRAG 2 cut(s) 83, 568
Sse9I AATT 5 cut(s) 306, 316, 792, 853, 932
SseBI AGGCCT 1 cut(s) 345
SsiI CCGC 3 cut(s) 48, 260, 1070
SspMI CTAG 2 cut(s) 159, 731
StuI AGGCCT 1 cut(s) 345
StyD4I CCNGG 4 cut(s) 50, 367, 641, 800
TaaI ACNGT 4 cut(s) 62, 383, 629, 1036
TaiI ACGT 4 cut(s) 175, 443, 590, 625
TaqI TCGA 5 cut(s) 147, 201, 276, 327, 455
TasI AATT 5 cut(s) 306, 316, 792, 853, 932
TauI GCSGC 2 cut(s) 50, 263
TfiI GAWTC 4 cut(s) 149, 248, 358, 875
Tru1I TTAA 5 cut(s) 41, 447, 501, 561, 608
Tru9I TTAA 5 cut(s) 41, 447, 501, 561, 608
TscAI CASTG 2 cut(s) 388, 1041
TseFI GTSAC 2 cut(s) 130, 533
TseI GCWGC 4 cut(s) 688, 911, 914, 917
Tsp45I GTSAC 2 cut(s) 130, 533
TspDTI ATGAA 5 cut(s) 309, 505, 909, 991, 1033
TspGWI ACGGA 1 cut(s) 127
TspRI CASTG 2 cut(s) 388, 1041
XapI RAATTY 3 cut(s) 306, 316, 792
XbaI TCTAGA 1 cut(s) 730
XcmI CCANNNNNNNNNTGG 1 cut(s) 746
XmiI GTMKAC 2 cut(s) 201, 978
XspI CTAG 2 cut(s) 159, 731
Zsp2I ATGCAT 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.