RLG00000003179

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
45309675 .. 45311494
1820 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003179

Sequence Viewer

Length: 1428 bp
ATGGCAGCAACCCACTCCCTCCTCGGCCGTTCACAGGCCCTCCGTCCAAATTCTTCCGGCCACCGTCTGCCGGTTTCCTTTCTCGTTCTCTTTCTCACTTTCGTCATTGTGTGTATTTCTCTCTTTTGTCCTCTCTCTGATCTGCGTTACCAGAGCCCAAACTCCGATCCTAATACTTTCAACGCCGATGACCATATCAATCCGATCCCGTGGAGATCAATGAACCAGACCCAGAAAGCCAGAGTTCAAACATACATCAGCAACCAGACCGAGGTGGCTTTTACTATCATGAAGCAGCTGTTTTTGAGTAATGAAGCCAAGAACAAAAATATGGTGTACTCGCCGCTATCCATCCACATGGTTCTCAGCCTTTTAGCAGCCGGGTCAAACAGCCCTACACAGGACCAGTTGCTCACCTTCCTCAAGTCCAAGTCCACCCAAGAGCTCAGCTATCTAGCCTCCACCCTTGTGCCTCTGTTCTTTGCGAAAGAATCACCAAATGGCGGGCCTAGCTTGTCATTCACCAATGGCGCTTGGGTAGACAAGTCTCTTCCCGTCAAGCCTTTTTTCAAACGGGTAGTGGACACTGCTTACAGCGCTGCCTTAAAGCAAGTCGATTTCAAGGGCAAGTCGGATGAAGTTAGAATGGAAGTGAATTCATGGGCCGAGAAGGAGACTAATGGTCGCATCAAAGATATTCTTGCTCCTGGCTTAGTTAACAGCCAAACTAGGTTCATTCTCGCCAATGCATTATACTTTAAAGGAGATTGGGAAGACAGGTTTGATGCATCAGGAACGAAAGAGTATGATTTTCACCTTCACAATGGGAGCTCAGTCAAGATACCTTTCATGACAGAGTGGATAAGGAGCTGGGGGAGGCGGTATATAAGTGTTTTTGAGGGTTTCAAAGTTTTGAAACTCCCTTACAAACAAGGCCAAGATCCGAAGTGGTTCTCCATGTATGTGTTTCTTCCGAATGAAAGAGATGGGTTGCCAGCTTTAGTTGAGAGATTTTCTTCCGAGTCTGGGTTCTTAGATCGGCATCTTCCCCACAAAACAGTTGAAGTTGGTGTCTTTAAAATGCCAAAGTTCAAGTATTCTTGTAGATTTGAAGCTTCCAAAGTTCTGAAAACTTTAGGATTGGAGTTTCCTTTTGTTTCTGGAGGTTTGACAGAGATGGTGGACTCGCCTATGAGTGATAGCCTATATGTTTCCCACATACAACATGGATCATTCATTGATGTTAATGAGGACGGTACAGAAGCTGCTGCTGTTACGGTTGCTCTTCTAACGGGTTCAACTTGGAGTCAGGAGAAGAGGATAGACTTTGTGGCAGATCATCCCTTCCTTTTTCTTATCAGAGAAGAAACCACTGGATCGGTGCTGTTCATTGGGCAAGTCCTCAATCCAAATCCAATTGAAGACTGA

Protein Analysis

476

Amino Acids

53.48

Weight (kDa)

7.18

Isoelectric Point (pI)

37.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 88 - 470 3.8e-92 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 540
AciI CCGC 3 cut(s) 344, 504, 880
AclWI GGATC 5 cut(s) 161, 199, 935, 1237, 1384
AcoI YGGCCR 2 cut(s) 25, 58
AcsI RAATTY 2 cut(s) 49, 655
AfaI GTAC 2 cut(s) 338, 1258
AfeI AGCGCT 1 cut(s) 598
AfiI CCNNNNNNNGG 6 cut(s) 34, 70, 271, 400, 503, 1026
AhdI GACNNNNNGTC 1 cut(s) 681
AjnI CCWGG 1 cut(s) 706
AleI CACNNNNGTG 1 cut(s) 467
AluBI AGCT 9 cut(s) 298, 445, 450, 513, 831, 870, 998, 1115, 1265
AluI AGCT 9 cut(s) 298, 445, 450, 513, 831, 870, 998, 1115, 1265
Alw21I GWGCWC 2 cut(s) 447, 833
Alw26I GTCTC 2 cut(s) 552, 668
AlwI GGATC 5 cut(s) 161, 199, 935, 1237, 1384
AlwNI CAGNNNCTG 1 cut(s) 1265
Aor51HI AGCGCT 1 cut(s) 598
AoxI GGCC 6 cut(s) 25, 36, 58, 506, 663, 934
ApeKI GCWGC 6 cut(s) 5, 295, 377, 599, 1265, 1268
ApoI RAATTY 2 cut(s) 49, 655
Asp700I GAANNNNTTC 1 cut(s) 950
AspLEI GCGC 2 cut(s) 533, 599
AspS9I GGNCC 4 cut(s) 37, 403, 506, 663
AsuC2I CCSGG 1 cut(s) 382
AsuHPI GGTGA 4 cut(s) 406, 486, 514, 806
AvaII GGWCC 1 cut(s) 403
BanII GRGCYC 3 cut(s) 158, 447, 833
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 2 cut(s) 447, 833
BbvI GCAGC 6 cut(s) 17, 307, 389, 586, 1252, 1255
BccI CCATC 3 cut(s) 359, 980, 1171
BceAI ACGGC 1 cut(s) 12
BciT130I CCWGG 1 cut(s) 708
BcnI CCSGG 1 cut(s) 382
BcoDI GTCTC 2 cut(s) 552, 668
BfaI CTAG 3 cut(s) 455, 510, 729
BfoI RGCGCY 2 cut(s) 534, 600
BisI GCNGC 7 cut(s) 6, 296, 344, 378, 600, 1266, 1269
BlpI GCTNAGC 1 cut(s) 446
BlsI GCNGC 7 cut(s) 7, 297, 345, 379, 601, 1267, 1270
Bme1390I CCNGG 2 cut(s) 382, 708
Bme18I GGWCC 1 cut(s) 403
BmeRI GACNNNNNGTC 1 cut(s) 681
BmgT120I GGNCC 4 cut(s) 37, 403, 506, 663
BmrFI CCNGG 2 cut(s) 382, 708
BmsI GCATC 4 cut(s) 696, 775, 797, 1051
BpiI GAAGAC 1 cut(s) 780
BpmI CTGGAG 1 cut(s) 1182
Bpu1102I GCTNAGC 1 cut(s) 446
BpuEI CTTGAG 1 cut(s) 407
BpuMI CCSGG 1 cut(s) 382
BsaBI GATNNNNATC 1 cut(s) 1041
BsaJI CCNNGG 3 cut(s) 22, 209, 270
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 70, 271, 400, 503, 1026
Bse118I RCCGGY 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 406, 1378
Bse8I GATNNNNATC 1 cut(s) 1041
BseBI CCWGG 1 cut(s) 708
BseDI CCNNGG 3 cut(s) 22, 209, 270
BseGI GGATG 3 cut(s) 351, 640, 1339
BseJI GATNNNNATC 1 cut(s) 1041
BseLI CCNNNNNNNGG 6 cut(s) 34, 70, 271, 400, 503, 1026
BseMII CTCAG 3 cut(s) 379, 460, 846
BseNI ACTGG 2 cut(s) 406, 1378
BseRI GAGGAG 1 cut(s) 11
BseX3I CGGCCG 1 cut(s) 25
BseXI GCAGC 6 cut(s) 17, 307, 389, 586, 1252, 1255
BseYI CCCAGC 1 cut(s) 870
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 6 cut(s) 27, 38, 60, 508, 665, 936
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 2 cut(s) 447, 833
BsiSI CCGG 3 cut(s) 57, 71, 381
BslI CCNNNNNNNGG 6 cut(s) 34, 70, 271, 400, 503, 1026
BsmAI GTCTC 2 cut(s) 552, 668
BsnI GGCC 6 cut(s) 27, 38, 60, 508, 665, 936
Bsp1286I GDGCHC 3 cut(s) 158, 447, 833
Bsp143I GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
Bsp1720I GCTNAGC 1 cut(s) 446
BspACI CCGC 3 cut(s) 344, 504, 880
BspANI GGCC 6 cut(s) 27, 38, 60, 508, 665, 936
BspCNI CTCAG 3 cut(s) 378, 459, 845
BspHI TCATGA 2 cut(s) 288, 849
BspPI GGATC 5 cut(s) 161, 199, 935, 1237, 1384
BspQI GCTCTTC 1 cut(s) 1290
BsrFI RCCGGY 1 cut(s) 70
BsrI ACTGG 2 cut(s) 406, 1378
BssAI RCCGGY 1 cut(s) 70
BssECI CCNNGG 3 cut(s) 22, 209, 270
BssMI GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
Bst2UI CCWGG 1 cut(s) 708
Bst4CI ACNGT 4 cut(s) 65, 1060, 1256, 1279
Bst6I CTCTTC 3 cut(s) 555, 1290, 1310
BstC8I GCNNGC 2 cut(s) 506, 996
BstDEI CTNAG 5 cut(s) 365, 446, 712, 832, 1033
BstDSI CCRYGG 1 cut(s) 209
BstF5I GGATG 3 cut(s) 351, 640, 1339
BstH2I RGCGCY 2 cut(s) 534, 600
BstHHI GCGC 2 cut(s) 533, 599
BstKTI GATC 9 cut(s) 142, 169, 207, 218, 943, 1039, 1232, 1339, 1379
BstMAI GTCTC 2 cut(s) 552, 668
BstMBI GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 2 cut(s) 510, 596
BstNI CCWGG 1 cut(s) 708
BstSCI CCNGG 2 cut(s) 380, 706
BstV1I GCAGC 6 cut(s) 17, 307, 389, 586, 1252, 1255
BstV2I GAAGAC 1 cut(s) 780
BstX2I RGATCY 1 cut(s) 940
BstXI CCANNNNNNTGG 1 cut(s) 358
BstYI RGATCY 1 cut(s) 940
BstZI CGGCCG 1 cut(s) 25
BsuRI GGCC 6 cut(s) 27, 38, 60, 508, 665, 936
BtgI CCRYGG 1 cut(s) 209
BtsCI GGATG 3 cut(s) 351, 640, 1339
BtsI GCAGTG 1 cut(s) 585
BtsIMutI CAGTG 2 cut(s) 585, 1371
Cac8I GCNNGC 2 cut(s) 506, 996
CaiI CAGNNNCTG 1 cut(s) 1265
CciI TCATGA 2 cut(s) 288, 849
CfoI GCGC 2 cut(s) 533, 599
Cfr10I RCCGGY 1 cut(s) 70
Cfr13I GGNCC 4 cut(s) 37, 403, 506, 663
Csp6I GTAC 2 cut(s) 337, 1257
CviAII CATG 6 cut(s) 289, 358, 660, 850, 958, 1226
CviQI GTAC 2 cut(s) 337, 1257
DdeI CTNAG 5 cut(s) 365, 446, 712, 832, 1033
DpnI GATC 9 cut(s) 141, 168, 206, 217, 942, 1038, 1231, 1338, 1378
DpnII GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
DraI TTTAAA 2 cut(s) 760, 1078
DriI GACNNNNNGTC 1 cut(s) 681
EaeI YGGCCR 2 cut(s) 25, 58
EagI CGGCCG 1 cut(s) 25
Eam1104I CTCTTC 3 cut(s) 555, 1290, 1310
Eam1105I GACNNNNNGTC 1 cut(s) 681
EarI CTCTTC 3 cut(s) 555, 1290, 1310
Ecl136II GAGCTC 2 cut(s) 445, 831
EclXI CGGCCG 1 cut(s) 25
Eco24I GRGCYC 3 cut(s) 158, 447, 833
Eco47I GGWCC 1 cut(s) 403
Eco47III AGCGCT 1 cut(s) 598
Eco52I CGGCCG 1 cut(s) 25
Eco53kI GAGCTC 2 cut(s) 445, 831
EcoICRI GAGCTC 2 cut(s) 445, 831
EcoO109I RGGNCCY 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 655
EcoRII CCWGG 1 cut(s) 706
EcoT22I ATGCAT 2 cut(s) 751, 790
EcoT38I GRGCYC 3 cut(s) 158, 447, 833
FaeI CATG 6 cut(s) 292, 361, 663, 853, 961, 1229
FalI AAGNNNNNCTT 2 cut(s) 684, 716
FatI CATG 6 cut(s) 288, 357, 659, 849, 957, 1225
FauI CCCGC 1 cut(s) 497
FblI GTMKAC 1 cut(s) 540
Fnu4HI GCNGC 7 cut(s) 6, 296, 344, 378, 600, 1266, 1269
FokI GGATG 3 cut(s) 338, 647, 1326
FriOI GRGCYC 3 cut(s) 158, 447, 833
Fsp4HI GCNGC 7 cut(s) 6, 296, 344, 378, 600, 1266, 1269
FspBI CTAG 3 cut(s) 455, 510, 729
GlaI GCGC 2 cut(s) 532, 598
GluI GCNGC 7 cut(s) 6, 296, 344, 378, 600, 1266, 1269
GsaI CCCAGC 1 cut(s) 874
GsuI CTGGAG 1 cut(s) 1182
HaeII RGCGCY 2 cut(s) 534, 600
HaeIII GGCC 6 cut(s) 27, 38, 60, 508, 665, 936
HapII CCGG 3 cut(s) 57, 71, 381
HhaI GCGC 2 cut(s) 533, 599
Hin1II CATG 6 cut(s) 292, 361, 663, 853, 961, 1229
Hin6I GCGC 2 cut(s) 531, 597
HinP1I GCGC 2 cut(s) 531, 597
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HindIII AAGCTT 1 cut(s) 1113
HinfI GANTC 4 cut(s) 491, 1022, 1184, 1306
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 3 cut(s) 57, 71, 381
HphI GGTGA 4 cut(s) 406, 486, 514, 806
Hpy166II GTNNAC 7 cut(s) 32, 337, 435, 541, 583, 718, 1183
Hpy188I TCNGA 9 cut(s) 139, 166, 204, 634, 945, 975, 1021, 1128, 1361
Hpy188III TCNNGA 6 cut(s) 289, 792, 838, 850, 1161, 1310
Hpy8I GTNNAC 7 cut(s) 32, 337, 435, 541, 583, 718, 1183
HpyAV CCTTC 4 cut(s) 427, 664, 827, 1354
HpyCH4III ACNGT 4 cut(s) 65, 1060, 1256, 1279
HpyCH4V TGCA 2 cut(s) 749, 788
HpyF10VI GCNNNNNNNGC 2 cut(s) 510, 596
HpyF3I CTNAG 5 cut(s) 365, 446, 712, 832, 1033
Hsp92II CATG 6 cut(s) 292, 361, 663, 853, 961, 1229
HspAI GCGC 2 cut(s) 531, 597
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
LguI GCTCTTC 1 cut(s) 1290
LmnI GCTCC 3 cut(s) 709, 828, 867
Lsp1109I GCAGC 6 cut(s) 17, 307, 389, 586, 1252, 1255
LweI GCATC 4 cut(s) 696, 775, 797, 1051
MaeI CTAG 3 cut(s) 455, 510, 729
MaeIII GTNAC 2 cut(s) 146, 1273
MalI GATC 9 cut(s) 141, 168, 206, 217, 942, 1038, 1231, 1338, 1378
MboI GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
MboII GAAGA 9 cut(s) 45, 542, 785, 962, 1008, 1037, 1277, 1327, 1376
MfeI CAATTG 1 cut(s) 1416
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 3 cut(s) 158, 447, 833
MluCI AATT 3 cut(s) 49, 655, 1416
MlyI GAGTC 3 cut(s) 1031, 1178, 1315
MmeI TCCRAC 1 cut(s) 612
Mph1103I ATGCAT 2 cut(s) 751, 790
MroXI GAANNNNTTC 1 cut(s) 950
MseI TTAA 5 cut(s) 605, 717, 759, 1077, 1245
MslI CAYNNNNRTG 3 cut(s) 356, 467, 962
MspA1I CMGCKG 1 cut(s) 298
MspI CCGG 3 cut(s) 57, 71, 381
MspR9I CCNGG 2 cut(s) 382, 708
MunI CAATTG 1 cut(s) 1416
MvaI CCWGG 1 cut(s) 708
MwoI GCNNNNNNNGC 2 cut(s) 510, 596
NciI CCSGG 1 cut(s) 382
NdeII GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
NlaIII CATG 6 cut(s) 292, 361, 663, 853, 961, 1229
NmeAIII GCCGAG 1 cut(s) 691
NsiI ATGCAT 2 cut(s) 751, 790
OliI CACNNNNGTG 1 cut(s) 467
PagI TCATGA 2 cut(s) 288, 849
PciSI GCTCTTC 1 cut(s) 1290
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 1 cut(s) 491
PkrI GCNGC 7 cut(s) 7, 297, 345, 379, 601, 1267, 1270
PleI GAGTC 3 cut(s) 1030, 1178, 1314
PpsI GAGTC 3 cut(s) 1030, 1178, 1314
Psp124BI GAGCTC 2 cut(s) 447, 833
Psp6I CCWGG 1 cut(s) 706
PspFI CCCAGC 1 cut(s) 870
PspGI CCWGG 1 cut(s) 706
PspPI GGNCC 4 cut(s) 37, 403, 506, 663
PstNI CAGNNNCTG 1 cut(s) 1265
PsuI RGATCY 1 cut(s) 940
PvuII CAGCTG 1 cut(s) 298
RsaI GTAC 2 cut(s) 338, 1258
RsaNI GTAC 2 cut(s) 337, 1257
RseI CAYNNNNRTG 3 cut(s) 356, 467, 962
SacI GAGCTC 2 cut(s) 447, 833
SapI GCTCTTC 1 cut(s) 1290
SaqAI TTAA 5 cut(s) 605, 717, 759, 1077, 1245
SatI GCNGC 7 cut(s) 6, 296, 344, 378, 600, 1266, 1269
Sau3AI GATC 9 cut(s) 139, 166, 204, 215, 940, 1036, 1229, 1336, 1376
Sau96I GGNCC 4 cut(s) 37, 403, 506, 663
SchI GAGTC 3 cut(s) 1031, 1178, 1315
ScrFI CCNGG 2 cut(s) 382, 708
SduI GDGCHC 3 cut(s) 158, 447, 833
SfaNI GCATC 4 cut(s) 696, 775, 797, 1051
SinI GGWCC 1 cut(s) 403
SmiMI CAYNNNNRTG 3 cut(s) 356, 467, 962
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
Sse9I AATT 3 cut(s) 49, 655, 1416
SsiI CCGC 3 cut(s) 344, 504, 880
SspMI CTAG 3 cut(s) 455, 510, 729
SstI GAGCTC 2 cut(s) 447, 833
StyD4I CCNGG 2 cut(s) 380, 706
TaaI ACNGT 4 cut(s) 65, 1060, 1256, 1279
TaqI TCGA 1 cut(s) 615
TaqII GACCGA 1 cut(s) 284
TasI AATT 3 cut(s) 49, 655, 1416
TatI WGTACW 1 cut(s) 336
TauI GCSGC 1 cut(s) 346
TfiI GAWTC 1 cut(s) 491
Tru1I TTAA 5 cut(s) 605, 717, 759, 1077, 1245
Tru9I TTAA 5 cut(s) 605, 717, 759, 1077, 1245
TscAI CASTG 2 cut(s) 592, 1378
TseI GCWGC 6 cut(s) 5, 295, 377, 599, 1265, 1268
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 2 cut(s) 592, 1378
VpaK11BI GGWCC 1 cut(s) 403
XapI RAATTY 2 cut(s) 49, 655
XcmI CCANNNNNNNNNTGG 1 cut(s) 1223
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 3 cut(s) 455, 510, 729
Zsp2I ATGCAT 2 cut(s) 751, 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.