MD10G1229300.v1.1

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000163
Physical Location & Seq
Reverse (-)
32625894 .. 32627390
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1229300.v1.1.491

Sequence Viewer

Length: 1497 bp
ATGAAGGTGGAAGCTGCATACTTGTTGGCCGTTTTGGGGGGCAAGACCTCCCCTTCTGCCGAAGATCTCAAGGACATCCTTGGCTCTGTCGGCGCTGAGGCTGATGATGACAGGATTCAACTTCTTCTTTCCGAAGTCGAGAGTAAAGACATCACAGAGCTTATTGCGTCTGGACGGGAAAAGTTGGCCTCCTCCGTACCATCTGGTTGTGGTGATGCTATTGCAGTTGATAAAACTGGTGACGGCTTCGGTGGTATCGCTGCTCCTGCTACAGCTGGGGCAGACGACGAAGCCAACGAGTCATTTCCCTTCTCGGATTGTGATCCCGACAGTTTCACCATGGATCCCAAAGAAGCCAGCAACCTAACCGATGTCAGTCTCAAAATTACTACTCATCTGCTCGTAACAGAAGGCAAGTCGAAGAACATTGTTTACTCGCCGTTATCCATCCAGGTTATGTTGTGGCTAATAACGGCCGGGTCAAAGGGTCCTACCCAAGACCAGATGCTCTCTTTCCTCAAGTCGAACTCCGTCGACCAACTGAACTCCCTGGCCTCCCATCTTGTCCCTCTGGTCTTCGCAAACGGATCTGCCAGAGGCGGTCCTTGCCTATGTTTTGCCAATGGCCTTTGGGTTAAGAAGTCTCTCCTCATCAAACCTGCTTTCAAACAGGTTGTGGACAGTGCTTACAAGGCAACTATAAAACAAGTTAGTTTCAAGAATCCTGAAGAAGTGAGACGTGAAGTGAACTTATGGGCTGAAAAGGCGACGATCACTGAGGCTCTTCCTCCTGAGTCGATTGACAAGAAGACCATGCTTGTAATTTCAAATGCCTTATACTTCAAAGGCCTTTGGAAGGACAAGTTCAAAGCATCGAAAACAAAAGAGTACGACTTCCACCTTATCAACGGTACTTCTGTTAAGGCACAGTTCATGACGAGTGACGAGGACCAGTTTGTAAAAGCCTTTGACGGCTTCAAAGTCTTGAAGCTTCATTACGCACGAGGCAAAGACAGGAGGCGGAAATTTTCAATGTACTTGTTGCTTCCAAATACAAGAGATGGGCTCCCAAGTTTGGTTGAGAGAGTTTGTACGGAGCCCAATTTCTTAGATCGATATTGCCCCGAAACACAAGTGGAAGTTGGTGACTTCAAAGTCCCAAGGTTTAAGTTTTCCTCTTCCTTTAAAGCATCTGATATCCTCAAGGATTTAGGATTGGTGTTGCCTTTCAATGGTGAAGGTGATTTAACAGAGATGGTGGAATCATCTCCAGATGGGGCCACCATGTTTCATAAATCCTTCATTGAAGTTAATGAAGAAGGGACAGAAGCAGCGGCTGTTTCTAGTTATGTAGATATGTATTTCTCTTATGGTCCTCTAAGTCCTCGCAAAAAGATAGACTTTGTGGCTGACCACCCGTTCATGTTTTTTATCAGAGAGGAAAAGACTGAAACGGTTATGTTCATTGGTCAAGTTCTCAATCCGCTCGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

499

Amino Acids

54.82

Weight (kDa)

5.15

Isoelectric Point (pI)

31.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_60s PF00428 17 - 99 1.1e-08 60s Acidic ribosomal protein
Serpin PF00079 122 - 495 6.4e-86 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1154
Acc36I ACCTGC 1 cut(s) 667
AccBSI CCGCTC 1 cut(s) 1486
AccI GTMKAC 1 cut(s) 534
AciI CCGC 4 cut(s) 600, 1021, 1334, 1484
AclWI GGATC 4 cut(s) 317, 338, 351, 595
AcoI YGGCCR 2 cut(s) 27, 474
AcsI RAATTY 1 cut(s) 1025
AcuI CTGAAG 1 cut(s) 747
AfaI GTAC 5 cut(s) 198, 890, 913, 1037, 1093
AfiI CCNNNNNNNGG 4 cut(s) 36, 856, 1075, 1232
AjiI CACGTC 1 cut(s) 740
AjnI CCWGG 2 cut(s) 450, 549
AluBI AGCT 4 cut(s) 14, 160, 275, 991
AluI AGCT 4 cut(s) 14, 160, 275, 991
Alw26I GTCTC 3 cut(s) 383, 648, 730
AlwI GGATC 4 cut(s) 317, 338, 351, 595
AlwNI CAGNNNCTG 1 cut(s) 1337
AoxI GGCC 7 cut(s) 27, 186, 474, 552, 625, 847, 1278
ApeKI GCWGC 3 cut(s) 14, 260, 1331
ApoI RAATTY 1 cut(s) 1025
AspLEI GCGC 1 cut(s) 95
AspS9I GGNCC 5 cut(s) 488, 602, 949, 1278, 1373
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 6 cut(s) 224, 251, 328, 1157, 1247, 1253
AvaII GGWCC 4 cut(s) 488, 602, 949, 1373
BaeI ACNNNNGTAYC 2 cut(s) 903, 936
BamHI GGATCC 1 cut(s) 343
BanII GRGCYC 2 cut(s) 1068, 1101
BarI GAAGNNNNNNTAC 2 cut(s) 980, 1012
BauI CACGAG 1 cut(s) 1002
BbsI GAAGAC 2 cut(s) 568, 815
BbvCI CCTCAGC 1 cut(s) 96
BbvI GCAGC 2 cut(s) 247, 1343
BccI CCATC 6 cut(s) 208, 455, 567, 1055, 1249, 1268
BceAI ACGGC 5 cut(s) 14, 259, 424, 489, 988
BciT130I CCWGG 2 cut(s) 452, 551
BcnI CCSGG 1 cut(s) 478
BcoDI GTCTC 3 cut(s) 383, 648, 730
BfaI CTAG 1 cut(s) 1344
BfmI CTRYAG 1 cut(s) 270
BfoI RGCGCY 1 cut(s) 96
BfuAI ACCTGC 1 cut(s) 667
BglII AGATCT 1 cut(s) 64
BisI GCNGC 4 cut(s) 15, 261, 1332, 1335
BlsI GCNGC 4 cut(s) 16, 262, 1333, 1336
Bme1390I CCNGG 3 cut(s) 452, 478, 551
Bme18I GGWCC 4 cut(s) 488, 602, 949, 1373
BmgBI CACGTC 1 cut(s) 740
BmgT120I GGNCC 5 cut(s) 488, 602, 949, 1278, 1373
BmiI GGNNCC 5 cut(s) 345, 489, 1067, 1098, 1279
BmrFI CCNGG 3 cut(s) 452, 478, 551
BmsI GCATC 4 cut(s) 205, 495, 881, 1199
BpiI GAAGAC 2 cut(s) 568, 815
BplI GAGNNNNNCTC 2 cut(s) 1050, 1082
BpmI CTGGAG 1 cut(s) 1254
Bpu10I CCTNAGC 1 cut(s) 96
BpuEI CTTGAG 3 cut(s) 53, 503, 1187
BpuMI CCSGG 1 cut(s) 478
Bsa29I ATCGAT 1 cut(s) 1114
BsaBI GATNNNNATC 1 cut(s) 321
BsaJI CCNNGG 4 cut(s) 79, 339, 549, 1160
Bsc4I CCNNNNNNNGG 4 cut(s) 36, 856, 1075, 1232
Bse1I ACTGG 2 cut(s) 241, 952
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 2 cut(s) 452, 551
BseCI ATCGAT 1 cut(s) 1114
BseDI CCNNGG 4 cut(s) 79, 339, 549, 1160
BseGI GGATG 2 cut(s) 75, 447
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 4 cut(s) 36, 856, 1075, 1232
BseMII CTCAG 3 cut(s) 87, 768, 783
BseNI ACTGG 2 cut(s) 241, 952
BseRI GAGGAG 2 cut(s) 181, 638
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 2 cut(s) 247, 1343
BseYI CCCAGC 1 cut(s) 275
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 7 cut(s) 29, 188, 476, 554, 627, 849, 1280
BshVI ATCGAT 1 cut(s) 1114
BsiEI CGRYCG 1 cut(s) 477
BsiSI CCGG 1 cut(s) 477
BslFI GGGAC 3 cut(s) 551, 1142, 1336
BslI CCNNNNNNNGG 4 cut(s) 36, 856, 1075, 1232
BsmAI GTCTC 3 cut(s) 383, 648, 730
BsmBI CGTCTC 1 cut(s) 730
BsmFI GGGAC 3 cut(s) 551, 1142, 1336
BsnI GGCC 7 cut(s) 29, 188, 476, 554, 627, 849, 1280
Bsp1286I GDGCHC 2 cut(s) 1068, 1101
Bsp143I GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
Bsp19I CCATGG 1 cut(s) 339
BspACI CCGC 4 cut(s) 600, 1021, 1334, 1484
BspANI GGCC 7 cut(s) 29, 188, 476, 554, 627, 849, 1280
BspCNI CTCAG 3 cut(s) 88, 769, 784
BspDI ATCGAT 1 cut(s) 1114
BspHI TCATGA 1 cut(s) 933
BspLI GGNNCC 5 cut(s) 345, 489, 1067, 1098, 1279
BspMI ACCTGC 1 cut(s) 667
BspPI GGATC 4 cut(s) 317, 338, 351, 595
BspQI GCTCTTC 1 cut(s) 789
BsrBI CCGCTC 1 cut(s) 1486
BsrI ACTGG 2 cut(s) 241, 952
BssECI CCNNGG 4 cut(s) 79, 339, 549, 1160
BssMI GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
BssSI CACGAG 1 cut(s) 1002
BssT1I CCWWGG 3 cut(s) 79, 339, 1160
Bst2BI CACGAG 1 cut(s) 1002
Bst2UI CCWGG 2 cut(s) 452, 551
Bst4CI ACNGT 5 cut(s) 332, 683, 911, 930, 1456
Bst6I CTCTTC 2 cut(s) 789, 1183
BstC8I GCNNGC 1 cut(s) 358
BstDEI CTNAG 5 cut(s) 96, 777, 792, 1108, 1379
BstDSI CCRYGG 1 cut(s) 339
BstENI CCTNNNNNAGG 1 cut(s) 854
BstF5I GGATG 2 cut(s) 75, 447
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 1 cut(s) 95
BstKTI GATC 6 cut(s) 67, 325, 346, 590, 774, 1114
BstMAI GTCTC 3 cut(s) 383, 648, 730
BstMBI GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 5 cut(s) 90, 266, 606, 692, 764
BstNI CCWGG 2 cut(s) 452, 551
BstSCI CCNGG 3 cut(s) 450, 476, 549
BstSFI CTRYAG 1 cut(s) 270
BstV1I GCAGC 2 cut(s) 247, 1343
BstV2I GAAGAC 2 cut(s) 568, 815
BstX2I RGATCY 3 cut(s) 64, 343, 587
BstYI RGATCY 3 cut(s) 64, 343, 587
BstZI CGGCCG 1 cut(s) 474
Bsu15I ATCGAT 1 cut(s) 1114
BsuRI GGCC 7 cut(s) 29, 188, 476, 554, 627, 849, 1280
BsuTUI ATCGAT 1 cut(s) 1114
BtgI CCRYGG 1 cut(s) 339
BtrI CACGTC 1 cut(s) 740
BtsCI GGATG 2 cut(s) 75, 447
BtsIMutI CAGTG 2 cut(s) 688, 774
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 1 cut(s) 358
CaiI CAGNNNCTG 1 cut(s) 1337
CciI TCATGA 1 cut(s) 933
CfoI GCGC 1 cut(s) 95
Cfr13I GGNCC 5 cut(s) 488, 602, 949, 1278, 1373
ClaI ATCGAT 1 cut(s) 1114
CseI GACGC 1 cut(s) 156
Csp6I GTAC 5 cut(s) 197, 889, 912, 1036, 1092
CviAII CATG 5 cut(s) 340, 814, 934, 1285, 1423
CviQI GTAC 5 cut(s) 197, 889, 912, 1036, 1092
DdeI CTNAG 5 cut(s) 96, 777, 792, 1108, 1379
DpnI GATC 6 cut(s) 66, 324, 345, 589, 773, 1113
DpnII GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
DraI TTTAAA 1 cut(s) 1186
DrdI GACNNNNNNGTC 1 cut(s) 1154
DseDI GACNNNNNNGTC 1 cut(s) 1154
EaeI YGGCCR 2 cut(s) 27, 474
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 2 cut(s) 789, 1183
EarI CTCTTC 2 cut(s) 789, 1183
EciI GGCGGA 1 cut(s) 1036
EclXI CGGCCG 1 cut(s) 474
Eco130I CCWWGG 3 cut(s) 79, 339, 1160
Eco147I AGGCCT 1 cut(s) 849
Eco24I GRGCYC 2 cut(s) 1068, 1101
Eco32I GATATC 1 cut(s) 1198
Eco47I GGWCC 4 cut(s) 488, 602, 949, 1373
Eco52I CGGCCG 1 cut(s) 474
Eco57I CTGAAG 1 cut(s) 747
EcoNI CCTNNNNNAGG 1 cut(s) 854
EcoO109I RGGNCCY 1 cut(s) 488
EcoRII CCWGG 2 cut(s) 450, 549
EcoRV GATATC 1 cut(s) 1198
EcoT14I CCWWGG 3 cut(s) 79, 339, 1160
EcoT38I GRGCYC 2 cut(s) 1068, 1101
ErhI CCWWGG 3 cut(s) 79, 339, 1160
Esp3I CGTCTC 1 cut(s) 730
FaeI CATG 5 cut(s) 343, 817, 937, 1288, 1426
FalI AAGNNNNNCTT 2 cut(s) 1385, 1417
FaqI GGGAC 3 cut(s) 551, 1142, 1336
FatI CATG 5 cut(s) 339, 813, 933, 1284, 1422
FblI GTMKAC 1 cut(s) 534
Fnu4HI GCNGC 4 cut(s) 15, 261, 1332, 1335
FokI GGATG 2 cut(s) 62, 434
FriOI GRGCYC 2 cut(s) 1068, 1101
Fsp4HI GCNGC 4 cut(s) 15, 261, 1332, 1335
FspBI CTAG 1 cut(s) 1344
GlaI GCGC 1 cut(s) 94
GluI GCNGC 4 cut(s) 15, 261, 1332, 1335
GsaI CCCAGC 1 cut(s) 279
GsuI CTGGAG 1 cut(s) 1254
HaeII RGCGCY 1 cut(s) 96
HaeIII GGCC 7 cut(s) 29, 188, 476, 554, 627, 849, 1280
HapII CCGG 1 cut(s) 477
HgaI GACGC 1 cut(s) 156
HhaI GCGC 1 cut(s) 95
Hin1II CATG 5 cut(s) 343, 817, 937, 1288, 1426
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HindIII AAGCTT 1 cut(s) 989
HinfI GANTC 5 cut(s) 115, 299, 721, 794, 1262
HpaII CCGG 1 cut(s) 477
HphI GGTGA 6 cut(s) 224, 251, 328, 1157, 1247, 1253
Hpy166II GTNNAC 4 cut(s) 433, 535, 679, 748
Hpy188I TCNGA 4 cut(s) 133, 316, 1195, 1436
Hpy188III TCNNGA 9 cut(s) 139, 171, 326, 718, 725, 791, 934, 985, 1271
Hpy8I GTNNAC 4 cut(s) 433, 535, 679, 748
Hpy99I CGWCG 3 cut(s) 290, 536, 772
HpyAV CCTTC 7 cut(s) 63, 319, 404, 850, 1232, 1309, 1313
HpyCH4III ACNGT 5 cut(s) 332, 683, 911, 930, 1456
HpyCH4IV ACGT 1 cut(s) 739
HpyCH4V TGCA 2 cut(s) 17, 224
HpyF10VI GCNNNNNNNGC 5 cut(s) 90, 266, 606, 692, 764
HpyF3I CTNAG 5 cut(s) 96, 777, 792, 1108, 1379
HpySE526I ACGT 1 cut(s) 739
Hsp92II CATG 5 cut(s) 343, 817, 937, 1288, 1426
HspAI GCGC 1 cut(s) 93
Kzo9I GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
LguI GCTCTTC 1 cut(s) 789
LmnI GCTCC 3 cut(s) 268, 1071, 1096
Lsp1109I GCAGC 2 cut(s) 247, 1343
LweI GCATC 4 cut(s) 205, 495, 881, 1199
MaeI CTAG 1 cut(s) 1344
MaeII ACGT 1 cut(s) 739
MaeIII GTNAC 4 cut(s) 239, 403, 941, 1145
MalI GATC 6 cut(s) 66, 324, 345, 589, 773, 1113
MbiI CCGCTC 1 cut(s) 1486
MboI GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
MboII GAAGA 9 cut(s) 74, 116, 433, 568, 740, 776, 820, 1170, 1328
MflI RGATCY 3 cut(s) 64, 343, 587
MhlI GDGCHC 2 cut(s) 1068, 1101
MluCI AATT 4 cut(s) 384, 822, 1025, 1102
MlyI GAGTC 2 cut(s) 308, 803
MseI TTAA 6 cut(s) 636, 921, 1167, 1185, 1247, 1311
MspA1I CMGCKG 2 cut(s) 275, 1334
MspI CCGG 1 cut(s) 477
MspR9I CCNGG 3 cut(s) 452, 478, 551
MvaI CCWGG 2 cut(s) 452, 551
MwoI GCNNNNNNNGC 5 cut(s) 90, 266, 606, 692, 764
NciI CCSGG 1 cut(s) 478
NcoI CCATGG 1 cut(s) 339
NdeII GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
NlaIII CATG 5 cut(s) 343, 817, 937, 1288, 1426
NlaIV GGNNCC 5 cut(s) 345, 489, 1067, 1098, 1279
NmuCI GTSAC 3 cut(s) 239, 941, 1145
PagI TCATGA 1 cut(s) 933
PceI AGGCCT 1 cut(s) 849
PciSI GCTCTTC 1 cut(s) 789
PcsI WCGNNNNNNNCGW 1 cut(s) 294
PfeI GAWTC 3 cut(s) 115, 721, 1262
PkrI GCNGC 4 cut(s) 16, 262, 1333, 1336
PleI GAGTC 2 cut(s) 307, 802
PpsI GAGTC 2 cut(s) 307, 802
PpuMI RGGWCCY 1 cut(s) 488
Psp5II RGGWCCY 1 cut(s) 488
Psp6I CCWGG 2 cut(s) 450, 549
PspFI CCCAGC 1 cut(s) 275
PspGI CCWGG 2 cut(s) 450, 549
PspN4I GGNNCC 5 cut(s) 345, 489, 1067, 1098, 1279
PspPI GGNCC 5 cut(s) 488, 602, 949, 1278, 1373
PspPPI RGGWCCY 1 cut(s) 488
PsrI GAACNNNNNNTAC 2 cut(s) 416, 448
PstNI CAGNNNCTG 1 cut(s) 1337
PsuI RGATCY 3 cut(s) 64, 343, 587
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 5 cut(s) 198, 890, 913, 1037, 1093
RsaNI GTAC 5 cut(s) 197, 889, 912, 1036, 1092
SalI GTCGAC 1 cut(s) 533
SapI GCTCTTC 1 cut(s) 789
SaqAI TTAA 6 cut(s) 636, 921, 1167, 1185, 1247, 1311
SatI GCNGC 4 cut(s) 15, 261, 1332, 1335
Sau3AI GATC 6 cut(s) 64, 322, 343, 587, 771, 1111
Sau96I GGNCC 5 cut(s) 488, 602, 949, 1278, 1373
SchI GAGTC 2 cut(s) 308, 803
ScrFI CCNGG 3 cut(s) 452, 478, 551
SduI GDGCHC 2 cut(s) 1068, 1101
SfaNI GCATC 4 cut(s) 205, 495, 881, 1199
SfcI CTRYAG 1 cut(s) 270
SinI GGWCC 4 cut(s) 488, 602, 949, 1373
SmlI CTYRAG 3 cut(s) 68, 518, 1202
SmoI CTYRAG 3 cut(s) 68, 518, 1202
Sse9I AATT 4 cut(s) 384, 822, 1025, 1102
SseBI AGGCCT 1 cut(s) 849
SsiI CCGC 4 cut(s) 600, 1021, 1334, 1484
SspMI CTAG 1 cut(s) 1344
StuI AGGCCT 1 cut(s) 849
StyD4I CCNGG 3 cut(s) 450, 476, 549
StyI CCWWGG 3 cut(s) 79, 339, 1160
TaaI ACNGT 5 cut(s) 332, 683, 911, 930, 1456
TaiI ACGT 1 cut(s) 742
TaqI TCGA 8 cut(s) 138, 419, 524, 534, 797, 875, 1114, 1488
TasI AATT 4 cut(s) 384, 822, 1025, 1102
TatI WGTACW 1 cut(s) 1035
TauI GCSGC 1 cut(s) 1337
TfiI GAWTC 3 cut(s) 115, 721, 1262
Tru1I TTAA 6 cut(s) 636, 921, 1167, 1185, 1247, 1311
Tru9I TTAA 6 cut(s) 636, 921, 1167, 1185, 1247, 1311
TscAI CASTG 2 cut(s) 688, 781
TseFI GTSAC 3 cut(s) 239, 941, 1145
TseI GCWGC 3 cut(s) 14, 260, 1331
Tsp45I GTSAC 3 cut(s) 239, 941, 1145
TspDTI ATGAA 8 cut(s) 17, 922, 983, 1280, 1291, 1329, 1411, 1453
TspGWI ACGGA 4 cut(s) 184, 520, 600, 1109
TspRI CASTG 2 cut(s) 688, 781
VpaK11BI GGWCC 4 cut(s) 488, 602, 949, 1373
XagI CCTNNNNNAGG 1 cut(s) 854
XapI RAATTY 1 cut(s) 1025
XmiI GTMKAC 1 cut(s) 534
XspI CTAG 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.