pycom02g14630

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
11228471 .. 11229078
608 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g14630.1

Sequence Viewer

Length: 513 bp
ATGGTGTACTCGCCGCTTTCAATCCACGTCGTGCTGAGTCTGATCGCGGCCGGTACAAAGGATCCCGCCGAGAAAGAGTTGCTTTCTTTCCTCAATGCCTATGGCGGGCCTTTTTTGTCCTTCGCCAATGGCCTCTGGGTTGACAAGTCGCTCCCTCTCAAGTCTTGTTTCAAAGAGGTGATGGACAGTTTTTACAAGGCGGCTCGAAAGGAAGTGGATTTCCAGACCAAGGCTGAAGAAGTGAGAGTTGAATCCGTAGGGGCCCGAAACGAGACTCGAGGCCTGATCAAAGAGGTTCTTTCTCCTGGGTCGGTTAACAGCATAACAAAGGCTCATCAATTTTGTGCCTTTCACCTTCTCAATGGCAGATCATCAGTTAAGGCATCCTGCATGACCGGCTACGAGGGCCAATATGTCGAAGCCCTTGACGGCTCCAAGACCTTAAAGCTCCGATACAGAAAAGGAAAGGCTGAGAAAGCTGAGTTTCTGCATGTGCTTGTTTCTTCCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

171

Amino Acids

18.67

Weight (kDa)

9.08

Isoelectric Point (pI)

23.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 38 - 111 2.6e-09 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 47
AccIII TCCGGA 1 cut(s) 506
AciI CCGC 5 cut(s) 14, 47, 66, 105, 200
AclWI GGATC 2 cut(s) 56, 69
AcoI YGGCCR 1 cut(s) 48
AcuI CTGAAG 1 cut(s) 255
AdeI CACNNNGTG 1 cut(s) 31
AfaI GTAC 2 cut(s) 8, 55
AfiI CCNNNNNNNGG 2 cut(s) 105, 229
AgsI TTSAA 3 cut(s) 21, 172, 251
AjiI CACGTC 1 cut(s) 28
AjnI CCWGG 1 cut(s) 304
AluBI AGCT 2 cut(s) 448, 479
AluI AGCT 2 cut(s) 448, 479
Alw26I GTCTC 1 cut(s) 266
AlwI GGATC 2 cut(s) 56, 69
Ama87I CYCGRG 1 cut(s) 276
Aor13HI TCCGGA 1 cut(s) 506
AoxI GGCC 6 cut(s) 48, 107, 130, 261, 280, 406
ApaI GGGCCC 1 cut(s) 265
AspS9I GGNCC 4 cut(s) 107, 261, 262, 406
AsuHPI GGTGA 2 cut(s) 190, 344
AvaI CYCGRG 1 cut(s) 276
BaeGI GKGCMC 1 cut(s) 265
BamHI GGATCC 1 cut(s) 61
BanII GRGCYC 1 cut(s) 265
BccI CCATC 1 cut(s) 175
BceAI ACGGC 1 cut(s) 445
BciT130I CCWGG 1 cut(s) 306
BclI TGATCA 1 cut(s) 285
BcoDI GTCTC 1 cut(s) 266
BisI GCNGC 3 cut(s) 14, 48, 201
BlsI GCNGC 3 cut(s) 15, 49, 202
Bme1390I CCNGG 1 cut(s) 306
BmeT110I CYCGRG 1 cut(s) 276
BmgBI CACGTC 1 cut(s) 28
BmgT120I GGNCC 4 cut(s) 107, 261, 262, 406
BmiI GGNNCC 4 cut(s) 63, 262, 263, 433
BmrFI CCNGG 1 cut(s) 306
BmsI GCATC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 143
BsaJI CCNNGG 2 cut(s) 228, 305
BsaWI WCCGGW 1 cut(s) 506
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 229
Bse118I RCCGGY 2 cut(s) 50, 395
BseAI TCCGGA 1 cut(s) 506
BseBI CCWGG 1 cut(s) 306
BseDI CCNNGG 2 cut(s) 228, 305
BseGI GGATG 1 cut(s) 383
BseLI CCNNNNNNNGG 2 cut(s) 105, 229
BseMII CTCAG 3 cut(s) 26, 462, 471
BseSI GKGCMC 1 cut(s) 265
BseX3I CGGCCG 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 47
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 6 cut(s) 50, 109, 132, 263, 282, 408
BsiEI CGRYCG 1 cut(s) 51
BsiHKCI CYCGRG 1 cut(s) 276
BsiSI CCGG 3 cut(s) 51, 396, 507
BslI CCNNNNNNNGG 2 cut(s) 105, 229
BsmAI GTCTC 1 cut(s) 266
BsnI GGCC 6 cut(s) 50, 109, 132, 263, 282, 408
BsoBI CYCGRG 1 cut(s) 276
Bsp120I GGGCCC 1 cut(s) 261
Bsp1286I GDGCHC 1 cut(s) 265
Bsp13I TCCGGA 1 cut(s) 506
Bsp143I GATC 4 cut(s) 42, 61, 285, 368
BspACI CCGC 5 cut(s) 14, 47, 66, 105, 200
BspANI GGCC 6 cut(s) 50, 109, 132, 263, 282, 408
BspCNI CTCAG 3 cut(s) 27, 463, 472
BspEI TCCGGA 1 cut(s) 506
BspFNI CGCG 1 cut(s) 47
BspLI GGNNCC 4 cut(s) 63, 262, 263, 433
BspPI GGATC 2 cut(s) 56, 69
BsrFI RCCGGY 2 cut(s) 50, 395
BssAI RCCGGY 2 cut(s) 50, 395
BssECI CCNNGG 2 cut(s) 228, 305
BssMI GATC 4 cut(s) 42, 61, 285, 368
BssT1I CCWWGG 1 cut(s) 228
Bst2UI CCWGG 1 cut(s) 306
Bst4CI ACNGT 1 cut(s) 188
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 3 cut(s) 35, 471, 480
BstF5I GGATG 1 cut(s) 383
BstFNI CGCG 1 cut(s) 47
BstKTI GATC 4 cut(s) 45, 64, 288, 371
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 4 cut(s) 42, 61, 285, 368
BstMCI CGRYCG 1 cut(s) 51
BstMWI GCNNNNNNNGC 3 cut(s) 396, 405, 476
BstNI CCWGG 1 cut(s) 306
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 1 cut(s) 304
BstSLI GKGCMC 1 cut(s) 265
BstUI CGCG 1 cut(s) 47
BstX2I RGATCY 1 cut(s) 61
BstYI RGATCY 1 cut(s) 61
BstZI CGGCCG 1 cut(s) 48
BsuRI GGCC 6 cut(s) 50, 109, 132, 263, 282, 408
BtrI CACGTC 1 cut(s) 28
BtsCI GGATG 1 cut(s) 383
Cac8I GCNNGC 1 cut(s) 107
Cfr10I RCCGGY 2 cut(s) 50, 395
Cfr13I GGNCC 4 cut(s) 107, 261, 262, 406
Csp6I GTAC 2 cut(s) 7, 54
CviAII CATG 2 cut(s) 391, 491
CviQI GTAC 2 cut(s) 7, 54
DdeI CTNAG 3 cut(s) 35, 471, 480
DpnI GATC 4 cut(s) 44, 63, 287, 370
DpnII GATC 4 cut(s) 42, 61, 285, 368
DraIII CACNNNGTG 1 cut(s) 31
EaeI YGGCCR 1 cut(s) 48
EagI CGGCCG 1 cut(s) 48
EclXI CGGCCG 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 228
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 265
Eco52I CGGCCG 1 cut(s) 48
Eco57I CTGAAG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 276
EcoO109I RGGNCCY 1 cut(s) 261
EcoRII CCWGG 1 cut(s) 304
EcoT14I CCWWGG 1 cut(s) 228
EcoT38I GRGCYC 1 cut(s) 265
ErhI CCWWGG 1 cut(s) 228
FaeI CATG 2 cut(s) 394, 494
FaiI YATR 5 cut(s) 102, 323, 392, 414, 492
FalI AAGNNNNNCTT 4 cut(s) 66, 98, 282, 314
FatI CATG 2 cut(s) 390, 490
FauI CCCGC 2 cut(s) 73, 98
FbaI TGATCA 1 cut(s) 285
Fnu4HI GCNGC 3 cut(s) 14, 48, 201
FokI GGATG 1 cut(s) 370
FriOI GRGCYC 1 cut(s) 265
Fsp4HI GCNGC 3 cut(s) 14, 48, 201
GluI GCNGC 3 cut(s) 14, 48, 201
HaeIII GGCC 6 cut(s) 50, 109, 132, 263, 282, 408
HapII CCGG 3 cut(s) 51, 396, 507
Hin1II CATG 2 cut(s) 394, 494
HincII GTYRAC 2 cut(s) 142, 316
HindII GTYRAC 2 cut(s) 142, 316
HinfI GANTC 3 cut(s) 37, 251, 274
HpaI GTTAAC 1 cut(s) 316
HpaII CCGG 3 cut(s) 51, 396, 507
HphI GGTGA 2 cut(s) 190, 344
Hpy166II GTNNAC 3 cut(s) 7, 142, 316
Hpy188I TCNGA 2 cut(s) 42, 452
Hpy188III TCNNGA 2 cut(s) 223, 507
Hpy8I GTNNAC 3 cut(s) 7, 142, 316
Hpy99I CGWCG 1 cut(s) 32
HpyAV CCTTC 2 cut(s) 130, 365
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 1 cut(s) 27
HpyCH4V TGCA 2 cut(s) 390, 490
HpyF10VI GCNNNNNNNGC 3 cut(s) 396, 405, 476
HpyF3I CTNAG 3 cut(s) 35, 471, 480
HpySE526I ACGT 1 cut(s) 27
Hsp92II CATG 2 cut(s) 394, 494
Kpn2I TCCGGA 1 cut(s) 506
Ksp22I TGATCA 1 cut(s) 285
KspAI GTTAAC 1 cut(s) 316
Kzo9I GATC 4 cut(s) 42, 61, 285, 368
LmnI GCTCC 3 cut(s) 156, 437, 453
LpnPI CCDG 8 cut(s) 64, 121, 236, 291, 296, 318, 400, 409
LweI GCATC 1 cut(s) 392
MaeII ACGT 1 cut(s) 27
MalI GATC 4 cut(s) 44, 63, 287, 370
MboI GATC 4 cut(s) 42, 61, 285, 368
MboII GAAGA 2 cut(s) 248, 495
MflI RGATCY 1 cut(s) 61
MhlI GDGCHC 1 cut(s) 265
MluCI AATT 1 cut(s) 338
MlyI GAGTC 2 cut(s) 46, 268
MnlI CCTC 7 cut(s) 101, 143, 165, 169, 272, 286, 397
MroI TCCGGA 1 cut(s) 506
MseI TTAA 3 cut(s) 315, 378, 443
MspI CCGG 3 cut(s) 51, 396, 507
MspR9I CCNGG 1 cut(s) 306
MvaI CCWGG 1 cut(s) 306
MvnI CGCG 1 cut(s) 47
MwoI GCNNNNNNNGC 3 cut(s) 396, 405, 476
NdeII GATC 4 cut(s) 42, 61, 285, 368
NlaIII CATG 2 cut(s) 394, 494
NlaIV GGNNCC 4 cut(s) 63, 262, 263, 433
NmeAIII GCCGAG 1 cut(s) 94
NspI RCATGY 1 cut(s) 494
PaeR7I CTCGAG 1 cut(s) 276
PceI AGGCCT 1 cut(s) 282
PfeI GAWTC 1 cut(s) 251
PkrI GCNGC 3 cut(s) 15, 49, 202
PleI GAGTC 2 cut(s) 45, 268
PpsI GAGTC 2 cut(s) 45, 268
Psp6I CCWGG 1 cut(s) 304
PspGI CCWGG 1 cut(s) 304
PspN4I GGNNCC 4 cut(s) 63, 262, 263, 433
PspOMI GGGCCC 1 cut(s) 261
PspPI GGNCC 4 cut(s) 107, 261, 262, 406
PspXI VCTCGAGB 1 cut(s) 276
PsuI RGATCY 1 cut(s) 61
RsaI GTAC 2 cut(s) 8, 55
RsaNI GTAC 2 cut(s) 7, 54
SaqAI TTAA 3 cut(s) 315, 378, 443
SatI GCNGC 3 cut(s) 14, 48, 201
Sau3AI GATC 4 cut(s) 42, 61, 285, 368
Sau96I GGNCC 4 cut(s) 107, 261, 262, 406
SchI GAGTC 2 cut(s) 46, 268
ScrFI CCNGG 1 cut(s) 306
SduI GDGCHC 1 cut(s) 265
SetI ASST 7 cut(s) 30, 180, 297, 357, 443, 450, 481
SfaNI GCATC 1 cut(s) 392
Sfr274I CTCGAG 1 cut(s) 276
SlaI CTCGAG 1 cut(s) 276
SmlI CTYRAG 2 cut(s) 158, 276
SmoI CTYRAG 2 cut(s) 158, 276
Sse9I AATT 1 cut(s) 338
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 5 cut(s) 14, 47, 66, 105, 200
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 304
StyI CCWWGG 1 cut(s) 228
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 1 cut(s) 30
TaqI TCGA 3 cut(s) 205, 277, 417
TasI AATT 1 cut(s) 338
TatI WGTACW 1 cut(s) 6
TauI GCSGC 3 cut(s) 16, 50, 203
TfiI GAWTC 1 cut(s) 251
Tru1I TTAA 3 cut(s) 315, 378, 443
Tru9I TTAA 3 cut(s) 315, 378, 443
TspGWI ACGGA 1 cut(s) 244
XceI RCATGY 1 cut(s) 494
XhoI CTCGAG 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.