Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000163

Physical Location & Seq

Genomic Coordinates Reverse (-)

25288911 .. 25290332

Gene Structure 1422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18610

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGACAGCGTTTCGAAGCAGAACCCTAACTTCCTTGTTTAAGGTACATCGCTTTCCTCCTCTTTGCTTCACCTCTCTAATTCCCAGCAGAAATAACATTCAGACGCCAACAACAACCTGCTTCACCAAAACTCTATGCACCTCTCCTGCCCACCATGGAATTGGTTCTTCCTCTGATGAAGAGGAAATAGTGATTAATAAGCCTAAGGTAGAATACAGGAGAAATCAAACAAACATCGCACTCGGAATCACAAAGAAGCTGCTTCTGAACGAAGCCAAGGACTCAAACCTAGTATGCGCGCCGCTTTCCATTCAAGTAGTGCTCTCTCTTCTCAACTCTAAAACCAATTCCACCTTTGACGACCGTGCGTTGGCGTCCGAGCTCGCGGCTCGGGTGTTTGCAGATGGGTCCCAAAAAGGTGGGCCCCGCGTATCATGTGCCAATGGCCTCTGGGTGGACGAGTCAGTCCATCTGGAGCCTTCTCTGGAACAGGCAGTGGGCAGTGCCTACAACTCGGCTCTGCACCGAGTGGATTTCAAAACCGAATATGAGGAAGTGAGAACTAGAGTTAATTCATGGGTGGAAGAGGAGACTAACGGCCTCATCAAAGGTGTTCTTTCTCCGGGCTCAGTAAACAGCCTAACGAGGCTCCTATTTGCAAATGCATTGTACTTCAAAGGAGATTGGGCCGACAAGTTTGCTGCATCATTGACGAAAAAGTATGACTTCCACCTTCTCAATGGGAACCCAGTTAAGGCAGTGCCCTTCATGACCAGCTGCAGGGAGAGGCAGTACATAAGTGAATTTGATGGATTCAAAGTCTTAAAACTTCTGTACCGAACAGGAAAAGACAAGAGGCTGTATTCCATGTGCTTGTTTCTTCCGGATGCAAAAGATGGTCTGCCAGCTATGGTCGAGAGACTTAATTCTGAGTGTGGCTTAAGAAGCCACATTCCATATTCAAAACAAAGGGTGGGTGAGTTCAGAATTCCAAAGTTCAAGTTTTCTTTCGACTTTGCAGCTGCCCGTGTTCTTAAGGAGTTGGGACTTCTGGGAGGTTTGACAGAGGAGGTGAAATCACGCGTGGGTGAGCCACTATATATTCCCAGCATCTATCAGAAAGCCGTCATTGAAGTTAATGAGGAAGGCACCGAAGCTGCAGCTGTTACTTTCGGGGTGGAAATGTCTGCGGCTTCACCTTGTCCTCCCAAACCTAAAGTGATAGACTTTGTGGCTGATCACCCATTCATGTTCGTGATTAGAGAAGAAGTAACGGAAACAGTTCTGTTCATTGGTTATGTGCTCAATCCACTACTTAAGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009892 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0043086 GO:0044092 GO:0044421 GO:0044424 GO:0044464 GO:0045861 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko05146 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

441

Amino Acids

49.05

Weight (kDa)

8.58

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Serpin	PF00079	75 - 437	4e-73	Serpin (serine protease inhibitor)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000163)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64020
fragaria_vesca	FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica	MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica	Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis	pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis	RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata	RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora	Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii	Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa	Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha	Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana	Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	464
Acc36I	ACCTGC	1 cut(s)	125
AccB1I	GGYRCC	1 cut(s)	1148
AccII	CGCG	4 cut(s)	299, 386, 429, 1083
AccIII	TCCGGA	1 cut(s)	883
AciI	CCGC	4 cut(s)	302, 386, 427, 1190
AcsI	RAATTY	2 cut(s)	803, 987
AcyI	GRCGYC	2 cut(s)	104, 374
AdeI	CACNNNGTG	1 cut(s)	529
AfaI	GTAC	4 cut(s)	45, 671, 794, 836
AfiI	CCNNNNNNNGG	4 cut(s)	370, 454, 754, 780
AflII	CTTAAG	3 cut(s)	940, 1034, 1316
AflIII	ACRYGT	1 cut(s)	1081
AgsI	TTSAA	7 cut(s)	314, 538, 676, 817, 963, 1000, 1133
AluBI	AGCT	7 cut(s)	259, 382, 777, 908, 1022, 1157, 1163
AluI	AGCT	7 cut(s)	259, 382, 777, 908, 1022, 1157, 1163
Alw21I	GWGCWC	3 cut(s)	324, 384, 1305
Alw26I	GTCTC	2 cut(s)	584, 913
Ama87I	CYCGRG	1 cut(s)	390
Aor13HI	TCCGGA	1 cut(s)	883
AoxI	GGCC	4 cut(s)	422, 445, 598, 687
ApaI	GGGCCC	1 cut(s)	426
ApeKI	GCWGC	7 cut(s)	259, 701, 777, 1019, 1022, 1157, 1160
ApoI	RAATTY	2 cut(s)	803, 987
AseI	ATTAAT	1 cut(s)	195
Asp700I	GAANNNNTTC	2 cut(s)	163, 1281
AspLEI	GCGC	2 cut(s)	299, 301
AspS9I	GGNCC	4 cut(s)	408, 422, 423, 687
AsuC2I	CCSGG	1 cut(s)	624
AsuHPI	GGTGA	7 cut(s)	61, 115, 989, 1084, 1100, 1188, 1232
AsuII	TTCGAA	1 cut(s)	13
AvaI	CYCGRG	1 cut(s)	390
AvaII	GGWCC	1 cut(s)	408
AxyI	CCTNAGG	1 cut(s)	204
BaeGI	GKGCMC	2 cut(s)	426, 765
BaeI	ACNNNNGTAYC	2 cut(s)	818, 851
BanI	GGYRCC	1 cut(s)	1148
BanII	GRGCYC	3 cut(s)	384, 426, 629
Bbv12I	GWGCWC	3 cut(s)	324, 384, 1305
BbvI	GCAGC	7 cut(s)	246, 688, 764, 1009, 1031, 1144, 1172
BccI	CCATC	4 cut(s)	398, 477, 803, 890
BceAI	ACGGC	2 cut(s)	613, 1109
BcgI	CGANNNNNNTGC	2 cut(s)	680, 714
BclI	TGATCA	1 cut(s)	1237
BcnI	CCSGG	1 cut(s)	624
BcoDI	GTCTC	2 cut(s)	584, 913
BfaI	CTAG	2 cut(s)	290, 564
BfmI	CTRYAG	2 cut(s)	778, 1158
BfrI	CTTAAG	3 cut(s)	940, 1034, 1316
BfuAI	ACCTGC	1 cut(s)	125
Bme1390I	CCNGG	1 cut(s)	624
Bme18I	GGWCC	1 cut(s)	408
BmeT110I	CYCGRG	1 cut(s)	390
BmgT120I	GGNCC	4 cut(s)	408, 422, 423, 687
BmiI	GGNNCC	8 cut(s)	409, 410, 424, 425, 477, 650, 746, 1150
BmrFI	CCNGG	1 cut(s)	624
BmrI	ACTGGG	1 cut(s)	743
BmsI	GCATC	3 cut(s)	713, 877, 1119
BmuI	ACTGGG	1 cut(s)	743
BpmI	CTGGAG	1 cut(s)	494
Bpu14I	TTCGAA	1 cut(s)	13
BpuMI	CCSGG	1 cut(s)	624
BsaHI	GRCGYC	2 cut(s)	104, 374
BsaJI	CCNNGG	2 cut(s)	154, 276
BsaWI	WCCGGW	1 cut(s)	883
BsaXI	ACNNNNNCTCC	2 cut(s)	776, 806
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 454, 754, 780
Bse1I	ACTGG	1 cut(s)	749
Bse21I	CCTNAGG	1 cut(s)	204
BseAI	TCCGGA	1 cut(s)	883
BseDI	CCNNGG	2 cut(s)	154, 276
BseGI	GGATG	1 cut(s)	892
BseLI	CCNNNNNNNGG	4 cut(s)	370, 454, 754, 780
BseMII	CTCAG	2 cut(s)	642, 921
BseNI	ACTGG	1 cut(s)	749
BsePI	GCGCGC	1 cut(s)	297
BseRI	GAGGAG	3 cut(s)	48, 602, 1082
BseSI	GKGCMC	2 cut(s)	426, 765
BseXI	GCAGC	7 cut(s)	246, 688, 764, 1009, 1031, 1144, 1172
BseYI	CCCAGC	2 cut(s)	83, 1106
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	4 cut(s)	299, 386, 429, 1083
Bsh1285I	CGRYCG	1 cut(s)	364
BshFI	GGCC	4 cut(s)	424, 447, 600, 689
BshNI	GGYRCC	1 cut(s)	1148
BsiEI	CGRYCG	1 cut(s)	364
BsiHKAI	GWGCWC	3 cut(s)	324, 384, 1305
BsiHKCI	CYCGRG	1 cut(s)	390
BsiSI	CCGG	2 cut(s)	623, 884
BslFI	GGGAC	2 cut(s)	394, 1059
BslI	CCNNNNNNNGG	4 cut(s)	370, 454, 754, 780
BsmAI	GTCTC	2 cut(s)	584, 913
BsmFI	GGGAC	2 cut(s)	394, 1059
BsnI	GGCC	4 cut(s)	424, 447, 600, 689
BsoBI	CYCGRG	1 cut(s)	390
Bsp119I	TTCGAA	1 cut(s)	13
Bsp120I	GGGCCC	1 cut(s)	422
Bsp1286I	GDGCHC	6 cut(s)	324, 384, 426, 629, 765, 1305
Bsp13I	TCCGGA	1 cut(s)	883
Bsp143I	GATC	1 cut(s)	1237
Bsp19I	CCATGG	1 cut(s)	154
BspACI	CCGC	4 cut(s)	302, 386, 427, 1190
BspANI	GGCC	4 cut(s)	424, 447, 600, 689
BspCNI	CTCAG	2 cut(s)	641, 922
BspEI	TCCGGA	1 cut(s)	883
BspFNI	CGCG	4 cut(s)	299, 386, 429, 1083
BspHI	TCATGA	1 cut(s)	768
BspLI	GGNNCC	8 cut(s)	409, 410, 424, 425, 477, 650, 746, 1150
BspMAI	CTGCAG	2 cut(s)	782, 1162
BspMI	ACCTGC	1 cut(s)	125
BspT104I	TTCGAA	1 cut(s)	13
BspT107I	GGYRCC	1 cut(s)	1148
BspTI	CTTAAG	3 cut(s)	940, 1034, 1316
BsrI	ACTGG	1 cut(s)	749
BssECI	CCNNGG	2 cut(s)	154, 276
BssHII	GCGCGC	1 cut(s)	297
BssMI	GATC	1 cut(s)	1237
BssNI	GRCGYC	2 cut(s)	104, 374
BssT1I	CCWWGG	2 cut(s)	154, 276
Bst4CI	ACNGT	2 cut(s)	365, 1282
Bst6I	CTCTTC	3 cut(s)	174, 333, 579
BstACI	GRCGYC	2 cut(s)	104, 374
BstAFI	CTTAAG	3 cut(s)	940, 1034, 1316
BstBI	TTCGAA	1 cut(s)	13
BstC8I	GCNNGC	3 cut(s)	299, 384, 906
BstDEI	CTNAG	3 cut(s)	204, 628, 930
BstDSI	CCRYGG	1 cut(s)	154
BstF5I	GGATG	1 cut(s)	892
BstFNI	CGCG	4 cut(s)	299, 386, 429, 1083
BstHHI	GCGC	2 cut(s)	299, 301
BstKTI	GATC	1 cut(s)	1240
BstMAI	GTCTC	2 cut(s)	584, 913
BstMBI	GATC	1 cut(s)	1237
BstMCI	CGRYCG	1 cut(s)	364
BstMWI	GCNNNNNNNGC	1 cut(s)	945
BstSCI	CCNGG	1 cut(s)	622
BstSFI	CTRYAG	2 cut(s)	778, 1158
BstSLI	GKGCMC	2 cut(s)	426, 765
BstUI	CGCG	4 cut(s)	299, 386, 429, 1083
BstV1I	GCAGC	7 cut(s)	246, 688, 764, 1009, 1031, 1144, 1172
BstXI	CCANNNNNNTGG	2 cut(s)	161, 419
Bsu36I	CCTNAGG	1 cut(s)	204
BsuRI	GGCC	4 cut(s)	424, 447, 600, 689
BtgI	CCRYGG	1 cut(s)	154
BtgZI	GCGATG	2 cut(s)	32, 220
BtsCI	GGATG	1 cut(s)	892
BtsI	GCAGTG	3 cut(s)	501, 508, 765
BtsIMutI	CAGTG	3 cut(s)	501, 508, 765
BveI	ACCTGC	1 cut(s)	125
Cac8I	GCNNGC	3 cut(s)	299, 384, 906
CciI	TCATGA	1 cut(s)	768
CfoI	GCGC	2 cut(s)	299, 301
Cfr13I	GGNCC	4 cut(s)	408, 422, 423, 687
CseI	GACGC	2 cut(s)	112, 363
Csp6I	GTAC	4 cut(s)	44, 670, 793, 835
CviAII	CATG	6 cut(s)	155, 435, 576, 769, 868, 1249
CviQI	GTAC	4 cut(s)	44, 670, 793, 835
DdeI	CTNAG	3 cut(s)	204, 628, 930
DpnI	GATC	1 cut(s)	1239
DpnII	GATC	1 cut(s)	1237
DraIII	CACNNNGTG	1 cut(s)	529
DrdI	GACNNNNNNGTC	1 cut(s)	464
DseDI	GACNNNNNNGTC	1 cut(s)	464
Eam1104I	CTCTTC	3 cut(s)	174, 333, 579
EarI	CTCTTC	3 cut(s)	174, 333, 579
Ecl136II	GAGCTC	1 cut(s)	382
Eco130I	CCWWGG	2 cut(s)	154, 276
Eco24I	GRGCYC	3 cut(s)	384, 426, 629
Eco47I	GGWCC	1 cut(s)	408
Eco53kI	GAGCTC	1 cut(s)	382
Eco81I	CCTNAGG	1 cut(s)	204
Eco88I	CYCGRG	1 cut(s)	390
EcoICRI	GAGCTC	1 cut(s)	382
EcoO109I	RGGNCCY	2 cut(s)	408, 423
EcoRI	GAATTC	1 cut(s)	987
EcoT14I	CCWWGG	2 cut(s)	154, 276
EcoT22I	ATGCAT	1 cut(s)	667
EcoT38I	GRGCYC	3 cut(s)	384, 426, 629
ErhI	CCWWGG	2 cut(s)	154, 276
FaeI	CATG	6 cut(s)	158, 438, 579, 772, 871, 1252
FalI	AAGNNNNNCTT	4 cut(s)	600, 632, 710, 742
FaqI	GGGAC	2 cut(s)	394, 1059
FatI	CATG	6 cut(s)	154, 434, 575, 768, 867, 1248
FauI	CCCGC	1 cut(s)	434
FbaI	TGATCA	1 cut(s)	1237
FokI	GGATG	1 cut(s)	899
FriOI	GRGCYC	3 cut(s)	384, 426, 629
FspBI	CTAG	2 cut(s)	290, 564
GlaI	GCGC	2 cut(s)	298, 300
GsaI	CCCAGC	2 cut(s)	87, 1110
GsuI	CTGGAG	1 cut(s)	494
HaeIII	GGCC	4 cut(s)	424, 447, 600, 689
HapII	CCGG	2 cut(s)	623, 884
HgaI	GACGC	2 cut(s)	112, 363
HhaI	GCGC	2 cut(s)	299, 301
Hin1I	GRCGYC	2 cut(s)	104, 374
Hin1II	CATG	6 cut(s)	158, 438, 579, 772, 871, 1252
Hin6I	GCGC	2 cut(s)	297, 299
HinP1I	GCGC	2 cut(s)	297, 299
HinfI	GANTC	4 cut(s)	246, 281, 461, 813
HpaII	CCGG	2 cut(s)	623, 884
HphI	GGTGA	7 cut(s)	61, 115, 989, 1084, 1100, 1188, 1232
Hpy166II	GTNNAC	2 cut(s)	457, 634
Hpy188I	TCNGA	8 cut(s)	102, 175, 245, 267, 379, 931, 986, 1119
Hpy188III	TCNNGA	6 cut(s)	473, 485, 769, 884, 916, 1255
Hpy8I	GTNNAC	2 cut(s)	457, 634
HpyAV	CCTTC	4 cut(s)	489, 743, 775, 1139
HpyCH4III	ACNGT	2 cut(s)	365, 1282
HpyF10VI	GCNNNNNNNGC	1 cut(s)	945
HpyF3I	CTNAG	3 cut(s)	204, 628, 930
Hsp92I	GRCGYC	2 cut(s)	104, 374
Hsp92II	CATG	6 cut(s)	158, 438, 579, 772, 871, 1252
HspAI	GCGC	2 cut(s)	297, 299
KflI	GGGWCCC	1 cut(s)	408
Kpn2I	TCCGGA	1 cut(s)	883
Ksp22I	TGATCA	1 cut(s)	1237
Kzo9I	GATC	1 cut(s)	1237
LmnI	GCTCC	2 cut(s)	475, 654
Lsp1109I	GCAGC	7 cut(s)	246, 688, 764, 1009, 1031, 1144, 1172
LweI	GCATC	3 cut(s)	713, 877, 1119
MaeI	CTAG	2 cut(s)	290, 564
MaeIII	GTNAC	2 cut(s)	1165, 1270
MalI	GATC	1 cut(s)	1239
MboI	GATC	1 cut(s)	1237
MboII	GAAGA	6 cut(s)	159, 191, 320, 596, 872, 1277
MhlI	GDGCHC	6 cut(s)	324, 384, 426, 629, 765, 1305
MluCI	AATT	7 cut(s)	78, 159, 346, 571, 803, 925, 987
MluI	ACGCGT	1 cut(s)	1081
MlyI	GAGTC	2 cut(s)	275, 470
Mph1103I	ATGCAT	1 cut(s)	667
MroI	TCCGGA	1 cut(s)	883
MroXI	GAANNNNTTC	2 cut(s)	163, 1281
MslI	CAYNNNNRTG	1 cut(s)	1253
MspA1I	CMGCKG	3 cut(s)	777, 1022, 1163
MspCI	CTTAAG	3 cut(s)	940, 1034, 1316
MspI	CCGG	2 cut(s)	623, 884
MspR9I	CCNGG	1 cut(s)	624
MvnI	CGCG	4 cut(s)	299, 386, 429, 1083
MwoI	GCNNNNNNNGC	1 cut(s)	945
NciI	CCSGG	1 cut(s)	624
NcoI	CCATGG	1 cut(s)	154
NdeII	GATC	1 cut(s)	1237
NlaIII	CATG	6 cut(s)	158, 438, 579, 772, 871, 1252
NlaIV	GGNNCC	8 cut(s)	409, 410, 424, 425, 477, 650, 746, 1150
NmeAIII	GCCGAG	1 cut(s)	494
NsiI	ATGCAT	1 cut(s)	667
NspV	TTCGAA	1 cut(s)	13
PagI	TCATGA	1 cut(s)	768
PauI	GCGCGC	1 cut(s)	297
PdmI	GAANNNNTTC	2 cut(s)	163, 1281
PfeI	GAWTC	2 cut(s)	246, 813
PleI	GAGTC	2 cut(s)	275, 469
PpsI	GAGTC	2 cut(s)	275, 469
PpuMI	RGGWCCY	1 cut(s)	408
PshBI	ATTAAT	1 cut(s)	195
Psp124BI	GAGCTC	1 cut(s)	384
Psp5II	RGGWCCY	1 cut(s)	408
PspFI	CCCAGC	2 cut(s)	83, 1106
PspN4I	GGNNCC	8 cut(s)	409, 410, 424, 425, 477, 650, 746, 1150
PspOMI	GGGCCC	1 cut(s)	422
PspPI	GGNCC	4 cut(s)	408, 422, 423, 687
PspPPI	RGGWCCY	1 cut(s)	408
PstI	CTGCAG	2 cut(s)	782, 1162
PteI	GCGCGC	1 cut(s)	297
PvuII	CAGCTG	3 cut(s)	777, 1022, 1163
RsaI	GTAC	4 cut(s)	45, 671, 794, 836
RsaNI	GTAC	4 cut(s)	44, 670, 793, 835
RseI	CAYNNNNRTG	1 cut(s)	1253
SacI	GAGCTC	1 cut(s)	384
Sau3AI	GATC	1 cut(s)	1237
Sau96I	GGNCC	4 cut(s)	408, 422, 423, 687
SchI	GAGTC	2 cut(s)	275, 470
ScrFI	CCNGG	1 cut(s)	624
SduI	GDGCHC	6 cut(s)	324, 384, 426, 629, 765, 1305
SfaNI	GCATC	3 cut(s)	713, 877, 1119
SfcI	CTRYAG	2 cut(s)	778, 1158
SfuI	TTCGAA	1 cut(s)	13
SinI	GGWCC	1 cut(s)	408
SmiMI	CAYNNNNRTG	1 cut(s)	1253
SmlI	CTYRAG	3 cut(s)	940, 1034, 1316
SmoI	CTYRAG	3 cut(s)	940, 1034, 1316
Sse9I	AATT	7 cut(s)	78, 159, 346, 571, 803, 925, 987
SsiI	CCGC	4 cut(s)	302, 386, 427, 1190
SspMI	CTAG	2 cut(s)	290, 564
SstI	GAGCTC	1 cut(s)	384
StyD4I	CCNGG	1 cut(s)	622
StyI	CCWWGG	2 cut(s)	154, 276
TaaI	ACNGT	2 cut(s)	365, 1282
TaqI	TCGA	3 cut(s)	13, 915, 1011
TasI	AATT	7 cut(s)	78, 159, 346, 571, 803, 925, 987
TatI	WGTACW	2 cut(s)	669, 792
TauI	GCSGC	3 cut(s)	304, 389, 1193
TfiI	GAWTC	2 cut(s)	246, 813
TscAI	CASTG	3 cut(s)	501, 508, 765
TseI	GCWGC	7 cut(s)	259, 701, 777, 1019, 1022, 1157, 1160
TspDTI	ATGAA	5 cut(s)	192, 564, 757, 1237, 1279
TspGWI	ACGGA	1 cut(s)	1289
TspRI	CASTG	3 cut(s)	501, 508, 765
Vha464I	CTTAAG	3 cut(s)	940, 1034, 1316
VpaK11BI	GGWCC	1 cut(s)	408
VspI	ATTAAT	1 cut(s)	195
XapI	RAATTY	2 cut(s)	803, 987
XcmI	CCANNNNNNNNNTGG	2 cut(s)	158, 737
XmnI	GAANNNNTTC	2 cut(s)	163, 1281
XspI	CTAG	2 cut(s)	290, 564
Zsp2I	ATGCAT	1 cut(s)	667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.