MD04G1136400.v1.1

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
22406766 .. 22410505
3740 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1136400.v1.1.491

Sequence Viewer

Length: 312 bp
ATGGTCAATTCCAAGACCAAGGCTGAAGAAGCAAGAATTAAAGTCAATTTGTGGGCTGAAAATGTGACTAAGGGCCTCATCAAAGAGGTTCTTCCTCCAAATTCAGTTCAGTCTGTTGAGCAAAAATTGTACATAATATGGTCTCCTCCCTTGTTTCCGTGTCCTCCCCTTTGCTTTGGTTCGATGCCTTTTTATAGGCGAACAGTGGACATGGCAGTTGAAGTTAGTGGGATGCAACTTTCCTGGGGTGTGGAGATGCTGAGAGAAAACCATCTCTTGAGTGGAGAACGTGGGAGTTTTAGAGGGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.7

Weight (kDa)

8.68

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 100
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 1 cut(s) 131
AgsI TTSAA 1 cut(s) 221
AjnI CCWGG 1 cut(s) 242
Alw26I GTCTC 1 cut(s) 147
AoxI GGCC 1 cut(s) 73
ApoI RAATTY 1 cut(s) 100
AspS9I GGNCC 1 cut(s) 73
BccI CCATC 1 cut(s) 279
BciT130I CCWGG 1 cut(s) 244
BcoDI GTCTC 1 cut(s) 147
BfaI CTAG 1 cut(s) 310
Bme1390I CCNGG 1 cut(s) 244
BmgT120I GGNCC 1 cut(s) 73
BmrFI CCNGG 1 cut(s) 244
BmsI GCATC 3 cut(s) 174, 222, 246
BpuEI CTTGAG 1 cut(s) 298
BsaI GGTCTC 1 cut(s) 147
BsaJI CCNNGG 2 cut(s) 18, 243
BseBI CCWGG 1 cut(s) 244
BseDI CCNNGG 2 cut(s) 18, 243
BseGI GGATG 1 cut(s) 237
BseMII CTCAG 1 cut(s) 251
BseRI GAGGAG 1 cut(s) 135
BshFI GGCC 1 cut(s) 75
BsmAI GTCTC 1 cut(s) 147
BsnI GGCC 1 cut(s) 75
Bso31I GGTCTC 1 cut(s) 147
Bsp1407I TGTACA 1 cut(s) 129
BspANI GGCC 1 cut(s) 75
BspCNI CTCAG 1 cut(s) 252
BspTNI GGTCTC 1 cut(s) 147
BsrGI TGTACA 1 cut(s) 129
BssECI CCNNGG 2 cut(s) 18, 243
BssT1I CCWWGG 1 cut(s) 18
Bst2UI CCWGG 1 cut(s) 244
Bst4CI ACNGT 1 cut(s) 205
BstAUI TGTACA 1 cut(s) 129
BstDEI CTNAG 2 cut(s) 69, 260
BstF5I GGATG 1 cut(s) 237
BstMAI GTCTC 1 cut(s) 147
BstMWI GCNNNNNNNGC 1 cut(s) 29
BstNI CCWGG 1 cut(s) 244
BstSCI CCNGG 1 cut(s) 242
BsuRI GGCC 1 cut(s) 75
BtsCI GGATG 1 cut(s) 237
BtsIMutI CAGTG 1 cut(s) 210
Cfr13I GGNCC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 130
CviAII CATG 1 cut(s) 211
CviJI RGCY 3 cut(s) 23, 56, 75
CviKI_1 RGCY 3 cut(s) 23, 56, 75
CviQI GTAC 1 cut(s) 130
DdeI CTNAG 2 cut(s) 69, 260
Eco130I CCWWGG 1 cut(s) 18
Eco31I GGTCTC 1 cut(s) 147
Eco57I CTGAAG 1 cut(s) 45
EcoO109I RGGNCCY 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 242
EcoT14I CCWWGG 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 1 cut(s) 214
FaiI YATR 4 cut(s) 134, 139, 195, 212
FalI AAGNNNNNCTT 2 cut(s) 75, 107
FatI CATG 1 cut(s) 210
FokI GGATG 1 cut(s) 244
FspBI CTAG 1 cut(s) 310
HaeIII GGCC 1 cut(s) 75
Hin1II CATG 1 cut(s) 214
Hpy166II GTNNAC 1 cut(s) 208
Hpy188III TCNNGA 1 cut(s) 277
Hpy8I GTNNAC 1 cut(s) 208
HpyCH4III ACNGT 1 cut(s) 205
HpyCH4IV ACGT 1 cut(s) 289
HpyCH4V TGCA 1 cut(s) 235
HpyF10VI GCNNNNNNNGC 1 cut(s) 29
HpyF3I CTNAG 2 cut(s) 69, 260
HpySE526I ACGT 1 cut(s) 289
Hsp92II CATG 1 cut(s) 214
LpnPI CCDG 2 cut(s) 229, 256
LweI GCATC 3 cut(s) 174, 222, 246
MaeI CTAG 1 cut(s) 310
MaeII ACGT 1 cut(s) 289
MaeIII GTNAC 1 cut(s) 64
MboII GAAGA 2 cut(s) 38, 83
MluCI AATT 5 cut(s) 7, 36, 46, 100, 125
MnlI CCTC 6 cut(s) 79, 86, 105, 156, 174, 296
MseI TTAA 1 cut(s) 39
MspR9I CCNGG 1 cut(s) 244
MvaI CCWGG 1 cut(s) 244
MwoI GCNNNNNNNGC 1 cut(s) 29
NlaIII CATG 1 cut(s) 214
NmuCI GTSAC 1 cut(s) 64
Psp6I CCWGG 1 cut(s) 242
PspGI CCWGG 1 cut(s) 242
PspPI GGNCC 1 cut(s) 73
RsaI GTAC 1 cut(s) 131
RsaNI GTAC 1 cut(s) 130
SaqAI TTAA 1 cut(s) 39
Sau96I GGNCC 1 cut(s) 73
ScrFI CCNGG 1 cut(s) 244
SetI ASST 2 cut(s) 90, 292
SfaNI GCATC 3 cut(s) 174, 222, 246
SmlI CTYRAG 1 cut(s) 277
SmoI CTYRAG 1 cut(s) 277
Sse9I AATT 5 cut(s) 7, 36, 46, 100, 125
SspMI CTAG 1 cut(s) 310
StyD4I CCNGG 1 cut(s) 242
StyI CCWWGG 1 cut(s) 18
TaaI ACNGT 1 cut(s) 205
TaiI ACGT 1 cut(s) 292
TaqI TCGA 1 cut(s) 182
TasI AATT 5 cut(s) 7, 36, 46, 100, 125
TatI WGTACW 1 cut(s) 129
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TscAI CASTG 1 cut(s) 210
TseFI GTSAC 1 cut(s) 64
Tsp45I GTSAC 1 cut(s) 64
TspGWI ACGGA 1 cut(s) 147
TspRI CASTG 1 cut(s) 210
XapI RAATTY 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 278
XspI CTAG 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.